EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000013945 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-13a21.4
Alias: zgc:110195
Full Name: si:dkey-13a21.4
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 3560 bases
Position: chr6:20717221-20720780
Accession: ZDB-GENE-040724-163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000022826	MMR_HSR1	PF01926.23	8.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000023088	-	1498	-	ENSSMAP00000022826	206 (aa)	-	A0A2U9BH93

Gene Model

Click here to download ENSSMAG00000013945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000013945's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000013945	si:dkey-13a21.4	87	33.880	ENSSMAG00000004343	rab34a	67	33.880
ENSSMAG00000013945	si:dkey-13a21.4	82	35.503	ENSSMAG00000004922	rab11bb	76	35.503
ENSSMAG00000013945	si:dkey-13a21.4	80	36.364	ENSSMAG00000006341	rab23	80	36.310
ENSSMAG00000013945	si:dkey-13a21.4	79	30.909	ENSSMAG00000004806	si:ch73-116o1.2	75	31.875
ENSSMAG00000013945	si:dkey-13a21.4	79	35.976	ENSSMAG00000020311	rab42a	74	35.976
ENSSMAG00000013945	si:dkey-13a21.4	78	37.654	ENSSMAG00000021049	-	78	37.654
ENSSMAG00000013945	si:dkey-13a21.4	77	32.919	ENSSMAG00000000032	dnajc27	59	32.919
ENSSMAG00000013945	si:dkey-13a21.4	58	36.667	ENSSMAG00000004606	rabl2	52	36.667
ENSSMAG00000013945	si:dkey-13a21.4	83	32.370	ENSSMAG00000005651	-	80	32.370
ENSSMAG00000013945	si:dkey-13a21.4	79	39.264	ENSSMAG00000001002	rab2a	75	39.264
ENSSMAG00000013945	si:dkey-13a21.4	78	37.037	ENSSMAG00000009201	rab1ba	79	37.037
ENSSMAG00000013945	si:dkey-13a21.4	84	33.333	ENSSMAG00000020045	rab36	66	33.333
ENSSMAG00000013945	si:dkey-13a21.4	83	36.471	ENSSMAG00000011769	si:dkey-16l2.16	74	36.471
ENSSMAG00000013945	si:dkey-13a21.4	94	34.536	ENSSMAG00000010140	rab22a	97	34.536
ENSSMAG00000013945	si:dkey-13a21.4	76	37.725	ENSSMAG00000012178	-	67	37.725
ENSSMAG00000013945	si:dkey-13a21.4	79	36.196	ENSSMAG00000018454	-	74	36.196
ENSSMAG00000013945	si:dkey-13a21.4	85	40.909	ENSSMAG00000002500	rab30	86	40.909
ENSSMAG00000013945	si:dkey-13a21.4	95	31.731	ENSSMAG00000003166	rab14	95	31.731
ENSSMAG00000013945	si:dkey-13a21.4	91	32.984	ENSSMAG00000017205	-	89	32.984
ENSSMAG00000013945	si:dkey-13a21.4	78	38.889	ENSSMAG00000004416	-	74	38.889
ENSSMAG00000013945	si:dkey-13a21.4	82	52.941	ENSSMAG00000006709	rab9b	82	52.941
ENSSMAG00000013945	si:dkey-13a21.4	91	34.031	ENSSMAG00000000335	rab6bb	89	34.031
ENSSMAG00000013945	si:dkey-13a21.4	77	38.365	ENSSMAG00000016183	rab25b	73	38.365
ENSSMAG00000013945	si:dkey-13a21.4	80	50.299	ENSSMAG00000017426	rab9a	78	50.299
ENSSMAG00000013945	si:dkey-13a21.4	83	34.104	ENSSMAG00000019773	rab15	79	34.104
ENSSMAG00000013945	si:dkey-13a21.4	95	34.483	ENSSMAG00000013733	rab33a	73	34.483
ENSSMAG00000013945	si:dkey-13a21.4	78	34.969	ENSSMAG00000019926	rab34b	68	34.969
ENSSMAG00000013945	si:dkey-13a21.4	83	39.181	ENSSMAG00000000660	rab35b	83	39.181
