EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000013977 (Gene tree)
Gene ID: -
Gene Symbol: sf3b1
Alias: tst|wu:fb99f09
Full Name: splicing factor 3b%2C subunit 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 13124 bases
Position: chr14:21439799-21452922
Accession: ZDB-GENE-040827-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000022932	SF3b1	PF08920.10	6.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000023195	-	4095	-	ENSSMAP00000022932	1332 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000013977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000013977's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000013977	sf3b1	99	92.803	ENSG00000115524	SF3B1	99	92.955	Homo_sapiens
ENSSMAG00000013977	sf3b1	99	97.800	ENSAPOG00000011894	sf3b1	99	97.800	Acanthochromis_polyacanthus
ENSSMAG00000013977	sf3b1	98	92.683	ENSAMEG00000013809	SF3B1	99	92.835	Ailuropoda_melanoleuca
ENSSMAG00000013977	sf3b1	99	96.737	ENSACIG00000020910	sf3b1	96	96.737	Amphilophus_citrinellus
ENSSMAG00000013977	sf3b1	99	97.800	ENSAOCG00000004478	sf3b1	99	97.800	Amphiprion_ocellaris
ENSSMAG00000013977	sf3b1	99	97.800	ENSAPEG00000012937	sf3b1	99	97.800	Amphiprion_percula
ENSSMAG00000013977	sf3b1	99	97.800	ENSATEG00000020435	sf3b1	99	97.800	Anabas_testudineus
ENSSMAG00000013977	sf3b1	98	93.048	ENSAPLG00000003993	SF3B1	99	92.972	Anas_platyrhynchos
ENSSMAG00000013977	sf3b1	99	92.949	ENSACAG00000009612	SF3B1	99	92.873	Anolis_carolinensis
ENSSMAG00000013977	sf3b1	99	92.803	ENSANAG00000021577	SF3B1	99	94.364	Aotus_nancymaae
ENSSMAG00000013977	sf3b1	99	96.813	ENSACLG00000023470	sf3b1	99	96.813	Astatotilapia_calliptera
ENSSMAG00000013977	sf3b1	99	96.816	ENSAMXG00000002219	sf3b1	99	96.816	Astyanax_mexicanus
ENSSMAG00000013977	sf3b1	99	92.803	ENSBTAG00000008915	SF3B1	99	92.955	Bos_taurus
ENSSMAG00000013977	sf3b1	97	64.622	WBGene00011605	sftb-1	97	64.697	Caenorhabditis_elegans
ENSSMAG00000013977	sf3b1	99	92.803	ENSCJAG00000003902	SF3B1	99	92.955	Callithrix_jacchus
ENSSMAG00000013977	sf3b1	99	92.803	ENSCAFG00000010826	SF3B1	99	92.955	Canis_familiaris
ENSSMAG00000013977	sf3b1	99	92.803	ENSCAFG00020004750	SF3B1	99	92.955	Canis_lupus_dingo
ENSSMAG00000013977	sf3b1	99	92.803	ENSCHIG00000015226	SF3B1	99	92.955	Capra_hircus
ENSSMAG00000013977	sf3b1	99	92.727	ENSTSYG00000009214	SF3B1	99	92.879	Carlito_syrichta
ENSSMAG00000013977	sf3b1	98	92.629	ENSCAPG00000006547	SF3B1	99	92.781	Cavia_aperea
ENSSMAG00000013977	sf3b1	98	92.748	ENSCPOG00000009353	SF3B1	99	92.901	Cavia_porcellus
ENSSMAG00000013977	sf3b1	99	92.803	ENSCCAG00000020506	SF3B1	99	92.955	Cebus_capucinus
