EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000014082 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 16859 bases
Position: chr8:12971792-12988650
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000023269	ResIII	PF04851.15	2.7e-08	1	1
ENSSMAP00000023226	ResIII	PF04851.15	2.7e-08	1	1
ENSSMAP00000023188	ResIII	PF04851.15	2.7e-08	1	1
ENSSMAP00000023269	BRK	PF07533.16	5.1e-15	1	1
ENSSMAP00000023226	BRK	PF07533.16	5.2e-15	1	1
ENSSMAP00000023188	BRK	PF07533.16	5.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000023537	-	4872	-	ENSSMAP00000023269	1623 (aa)	-	-
ENSSMAT00000023493	-	8086	-	ENSSMAP00000023226	1635 (aa)	-	-
ENSSMAT00000023455	-	8523	-	ENSSMAP00000023188	1656 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000014082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000014082's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000014082	-	99	67.412	ENSSMAG00000013707	SMARCA2	95	67.127
ENSSMAG00000014082	-	99	81.912	ENSSMAG00000003200	smarca4a	100	81.541

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000014082	-	99	82.024	ENSG00000127616	SMARCA4	99	95.652	Homo_sapiens
ENSSMAG00000014082	-	98	94.403	ENSAPOG00000004542	SMARCA4	99	94.578	Acanthochromis_polyacanthus
ENSSMAG00000014082	-	72	87.605	ENSAPOG00000003509	smarca4a	98	83.786	Acanthochromis_polyacanthus
ENSSMAG00000014082	-	93	85.703	ENSAMEG00000010868	SMARCA4	100	79.410	Ailuropoda_melanoleuca
ENSSMAG00000014082	-	96	87.045	ENSACIG00000003035	-	96	93.031	Amphilophus_citrinellus
ENSSMAG00000014082	-	99	82.968	ENSACIG00000021550	smarca4a	98	83.040	Amphilophus_citrinellus
ENSSMAG00000014082	-	91	82.317	ENSAOCG00000019167	smarca4a	100	82.659	Amphiprion_ocellaris
ENSSMAG00000014082	-	95	90.083	ENSAOCG00000009450	-	97	89.936	Amphiprion_ocellaris
ENSSMAG00000014082	-	100	94.706	ENSAPEG00000023108	-	100	94.706	Amphiprion_percula
ENSSMAG00000014082	-	91	82.385	ENSAPEG00000015559	smarca4a	100	82.726	Amphiprion_percula
ENSSMAG00000014082	-	99	82.715	ENSATEG00000011524	smarca4a	100	82.455	Anabas_testudineus
ENSSMAG00000014082	-	99	92.840	ENSATEG00000001094	-	98	92.294	Anabas_testudineus
ENSSMAG00000014082	-	99	82.059	ENSANAG00000036991	SMARCA4	100	79.607	Aotus_nancymaae
ENSSMAG00000014082	-	99	81.269	ENSACLG00000000163	smarca4a	98	81.857	Astatotilapia_calliptera
ENSSMAG00000014082	-	98	92.677	ENSACLG00000008638	-	98	92.308	Astatotilapia_calliptera
ENSSMAG00000014082	-	95	86.402	ENSAMXG00000011238	-	94	84.997	Astyanax_mexicanus
ENSSMAG00000014082	-	96	82.664	ENSAMXG00000021023	smarca4a	96	81.203	Astyanax_mexicanus