ENSSMAG00000013945	si:dkey-13a21.4	82	35.503	ENSSMAG00000018613	-	76	35.503
ENSSMAG00000013945	si:dkey-13a21.4	83	37.209	ENSSMAG00000016376	-	84	37.209
ENSSMAG00000013945	si:dkey-13a21.4	99	35.071	ENSSMAG00000015774	rab41	98	35.071
ENSSMAG00000013945	si:dkey-13a21.4	76	30.625	ENSSMAG00000014329	si:cabz01085950.1	78	30.625
ENSSMAG00000013945	si:dkey-13a21.4	86	36.313	ENSSMAG00000009229	rab5aa	83	36.313
ENSSMAG00000013945	si:dkey-13a21.4	76	37.500	ENSSMAG00000016206	rab11al	71	37.500
ENSSMAG00000013945	si:dkey-13a21.4	80	37.126	ENSSMAG00000012678	rab12	65	38.272
ENSSMAG00000013945	si:dkey-13a21.4	78	36.196	ENSSMAG00000015955	rab33ba	68	36.196
ENSSMAG00000013945	si:dkey-13a21.4	85	35.795	ENSSMAG00000002569	-	83	35.795
ENSSMAG00000013945	si:dkey-13a21.4	80	36.747	ENSSMAG00000017528	rab1ab	81	37.349
ENSSMAG00000013945	si:dkey-13a21.4	78	38.509	ENSSMAG00000009722	rab25a	74	38.509
ENSSMAG00000013945	si:dkey-13a21.4	79	53.659	ENSSMAG00000014078	RAB9A	82	53.659
ENSSMAG00000013945	si:dkey-13a21.4	79	35.366	ENSSMAG00000001953	rab39bb	76	35.366
ENSSMAG00000013945	si:dkey-13a21.4	81	37.791	ENSSMAG00000002229	zgc:101559	72	37.791
ENSSMAG00000013945	si:dkey-13a21.4	90	55.914	ENSSMAG00000001414	-	79	55.914
ENSSMAG00000013945	si:dkey-13a21.4	77	41.772	ENSSMAG00000011814	rab18b	76	41.772
ENSSMAG00000013945	si:dkey-13a21.4	79	39.264	ENSSMAG00000007323	rab5c	72	39.264
ENSSMAG00000013945	si:dkey-13a21.4	84	38.202	ENSSMAG00000002969	rab18a	85	38.202
ENSSMAG00000013945	si:dkey-13a21.4	95	32.353	ENSSMAG00000004133	rab11a	93	32.353
ENSSMAG00000013945	si:dkey-13a21.4	83	30.286	ENSSMAG00000008745	hrasb	96	31.183
ENSSMAG00000013945	si:dkey-13a21.4	98	50.971	ENSSMAG00000011579	RAB7A	99	50.971

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000013945	si:dkey-13a21.4	96	84.343	ENSACIG00000011024	si:dkey-13a21.4	97	84.343	Amphilophus_citrinellus
ENSSMAG00000013945	si:dkey-13a21.4	96	84.848	ENSAOCG00000020491	si:dkey-13a21.4	97	84.848	Amphiprion_ocellaris
ENSSMAG00000013945	si:dkey-13a21.4	96	84.343	ENSAPEG00000023338	si:dkey-13a21.4	90	84.343	Amphiprion_percula
ENSSMAG00000013945	si:dkey-13a21.4	100	79.612	ENSATEG00000014958	si:dkey-13a21.4	100	79.612	Anabas_testudineus
ENSSMAG00000013945	si:dkey-13a21.4	95	51.282	ENSACAG00000012345	-	97	51.282	Anolis_carolinensis
ENSSMAG00000013945	si:dkey-13a21.4	100	81.553	ENSACLG00000021109	si:dkey-13a21.4	100	81.553	Astatotilapia_calliptera
ENSSMAG00000013945	si:dkey-13a21.4	95	52.970	ENSAMXG00000032663	si:dkey-13a21.4	93	52.970	Astyanax_mexicanus
ENSSMAG00000013945	si:dkey-13a21.4	83	58.621	WBGene00004271	rab-7	96	53.000	Caenorhabditis_elegans
ENSSMAG00000013945	si:dkey-13a21.4	97	83.417	ENSCVAG00000001150	si:dkey-13a21.4	98	83.417	Cyprinodon_variegatus
ENSSMAG00000013945	si:dkey-13a21.4	95	62.051	ENSDARG00000026098	si:dkey-13a21.4	95	62.051	Danio_rerio
ENSSMAG00000013945	si:dkey-13a21.4	88	52.717	ENSDNOG00000043559	-	96	50.505	Dasypus_novemcinctus