ENSSMAG00000013977	sf3b1	99	92.803	ENSCATG00000035735	SF3B1	99	92.955	Cercocebus_atys
ENSSMAG00000013977	sf3b1	98	92.754	ENSCLAG00000014767	SF3B1	99	92.906	Chinchilla_lanigera
ENSSMAG00000013977	sf3b1	99	92.803	ENSCSAG00000011505	SF3B1	99	92.955	Chlorocebus_sabaeus
ENSSMAG00000013977	sf3b1	82	92.588	ENSCHOG00000009860	SF3B1	75	92.588	Choloepus_hoffmanni
ENSSMAG00000013977	sf3b1	99	93.171	ENSCPBG00000021902	SF3B1	99	94.542	Chrysemys_picta_bellii
ENSSMAG00000013977	sf3b1	68	77.874	ENSCING00000002558	-	99	78.094	Ciona_intestinalis
ENSSMAG00000013977	sf3b1	99	79.880	ENSCSAVG00000002559	-	99	79.730	Ciona_savignyi
ENSSMAG00000013977	sf3b1	99	92.803	ENSCANG00000029415	SF3B1	99	92.955	Colobus_angolensis_palliatus
ENSSMAG00000013977	sf3b1	99	92.803	ENSCGRG00001016990	Sf3b1	99	92.955	Cricetulus_griseus_chok1gshd
ENSSMAG00000013977	sf3b1	99	92.803	ENSCGRG00000005301	Sf3b1	99	92.955	Cricetulus_griseus_crigri
ENSSMAG00000013977	sf3b1	99	93.778	ENSCSEG00000003860	sf3b1	99	93.778	Cynoglossus_semilaevis
ENSSMAG00000013977	sf3b1	95	97.557	ENSCVAG00000003680	sf3b1	99	97.557	Cyprinodon_variegatus
ENSSMAG00000013977	sf3b1	99	95.372	ENSDARG00000056138	sf3b1	99	95.296	Danio_rerio
ENSSMAG00000013977	sf3b1	99	92.733	ENSDNOG00000011754	SF3B1	99	92.884	Dasypus_novemcinctus
ENSSMAG00000013977	sf3b1	98	90.916	ENSDORG00000002399	Sf3b1	99	90.840	Dipodomys_ordii
ENSSMAG00000013977	sf3b1	99	75.918	FBgn0031266	Sf3b1	99	76.065	Drosophila_melanogaster
ENSSMAG00000013977	sf3b1	82	91.431	ENSETEG00000009188	SF3B1	100	91.613	Echinops_telfairi
ENSSMAG00000013977	sf3b1	98	85.616	ENSEBUG00000004325	sf3b1	99	88.296	Eptatretus_burgeri
ENSSMAG00000013977	sf3b1	99	92.803	ENSEASG00005020159	SF3B1	97	92.955	Equus_asinus_asinus
ENSSMAG00000013977	sf3b1	99	92.803	ENSECAG00000021657	SF3B1	97	92.955	Equus_caballus
ENSSMAG00000013977	sf3b1	86	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSSMAG00000013977	sf3b1	99	95.921	ENSELUG00000005977	sf3b1	98	95.997	Esox_lucius
ENSSMAG00000013977	sf3b1	99	92.803	ENSFCAG00000005038	SF3B1	99	92.955	Felis_catus
ENSSMAG00000013977	sf3b1	98	92.972	ENSFALG00000004281	SF3B1	99	92.895	Ficedula_albicollis
ENSSMAG00000013977	sf3b1	99	92.803	ENSFDAG00000017510	SF3B1	99	92.955	Fukomys_damarensis
ENSSMAG00000013977	sf3b1	99	96.662	ENSFHEG00000014333	sf3b1	99	96.662	Fundulus_heteroclitus
ENSSMAG00000013977	sf3b1	99	96.288	ENSGMOG00000006773	sf3b1	99	96.288	Gadus_morhua
ENSSMAG00000013977	sf3b1	99	93.096	ENSGALG00000008038	SF3B1	99	93.020	Gallus_gallus
ENSSMAG00000013977	sf3b1	99	95.448	ENSGAFG00000000704	sf3b1	99	97.381	Gambusia_affinis
ENSSMAG00000013977	sf3b1	99	97.121	ENSGACG00000008839	sf3b1	99	97.121	Gasterosteus_aculeatus