ENSSMAG00000014082	-	99	82.546	ENSBTAG00000019220	SMARCA4	100	81.949	Bos_taurus
ENSSMAG00000014082	-	97	83.856	ENSCJAG00000005936	SMARCA4	100	79.723	Callithrix_jacchus
ENSSMAG00000014082	-	99	81.845	ENSCAFG00000017584	SMARCA4	100	81.992	Canis_familiaris
ENSSMAG00000014082	-	99	81.280	ENSCAFG00020024620	SMARCA4	100	80.315	Canis_lupus_dingo
ENSSMAG00000014082	-	99	78.806	ENSCHIG00000015318	SMARCA4	100	78.448	Capra_hircus
ENSSMAG00000014082	-	99	82.258	ENSTSYG00000012966	SMARCA4	100	81.661	Carlito_syrichta
ENSSMAG00000014082	-	96	70.762	ENSCAPG00000015932	SMARCA4	93	88.908	Cavia_aperea
ENSSMAG00000014082	-	99	82.098	ENSCPOG00000015549	SMARCA4	100	81.932	Cavia_porcellus
ENSSMAG00000014082	-	99	78.969	ENSCCAG00000031660	SMARCA4	99	79.347	Cebus_capucinus
ENSSMAG00000014082	-	99	82.024	ENSCATG00000029530	SMARCA4	100	82.111	Cercocebus_atys
ENSSMAG00000014082	-	99	82.557	ENSCLAG00000011946	SMARCA4	100	82.068	Chinchilla_lanigera
ENSSMAG00000014082	-	99	82.609	ENSCPBG00000009994	SMARCA4	100	82.279	Chrysemys_picta_bellii
ENSSMAG00000014082	-	99	81.964	ENSCANG00000036013	SMARCA4	100	82.111	Colobus_angolensis_palliatus
ENSSMAG00000014082	-	99	81.726	ENSCGRG00001016732	Smarca4	100	81.813	Cricetulus_griseus_chok1gshd
ENSSMAG00000014082	-	99	81.726	ENSCGRG00000017242	Smarca4	100	81.813	Cricetulus_griseus_crigri
ENSSMAG00000014082	-	96	82.090	ENSCSEG00000014771	smarca4a	100	81.894	Cynoglossus_semilaevis
ENSSMAG00000014082	-	99	81.235	ENSCVAG00000006979	smarca4a	99	81.636	Cyprinodon_variegatus
ENSSMAG00000014082	-	99	86.044	ENSCVAG00000003018	-	96	89.288	Cyprinodon_variegatus
ENSSMAG00000014082	-	99	84.002	ENSDARG00000077226	smarca4a	100	83.383	Danio_rerio
ENSSMAG00000014082	-	93	83.892	ENSDARG00000104339	SMARCA4	94	84.686	Danio_rerio
ENSSMAG00000014082	-	80	80.922	ENSDNOG00000048847	SMARCA4	90	89.405	Dasypus_novemcinctus
ENSSMAG00000014082	-	85	76.752	ENSDORG00000002544	Smarca4	91	77.557	Dipodomys_ordii
ENSSMAG00000014082	-	94	72.727	ENSETEG00000013361	SMARCA4	94	72.271	Echinops_telfairi
ENSSMAG00000014082	-	99	81.964	ENSEASG00005006167	SMARCA4	100	79.848	Equus_asinus_asinus
ENSSMAG00000014082	-	99	82.278	ENSECAG00000008334	SMARCA4	100	81.574	Equus_caballus
ENSSMAG00000014082	-	96	79.721	ENSELUG00000023232	-	96	84.815	Esox_lucius
ENSSMAG00000014082	-	99	82.164	ENSELUG00000010247	smarca4a	99	82.061	Esox_lucius
ENSSMAG00000014082	-	99	81.818	ENSFCAG00000004894	SMARCA4	100	81.905	Felis_catus
ENSSMAG00000014082	-	92	82.738	ENSFDAG00000012237	SMARCA4	97	82.154	Fukomys_damarensis
ENSSMAG00000014082	-	100	92.110	ENSFHEG00000007902	-	100	91.148	Fundulus_heteroclitus
