EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000014181 (Gene tree)
Gene ID: -
Gene Symbol: grsf1
Alias: wu:fb62c04|zgc:153305
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 7055 bases
Position: chr9:22979278-22986332
Accession: ZDB-GENE-060825-196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000023234	RRM_1	PF00076.22	3.2e-25	1	3
ENSSMAP00000023234	RRM_1	PF00076.22	3.2e-25	2	3
ENSSMAP00000023234	RRM_1	PF00076.22	3.2e-25	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000023501	-	2554	-	ENSSMAP00000023234	457 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000014181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000014181's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000014181	grsf1	65	52.874	ENSSMAG00000004504	hnrnph3	92	36.022
ENSSMAG00000014181	grsf1	69	39.276	ENSSMAG00000007820	hnrnph1	85	38.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000014181	grsf1	100	52.597	ENSAPOG00000012487	grsf1	100	52.381	Acanthochromis_polyacanthus
ENSSMAG00000014181	grsf1	88	66.044	ENSACIG00000005871	grsf1	83	66.044	Amphilophus_citrinellus
ENSSMAG00000014181	grsf1	88	64.923	ENSAOCG00000017462	-	100	64.923	Amphiprion_ocellaris
ENSSMAG00000014181	grsf1	88	64.724	ENSAPEG00000007240	-	100	64.724	Amphiprion_percula
ENSSMAG00000014181	grsf1	99	54.705	ENSATEG00000007185	grsf1	100	54.486	Anabas_testudineus
ENSSMAG00000014181	grsf1	88	63.720	ENSACLG00000003685	-	100	63.720	Astatotilapia_calliptera
ENSSMAG00000014181	grsf1	70	51.582	ENSAMXG00000012270	grsf1	99	51.242	Astyanax_mexicanus
ENSSMAG00000014181	grsf1	91	61.027	ENSCSEG00000019209	-	100	61.631	Cynoglossus_semilaevis
ENSSMAG00000014181	grsf1	72	60.961	ENSCVAG00000004476	grsf1	86	60.961	Cyprinodon_variegatus
ENSSMAG00000014181	grsf1	70	48.297	ENSDARG00000053021	grsf1	77	48.297	Danio_rerio
ENSSMAG00000014181	grsf1	99	46.855	ENSFHEG00000013358	-	99	47.799	Fundulus_heteroclitus
ENSSMAG00000014181	grsf1	67	55.000	ENSGMOG00000014047	grsf1	99	55.000	Gadus_morhua
ENSSMAG00000014181	grsf1	69	61.875	ENSGAFG00000004496	grsf1	81	61.875	Gambusia_affinis
ENSSMAG00000014181	grsf1	67	59.146	ENSGACG00000014447	grsf1	99	59.146	Gasterosteus_aculeatus
ENSSMAG00000014181	grsf1	88	64.220	ENSHBUG00000006284	grsf1	99	64.220	Haplochromis_burtoni
ENSSMAG00000014181	grsf1	70	57.862	ENSHCOG00000007715	-	82	57.862	Hippocampus_comes
ENSSMAG00000014181	grsf1	70	54.603	ENSIPUG00000010533	grsf1	80	54.603	Ictalurus_punctatus
ENSSMAG00000014181	grsf1	71	59.940	ENSKMAG00000004528	grsf1	79	59.940	Kryptolebias_marmoratus
ENSSMAG00000014181	grsf1	67	51.475	ENSLBEG00000018100	grsf1	94	51.495	Labrus_bergylta
ENSSMAG00000014181	grsf1	89	67.081	ENSMAMG00000002627	grsf1	99	67.081	Mastacembelus_armatus
ENSSMAG00000014181	grsf1	88	63.720	ENSMZEG00005020633	-	100	63.720	Maylandia_zebra
ENSSMAG00000014181	grsf1	70	68.525	ENSMMOG00000014231	grsf1	98	68.525	Mola_mola
ENSSMAG00000014181	grsf1	88	65.455	ENSMALG00000000251	grsf1	99	65.455	Monopterus_albus
ENSSMAG00000014181	grsf1	88	61.728	ENSNBRG00000017774	grsf1	96	61.728	Neolamprologus_brichardi
ENSSMAG00000014181	grsf1	88	64.634	ENSONIG00000014119	grsf1	100	64.634	Oreochromis_niloticus
ENSSMAG00000014181	grsf1	70	62.813	ENSORLG00000030211	grsf1	82	62.813	Oryzias_latipes
ENSSMAG00000014181	grsf1	70	62.264	ENSORLG00020014383	grsf1	83	63.750	Oryzias_latipes_hni
ENSSMAG00000014181	grsf1	70	61.950	ENSORLG00015006520	grsf1	82	63.125	Oryzias_latipes_hsok
ENSSMAG00000014181	grsf1	70	62.500	ENSOMEG00000009181	grsf1	84	63.158	Oryzias_melastigma
ENSSMAG00000014181	grsf1	69	52.134	ENSPKIG00000019432	grsf1	77	52.134	Paramormyrops_kingsleyae
ENSSMAG00000014181	grsf1	70	60.534	ENSPMGG00000013654	grsf1	92	60.534	Periophthalmus_magnuspinnatus
ENSSMAG00000014181	grsf1	70	60.671	ENSPFOG00000006122	grsf1	81	60.671	Poecilia_formosa
ENSSMAG00000014181	grsf1	70	61.420	ENSPLAG00000020977	grsf1	81	61.728	Poecilia_latipinna
ENSSMAG00000014181	grsf1	70	60.671	ENSPMEG00000012485	grsf1	81	60.366	Poecilia_mexicana
ENSSMAG00000014181	grsf1	69	60.123	ENSPREG00000013383	grsf1	81	60.123	Poecilia_reticulata
ENSSMAG00000014181	grsf1	88	63.914	ENSPNYG00000005379	grsf1	100	63.914	Pundamilia_nyererei
ENSSMAG00000014181	grsf1	72	55.352	ENSPNAG00000014912	grsf1	78	55.352	Pygocentrus_nattereri
ENSSMAG00000014181	grsf1	68	48.232	ENSSFOG00015014620	grsf1	81	47.302	Scleropages_formosus
ENSSMAG00000014181	grsf1	88	64.486	ENSSDUG00000009397	-	98	64.545	Seriola_dumerili
ENSSMAG00000014181	grsf1	88	64.486	ENSSLDG00000025494	grsf1	100	64.486	Seriola_lalandi_dorsalis
ENSSMAG00000014181	grsf1	99	60.991	ENSSPAG00000023296	grsf1	99	60.991	Stegastes_partitus
ENSSMAG00000014181	grsf1	69	62.145	ENSTRUG00000015354	grsf1	81	62.145	Takifugu_rubripes
ENSSMAG00000014181	grsf1	70	60.606	ENSTNIG00000015350	-	95	60.606	Tetraodon_nigroviridis
ENSSMAG00000014181	grsf1	69	60.436	ENSXMAG00000029710	grsf1	81	60.436	Xiphophorus_maculatus