ENSSMAG00000013977	sf3b1	99	92.540	ENSGAGG00000017478	SF3B1	99	92.540	Gopherus_agassizii
ENSSMAG00000013977	sf3b1	99	87.291	ENSGGOG00000009264	SF3B1	99	87.796	Gorilla_gorilla
ENSSMAG00000013977	sf3b1	99	96.813	ENSHBUG00000007705	sf3b1	99	96.813	Haplochromis_burtoni
ENSSMAG00000013977	sf3b1	98	92.754	ENSHGLG00000008285	-	99	92.906	Heterocephalus_glaber_female
ENSSMAG00000013977	sf3b1	98	90.770	ENSHGLG00100005535	-	99	90.923	Heterocephalus_glaber_male
ENSSMAG00000013977	sf3b1	99	97.803	ENSHCOG00000016775	sf3b1	99	97.803	Hippocampus_comes
ENSSMAG00000013977	sf3b1	99	96.889	ENSIPUG00000013171	sf3b1	99	96.889	Ictalurus_punctatus
ENSSMAG00000013977	sf3b1	99	92.803	ENSSTOG00000011034	SF3B1	99	92.955	Ictidomys_tridecemlineatus
ENSSMAG00000013977	sf3b1	98	92.726	ENSJJAG00000010903	Sf3b1	99	92.879	Jaculus_jaculus
ENSSMAG00000013977	sf3b1	99	97.420	ENSKMAG00000004009	sf3b1	99	97.420	Kryptolebias_marmoratus
ENSSMAG00000013977	sf3b1	99	97.344	ENSLBEG00000022208	sf3b1	99	97.344	Labrus_bergylta
ENSSMAG00000013977	sf3b1	98	90.791	ENSLACG00000014832	SF3B1	99	90.715	Latimeria_chalumnae
ENSSMAG00000013977	sf3b1	99	94.792	ENSLOCG00000003899	sf3b1	99	94.717	Lepisosteus_oculatus
ENSSMAG00000013977	sf3b1	99	92.803	ENSLAFG00000001956	SF3B1	99	92.955	Loxodonta_africana
ENSSMAG00000013977	sf3b1	98	92.754	ENSMMUG00000022430	SF3B1	99	92.906	Macaca_mulatta
ENSSMAG00000013977	sf3b1	99	92.803	ENSMNEG00000042333	SF3B1	99	94.364	Macaca_nemestrina
ENSSMAG00000013977	sf3b1	93	88.424	ENSMLEG00000026141	SF3B1	98	88.835	Mandrillus_leucophaeus
ENSSMAG00000013977	sf3b1	99	97.951	ENSMAMG00000010241	sf3b1	99	97.951	Mastacembelus_armatus
ENSSMAG00000013977	sf3b1	99	96.813	ENSMZEG00005021254	sf3b1	99	96.813	Maylandia_zebra
ENSSMAG00000013977	sf3b1	98	92.437	ENSMGAG00000007017	SF3B1	99	92.361	Meleagris_gallopavo
ENSSMAG00000013977	sf3b1	98	88.558	ENSMAUG00000009071	Sf3b1	99	88.711	Mesocricetus_auratus
ENSSMAG00000013977	sf3b1	99	92.803	ENSMICG00000013879	SF3B1	99	92.955	Microcebus_murinus
ENSSMAG00000013977	sf3b1	98	88.491	ENSMOCG00000000455	Sf3b1	99	88.491	Microtus_ochrogaster
ENSSMAG00000013977	sf3b1	83	97.197	ENSMMOG00000000475	sf3b1	100	97.197	Mola_mola
ENSSMAG00000013977	sf3b1	99	92.273	ENSMODG00000012275	SF3B1	99	92.348	Monodelphis_domestica
ENSSMAG00000013977	sf3b1	99	97.876	ENSMALG00000017211	sf3b1	99	97.876	Monopterus_albus
ENSSMAG00000013977	sf3b1	99	92.803	MGP_CAROLIEiJ_G0014141	Sf3b1	99	92.955	Mus_caroli
ENSSMAG00000013977	sf3b1	99	92.803	ENSMUSG00000025982	Sf3b1	99	92.955	Mus_musculus
ENSSMAG00000013977	sf3b1	99	92.803	MGP_SPRETEiJ_G0014947	Sf3b1	99	92.955	Mus_spretus