ENSSMAG00000014082	-	96	77.831	ENSFHEG00000010182	smarca4a	100	80.819	Fundulus_heteroclitus
ENSSMAG00000014082	-	88	79.205	ENSGMOG00000002649	smarca4a	94	79.464	Gadus_morhua
ENSSMAG00000014082	-	90	85.185	ENSGMOG00000005756	-	90	82.131	Gadus_morhua
ENSSMAG00000014082	-	74	82.982	ENSGALG00000047145	SMARCA4	100	83.388	Gallus_gallus
ENSSMAG00000014082	-	99	84.265	ENSGAFG00000008827	-	98	82.980	Gambusia_affinis
ENSSMAG00000014082	-	87	85.021	ENSGAFG00000014900	smarca4a	97	84.726	Gambusia_affinis
ENSSMAG00000014082	-	93	83.782	ENSGACG00000006691	smarca4a	100	80.443	Gasterosteus_aculeatus
ENSSMAG00000014082	-	99	85.974	ENSGACG00000016033	-	100	85.446	Gasterosteus_aculeatus
ENSSMAG00000014082	-	99	82.816	ENSGAGG00000016757	SMARCA4	100	82.487	Gopherus_agassizii
ENSSMAG00000014082	-	99	82.024	ENSGGOG00000009882	SMARCA4	100	82.111	Gorilla_gorilla
ENSSMAG00000014082	-	100	92.938	ENSHBUG00000005447	-	100	91.911	Haplochromis_burtoni
ENSSMAG00000014082	-	99	82.688	ENSHBUG00000021172	smarca4a	100	82.476	Haplochromis_burtoni
ENSSMAG00000014082	-	99	81.683	ENSHGLG00000010519	SMARCA4	100	81.710	Heterocephalus_glaber_female
ENSSMAG00000014082	-	99	82.192	ENSHGLG00100013774	SMARCA4	100	81.548	Heterocephalus_glaber_male
ENSSMAG00000014082	-	99	83.241	ENSHCOG00000009510	smarca4a	99	83.767	Hippocampus_comes
ENSSMAG00000014082	-	99	83.546	ENSIPUG00000006107	smarca4a	100	82.388	Ictalurus_punctatus
ENSSMAG00000014082	-	98	83.364	ENSIPUG00000016346	-	97	82.748	Ictalurus_punctatus
ENSSMAG00000014082	-	99	82.083	ENSSTOG00000007939	SMARCA4	100	81.694	Ictidomys_tridecemlineatus
ENSSMAG00000014082	-	99	80.587	ENSJJAG00000012877	Smarca4	100	80.930	Jaculus_jaculus
ENSSMAG00000014082	-	100	91.622	ENSKMAG00000019518	-	100	91.393	Kryptolebias_marmoratus
ENSSMAG00000014082	-	99	80.594	ENSKMAG00000011931	smarca4a	100	81.568	Kryptolebias_marmoratus
ENSSMAG00000014082	-	95	82.416	ENSLBEG00000020655	-	94	91.519	Labrus_bergylta
ENSSMAG00000014082	-	98	80.929	ENSLBEG00000017383	smarca4a	97	79.119	Labrus_bergylta
ENSSMAG00000014082	-	53	76.364	ENSLACG00000015309	SMARCA4	100	76.364	Latimeria_chalumnae
ENSSMAG00000014082	-	99	79.770	ENSLOCG00000007820	smarca4a	99	79.167	Lepisosteus_oculatus
ENSSMAG00000014082	-	99	81.759	ENSLAFG00000001433	SMARCA4	100	81.845	Loxodonta_africana
ENSSMAG00000014082	-	99	81.457	ENSMFAG00000032146	SMARCA4	100	80.573	Macaca_fascicularis
ENSSMAG00000014082	-	99	82.024	ENSMMUG00000012042	SMARCA4	99	85.649	Macaca_mulatta
ENSSMAG00000014082	-	99	82.567	ENSMNEG00000028512	SMARCA4	100	82.149	Macaca_nemestrina
ENSSMAG00000014082	-	99	81.878	ENSMLEG00000034976	SMARCA4	100	81.905	Mandrillus_leucophaeus