ENSSMAG00000013945	si:dkey-13a21.4	100	79.126	ENSFHEG00000002502	si:dkey-13a21.4	100	79.126	Fundulus_heteroclitus
ENSSMAG00000013945	si:dkey-13a21.4	99	79.803	ENSGAFG00000020102	si:dkey-13a21.4	99	79.803	Gambusia_affinis
ENSSMAG00000013945	si:dkey-13a21.4	100	82.039	ENSHBUG00000014023	si:dkey-13a21.4	100	82.039	Haplochromis_burtoni
ENSSMAG00000013945	si:dkey-13a21.4	86	77.528	ENSKMAG00000021039	si:dkey-13a21.4	74	77.528	Kryptolebias_marmoratus
ENSSMAG00000013945	si:dkey-13a21.4	96	81.313	ENSLBEG00000018180	si:dkey-13a21.4	97	81.313	Labrus_bergylta
ENSSMAG00000013945	si:dkey-13a21.4	95	60.406	ENSLOCG00000014749	si:dkey-13a21.4	96	60.406	Lepisosteus_oculatus
ENSSMAG00000013945	si:dkey-13a21.4	86	53.672	ENSLAFG00000028984	-	86	53.672	Loxodonta_africana
ENSSMAG00000013945	si:dkey-13a21.4	98	84.577	ENSMAMG00000021095	si:dkey-13a21.4	99	84.577	Mastacembelus_armatus
ENSSMAG00000013945	si:dkey-13a21.4	97	84.422	ENSMZEG00005010220	si:dkey-13a21.4	97	84.422	Maylandia_zebra
ENSSMAG00000013945	si:dkey-13a21.4	100	82.039	ENSNBRG00000023214	si:dkey-13a21.4	100	82.039	Neolamprologus_brichardi
ENSSMAG00000013945	si:dkey-13a21.4	97	84.925	ENSONIG00000020296	si:dkey-13a21.4	98	84.925	Oreochromis_niloticus
ENSSMAG00000013945	si:dkey-13a21.4	100	76.214	ENSORLG00000025098	si:dkey-13a21.4	100	76.214	Oryzias_latipes
ENSSMAG00000013945	si:dkey-13a21.4	100	76.699	ENSORLG00020019465	si:dkey-13a21.4	100	76.699	Oryzias_latipes_hni
ENSSMAG00000013945	si:dkey-13a21.4	100	76.699	ENSORLG00015015121	si:dkey-13a21.4	100	76.699	Oryzias_latipes_hsok
ENSSMAG00000013945	si:dkey-13a21.4	98	61.275	ENSPKIG00000008691	si:dkey-13a21.4	96	62.944	Paramormyrops_kingsleyae
ENSSMAG00000013945	si:dkey-13a21.4	96	74.747	ENSPMGG00000023170	si:dkey-13a21.4	94	74.747	Periophthalmus_magnuspinnatus
ENSSMAG00000013945	si:dkey-13a21.4	99	80.296	ENSPFOG00000015409	si:dkey-13a21.4	99	80.296	Poecilia_formosa
ENSSMAG00000013945	si:dkey-13a21.4	99	80.296	ENSPLAG00000019688	si:dkey-13a21.4	99	80.296	Poecilia_latipinna
ENSSMAG00000013945	si:dkey-13a21.4	99	80.296	ENSPMEG00000019159	si:dkey-13a21.4	99	80.296	Poecilia_mexicana
ENSSMAG00000013945	si:dkey-13a21.4	96	80.808	ENSPREG00000022241	si:dkey-13a21.4	97	80.808	Poecilia_reticulata
ENSSMAG00000013945	si:dkey-13a21.4	100	81.553	ENSPNYG00000018613	si:dkey-13a21.4	100	81.553	Pundamilia_nyererei
ENSSMAG00000013945	si:dkey-13a21.4	95	46.269	YML001W	YPT7	96	46.269	Saccharomyces_cerevisiae
ENSSMAG00000013945	si:dkey-13a21.4	95	63.265	ENSSFOG00015009566	si:dkey-13a21.4	96	63.265	Scleropages_formosus
ENSSMAG00000013945	si:dkey-13a21.4	97	87.940	ENSSDUG00000019738	si:dkey-13a21.4	98	87.940	Seriola_dumerili
ENSSMAG00000013945	si:dkey-13a21.4	96	86.869	ENSSLDG00000011597	si:dkey-13a21.4	97	86.869	Seriola_lalandi_dorsalis
ENSSMAG00000013945	si:dkey-13a21.4	95	51.795	ENSXETG00000014257	mgc75872	97	51.795	Xenopus_tropicalis