ENSSMAG00000013977	sf3b1	99	92.803	ENSMPUG00000007799	SF3B1	99	92.955	Mustela_putorius_furo
ENSSMAG00000013977	sf3b1	99	91.667	ENSMLUG00000000840	SF3B1	99	91.818	Myotis_lucifugus
ENSSMAG00000013977	sf3b1	99	92.477	ENSNGAG00000021884	-	99	92.629	Nannospalax_galili
ENSSMAG00000013977	sf3b1	99	91.900	ENSNBRG00000015816	sf3b1	99	91.964	Neolamprologus_brichardi
ENSSMAG00000013977	sf3b1	99	92.803	ENSNLEG00000006861	SF3B1	99	92.955	Nomascus_leucogenys
ENSSMAG00000013977	sf3b1	69	99.717	ENSMEUG00000015848	-	66	99.717	Notamacropus_eugenii
ENSSMAG00000013977	sf3b1	99	80.282	ENSOPRG00000008596	SF3B1	99	80.578	Ochotona_princeps
ENSSMAG00000013977	sf3b1	99	92.803	ENSODEG00000011153	-	99	92.955	Octodon_degus
ENSSMAG00000013977	sf3b1	99	96.813	ENSONIG00000013758	sf3b1	99	96.813	Oreochromis_niloticus
ENSSMAG00000013977	sf3b1	81	96.115	ENSOCUG00000012722	-	95	96.115	Oryctolagus_cuniculus
ENSSMAG00000013977	sf3b1	99	96.737	ENSORLG00000020219	sf3b1	99	96.737	Oryzias_latipes
ENSSMAG00000013977	sf3b1	99	96.737	ENSORLG00020001746	sf3b1	99	96.737	Oryzias_latipes_hni
ENSSMAG00000013977	sf3b1	64	95.176	ENSORLG00015001759	sf3b1	98	95.176	Oryzias_latipes_hsok
ENSSMAG00000013977	sf3b1	99	96.965	ENSOMEG00000019231	sf3b1	99	96.965	Oryzias_melastigma
ENSSMAG00000013977	sf3b1	99	92.803	ENSOARG00000015374	SF3B1	99	92.955	Ovis_aries
ENSSMAG00000013977	sf3b1	99	92.803	ENSPPAG00000035007	SF3B1	99	92.955	Pan_paniscus
ENSSMAG00000013977	sf3b1	99	92.803	ENSPPRG00000009090	SF3B1	99	92.955	Panthera_pardus
ENSSMAG00000013977	sf3b1	99	92.803	ENSPTIG00000021557	SF3B1	99	92.955	Panthera_tigris_altaica
ENSSMAG00000013977	sf3b1	98	85.388	ENSPTRG00000012771	SF3B1	99	85.540	Pan_troglodytes
ENSSMAG00000013977	sf3b1	99	92.803	ENSPANG00000013417	SF3B1	99	92.955	Papio_anubis
ENSSMAG00000013977	sf3b1	99	95.754	ENSPKIG00000000784	sf3b1	99	95.754	Paramormyrops_kingsleyae
ENSSMAG00000013977	sf3b1	98	91.896	ENSPSIG00000017222	SF3B1	98	91.820	Pelodiscus_sinensis
ENSSMAG00000013977	sf3b1	90	97.076	ENSPMGG00000004330	sf3b1	99	97.076	Periophthalmus_magnuspinnatus
ENSSMAG00000013977	sf3b1	98	92.754	ENSPEMG00000010699	Sf3b1	99	92.906	Peromyscus_maniculatus_bairdii
ENSSMAG00000013977	sf3b1	99	88.528	ENSPMAG00000001311	sf3b1	99	88.830	Petromyzon_marinus
ENSSMAG00000013977	sf3b1	99	92.273	ENSPCIG00000010642	SF3B1	99	92.348	Phascolarctos_cinereus
ENSSMAG00000013977	sf3b1	99	97.422	ENSPFOG00000000073	sf3b1	99	97.422	Poecilia_formosa
ENSSMAG00000013977	sf3b1	99	97.572	ENSPLAG00000002293	sf3b1	99	97.572	Poecilia_latipinna
ENSSMAG00000013977	sf3b1	99	97.496	ENSPMEG00000000446	sf3b1	98	97.496	Poecilia_mexicana
ENSSMAG00000013977	sf3b1	99	97.572	ENSPREG00000019652	sf3b1	99	97.572	Poecilia_reticulata