ENSSMAG00000014082	-	96	84.912	ENSMAMG00000009256	smarca4a	100	82.554	Mastacembelus_armatus
ENSSMAG00000014082	-	100	94.026	ENSMAMG00000002841	-	100	94.026	Mastacembelus_armatus
ENSSMAG00000014082	-	99	82.556	ENSMZEG00005003889	smarca4a	100	82.346	Maylandia_zebra
ENSSMAG00000014082	-	98	93.680	ENSMZEG00005023861	-	98	91.803	Maylandia_zebra
ENSSMAG00000014082	-	99	81.640	ENSMAUG00000020731	Smarca4	100	81.726	Mesocricetus_auratus
ENSSMAG00000014082	-	99	81.818	ENSMICG00000009806	SMARCA4	100	81.905	Microcebus_murinus
ENSSMAG00000014082	-	99	81.283	ENSMOCG00000022209	Smarca4	100	81.488	Microtus_ochrogaster
ENSSMAG00000014082	-	99	85.124	ENSMMOG00000008466	-	98	90.780	Mola_mola
ENSSMAG00000014082	-	96	79.627	ENSMMOG00000007571	smarca4a	98	81.451	Mola_mola
ENSSMAG00000014082	-	99	81.663	ENSMODG00000006287	SMARCA4	100	81.309	Monodelphis_domestica
ENSSMAG00000014082	-	93	83.137	ENSMALG00000003388	smarca4a	100	81.900	Monopterus_albus
ENSSMAG00000014082	-	91	95.082	ENSMALG00000021534	-	99	88.211	Monopterus_albus
ENSSMAG00000014082	-	99	81.548	MGP_CAROLIEiJ_G0031879	Smarca4	100	84.094	Mus_caroli
ENSSMAG00000014082	-	99	81.548	ENSMUSG00000032187	Smarca4	99	84.094	Mus_musculus
ENSSMAG00000014082	-	99	82.258	MGP_PahariEiJ_G0014745	Smarca4	100	84.360	Mus_pahari
ENSSMAG00000014082	-	99	81.548	MGP_SPRETEiJ_G0033003	Smarca4	100	84.094	Mus_spretus
ENSSMAG00000014082	-	99	81.845	ENSMPUG00000005711	SMARCA4	100	81.932	Mustela_putorius_furo
ENSSMAG00000014082	-	99	82.469	ENSMLUG00000004491	-	100	82.051	Myotis_lucifugus
ENSSMAG00000014082	-	99	81.900	ENSNGAG00000021852	Smarca4	100	82.008	Nannospalax_galili
ENSSMAG00000014082	-	96	82.631	ENSNBRG00000011457	smarca4a	96	82.994	Neolamprologus_brichardi
ENSSMAG00000014082	-	91	88.347	ENSNBRG00000018865	-	99	88.618	Neolamprologus_brichardi
ENSSMAG00000014082	-	96	80.428	ENSNLEG00000012389	SMARCA4	94	79.135	Nomascus_leucogenys
ENSSMAG00000014082	-	79	93.103	ENSOPRG00000000885	-	76	93.103	Ochotona_princeps
ENSSMAG00000014082	-	99	81.422	ENSODEG00000017127	SMARCA4	84	86.770	Octodon_degus
ENSSMAG00000014082	-	99	93.174	ENSONIG00000018040	-	100	92.146	Oreochromis_niloticus
ENSSMAG00000014082	-	99	81.314	ENSONIG00000008196	smarca4a	100	82.335	Oreochromis_niloticus
ENSSMAG00000014082	-	98	77.228	ENSOCUG00000001787	SMARCA4	95	79.161	Oryctolagus_cuniculus
ENSSMAG00000014082	-	97	91.286	ENSORLG00000003955	-	100	90.675	Oryzias_latipes
ENSSMAG00000014082	-	96	81.316	ENSORLG00000015452	smarca4a	100	81.568	Oryzias_latipes
ENSSMAG00000014082	-	96	81.130	ENSORLG00020004611	smarca4a	100	81.688	Oryzias_latipes_hni
ENSSMAG00000014082	-	97	91.291	ENSORLG00020009728	-	100	91.099	Oryzias_latipes_hni
ENSSMAG00000014082	-	100	90.789	ENSORLG00015007739	-	100	90.730	Oryzias_latipes_hsok
ENSSMAG00000014082	-	96	81.068	ENSORLG00015016560	smarca4a	100	81.628	Oryzias_latipes_hsok
ENSSMAG00000014082	-	99	81.944	ENSOMEG00000007486	smarca4a	100	82.254	Oryzias_melastigma
ENSSMAG00000014082	-	97	91.538	ENSOMEG00000016626	-	100	91.208	Oryzias_melastigma
ENSSMAG00000014082	-	71	88.144	ENSOGAG00000016148	SMARCA4	100	80.690	Otolemur_garnettii
ENSSMAG00000014082	-	99	81.900	ENSOARG00000017454	SMARCA4	97	81.537	Ovis_aries
ENSSMAG00000014082	-	99	82.024	ENSPPAG00000043191	SMARCA4	100	82.111	Pan_paniscus
ENSSMAG00000014082	-	99	81.818	ENSPPRG00000000064	SMARCA4	100	81.905	Panthera_pardus
ENSSMAG00000014082	-	78	83.396	ENSPTIG00000017447	SMARCA4	100	76.512	Panthera_tigris_altaica
ENSSMAG00000014082	-	99	82.024	ENSPTRG00000010488	SMARCA4	100	82.111	Pan_troglodytes
ENSSMAG00000014082	-	99	84.280	ENSPANG00000011042	SMARCA4	100	81.011	Papio_anubis
ENSSMAG00000014082	-	99	84.587	ENSPKIG00000007770	SMARCA4	99	83.728	Paramormyrops_kingsleyae
ENSSMAG00000014082	-	93	86.054	ENSPKIG00000010087	-	97	82.316	Paramormyrops_kingsleyae
ENSSMAG00000014082	-	96	78.611	ENSPSIG00000005547	SMARCA4	100	78.151	Pelodiscus_sinensis
ENSSMAG00000014082	-	99	81.462	ENSPEMG00000020389	Smarca4	100	81.548	Peromyscus_maniculatus_bairdii
ENSSMAG00000014082	-	99	80.570	ENSPFOG00000007892	smarca4a	100	80.689	Poecilia_formosa
ENSSMAG00000014082	-	100	91.751	ENSPFOG00000012930	-	100	91.512	Poecilia_formosa
ENSSMAG00000014082	-	99	80.749	ENSPLAG00000014294	smarca4a	100	80.867	Poecilia_latipinna
ENSSMAG00000014082	-	87	95.735	ENSPLAG00000018616	-	98	88.740	Poecilia_latipinna
ENSSMAG00000014082	-	100	91.535	ENSPMEG00000008929	-	99	90.438	Poecilia_mexicana
ENSSMAG00000014082	-	95	81.398	ENSPMEG00000003725	smarca4a	96	81.250	Poecilia_mexicana
ENSSMAG00000014082	-	99	78.532	ENSPREG00000014608	smarca4a	100	80.486	Poecilia_reticulata
ENSSMAG00000014082	-	99	90.915	ENSPREG00000014823	-	100	89.758	Poecilia_reticulata
ENSSMAG00000014082	-	99	81.636	ENSPPYG00000009568	SMARCA4	100	81.283	Pongo_abelii
ENSSMAG00000014082	-	80	82.781	ENSPCAG00000014054	SMARCA4	77	82.781	Procavia_capensis
ENSSMAG00000014082	-	99	81.699	ENSPCOG00000023011	SMARCA4	100	81.786	Propithecus_coquereli
ENSSMAG00000014082	-	95	74.227	ENSPVAG00000007787	SMARCA4	96	74.957	Pteropus_vampyrus
ENSSMAG00000014082	-	98	87.196	ENSPNYG00000023995	-	97	92.639	Pundamilia_nyererei
ENSSMAG00000014082	-	96	84.547	ENSPNYG00000000717	smarca4a	96	82.809	Pundamilia_nyererei