ENSSMAG00000013977	sf3b1	99	96.504	ENSPPYG00000013044	SF3B1	99	96.504	Pongo_abelii
ENSSMAG00000013977	sf3b1	99	92.652	ENSPCAG00000009292	SF3B1	99	92.803	Procavia_capensis
ENSSMAG00000013977	sf3b1	99	92.803	ENSPCOG00000024074	SF3B1	99	92.955	Propithecus_coquereli
ENSSMAG00000013977	sf3b1	99	92.803	ENSPVAG00000008302	SF3B1	99	92.955	Pteropus_vampyrus
ENSSMAG00000013977	sf3b1	99	96.737	ENSPNYG00000014939	sf3b1	99	96.737	Pundamilia_nyererei
ENSSMAG00000013977	sf3b1	99	96.437	ENSPNAG00000008288	sf3b1	99	96.437	Pygocentrus_nattereri
ENSSMAG00000013977	sf3b1	99	92.803	ENSRNOG00000013516	Sf3b1	99	92.955	Rattus_norvegicus
ENSSMAG00000013977	sf3b1	99	89.074	ENSRBIG00000026096	SF3B1	99	89.226	Rhinopithecus_bieti
ENSSMAG00000013977	sf3b1	99	92.803	ENSRROG00000031308	SF3B1	99	92.955	Rhinopithecus_roxellana
ENSSMAG00000013977	sf3b1	99	92.803	ENSSBOG00000020080	SF3B1	99	92.955	Saimiri_boliviensis_boliviensis
ENSSMAG00000013977	sf3b1	99	92.273	ENSSHAG00000017564	SF3B1	99	92.348	Sarcophilus_harrisii
ENSSMAG00000013977	sf3b1	99	95.675	ENSSFOG00015021535	sf3b1	99	95.675	Scleropages_formosus
ENSSMAG00000013977	sf3b1	99	98.027	ENSSDUG00000017422	sf3b1	99	98.027	Seriola_dumerili
ENSSMAG00000013977	sf3b1	99	98.103	ENSSLDG00000019495	sf3b1	99	98.103	Seriola_lalandi_dorsalis
ENSSMAG00000013977	sf3b1	79	98.761	ENSSARG00000007016	SF3B1	75	98.761	Sorex_araneus
ENSSMAG00000013977	sf3b1	99	92.944	ENSSPUG00000000410	SF3B1	99	92.868	Sphenodon_punctatus
ENSSMAG00000013977	sf3b1	99	97.724	ENSSPAG00000010451	sf3b1	98	97.724	Stegastes_partitus
ENSSMAG00000013977	sf3b1	91	92.301	ENSSSCG00000016075	SF3B1	99	94.364	Sus_scrofa
ENSSMAG00000013977	sf3b1	99	93.020	ENSTGUG00000010553	SF3B1	99	92.944	Taeniopygia_guttata
ENSSMAG00000013977	sf3b1	99	97.420	ENSTRUG00000015534	sf3b1	99	97.420	Takifugu_rubripes
ENSSMAG00000013977	sf3b1	83	97.211	ENSTBEG00000008714	SF3B1	93	97.211	Tupaia_belangeri
ENSSMAG00000013977	sf3b1	91	93.274	ENSTTRG00000003414	SF3B1	92	93.274	Tursiops_truncatus
ENSSMAG00000013977	sf3b1	93	82.154	ENSUAMG00000018506	SF3B1	99	97.760	Ursus_americanus
ENSSMAG00000013977	sf3b1	99	92.803	ENSUMAG00000020945	SF3B1	99	92.955	Ursus_maritimus
ENSSMAG00000013977	sf3b1	94	93.444	ENSVPAG00000005798	SF3B1	95	93.444	Vicugna_pacos
ENSSMAG00000013977	sf3b1	99	92.803	ENSVVUG00000025948	SF3B1	94	92.955	Vulpes_vulpes
ENSSMAG00000013977	sf3b1	99	91.439	ENSXETG00000013339	sf3b1	99	91.439	Xenopus_tropicalis
ENSSMAG00000013977	sf3b1	99	93.020	ENSXCOG00000018086	sf3b1	99	93.247	Xiphophorus_couchianus
ENSSMAG00000013977	sf3b1	99	97.496	ENSXMAG00000007369	sf3b1	100	97.623	Xiphophorus_maculatus