ENSSMAG00000014082	-	96	86.684	ENSPNAG00000006636	-	93	84.987	Pygocentrus_nattereri
ENSSMAG00000014082	-	99	81.548	ENSRNOG00000009271	Smarca4	100	81.634	Rattus_norvegicus
ENSSMAG00000014082	-	99	81.398	ENSRBIG00000038696	SMARCA4	100	80.515	Rhinopithecus_bieti
ENSSMAG00000014082	-	99	81.964	ENSRROG00000045509	SMARCA4	100	82.051	Rhinopithecus_roxellana
ENSSMAG00000014082	-	99	82.729	ENSSBOG00000026896	SMARCA4	99	82.367	Saimiri_boliviensis_boliviensis
ENSSMAG00000014082	-	99	82.209	ENSSHAG00000001642	SMARCA4	100	81.970	Sarcophilus_harrisii
ENSSMAG00000014082	-	99	84.354	ENSSFOG00015013823	smarca4	99	83.192	Scleropages_formosus
ENSSMAG00000014082	-	93	81.937	ENSSFOG00015009921	-	91	87.519	Scleropages_formosus
ENSSMAG00000014082	-	99	77.437	ENSSDUG00000017298	smarca4a	100	77.473	Seriola_dumerili
ENSSMAG00000014082	-	98	94.763	ENSSDUG00000005388	-	100	95.062	Seriola_dumerili
ENSSMAG00000014082	-	99	82.798	ENSSLDG00000024486	smarca4a	100	82.656	Seriola_lalandi_dorsalis
ENSSMAG00000014082	-	96	89.241	ENSSLDG00000023663	-	97	90.145	Seriola_lalandi_dorsalis
ENSSMAG00000014082	-	60	96.273	ENSSARG00000013477	SMARCA4	82	96.273	Sorex_araneus
ENSSMAG00000014082	-	96	80.589	ENSSPUG00000004558	SMARCA4	98	79.912	Sphenodon_punctatus
ENSSMAG00000014082	-	100	94.474	ENSSPAG00000012533	-	100	94.474	Stegastes_partitus
ENSSMAG00000014082	-	99	82.495	ENSSPAG00000004248	smarca4a	100	82.416	Stegastes_partitus
ENSSMAG00000014082	-	99	81.878	ENSSSCG00000013629	SMARCA4	100	81.964	Sus_scrofa
ENSSMAG00000014082	-	91	80.068	ENSTRUG00000004885	smarca4a	100	78.719	Takifugu_rubripes
ENSSMAG00000014082	-	98	91.386	ENSTRUG00000001378	SMARCA4	99	91.386	Takifugu_rubripes
ENSSMAG00000014082	-	68	85.596	ENSTNIG00000004859	-	100	84.698	Tetraodon_nigroviridis
ENSSMAG00000014082	-	99	87.799	ENSTNIG00000004536	SMARCA4	100	87.133	Tetraodon_nigroviridis
ENSSMAG00000014082	-	99	80.318	ENSTTRG00000009519	SMARCA4	100	79.729	Tursiops_truncatus
ENSSMAG00000014082	-	99	81.905	ENSUAMG00000014661	SMARCA4	100	81.992	Ursus_americanus
ENSSMAG00000014082	-	96	80.407	ENSUMAG00000022005	SMARCA4	98	87.415	Ursus_maritimus
ENSSMAG00000014082	-	99	81.280	ENSVVUG00000017820	SMARCA4	97	80.950	Vulpes_vulpes
ENSSMAG00000014082	-	99	76.772	ENSXETG00000009355	smarca4	100	77.469	Xenopus_tropicalis
ENSSMAG00000014082	-	99	85.401	ENSXCOG00000013494	-	98	85.393	Xiphophorus_couchianus
ENSSMAG00000014082	-	100	91.632	ENSXMAG00000007030	-	100	90.969	Xiphophorus_maculatus
ENSSMAG00000014082	-	99	80.762	ENSXMAG00000006321	smarca4a	100	80.584	Xiphophorus_maculatus