EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000014592 (Gene tree)
Gene ID: -
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 4365 bases
Position: chr12:121713-126077
Accession: ZDB-GENE-050327-19
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000023918	TRM13	PF05206.14	4.6e-80	1	1
ENSSMAP00000023937	TRM13	PF05206.14	5.2e-80	1	1
ENSSMAP00000023899	TRM13	PF05206.14	6.1e-80	1	1
ENSSMAP00000023899	zf-U11-48K	PF05253.12	6.5e-10	1	1
ENSSMAP00000023918	zf-TRM13_CCCH	PF11722.8	3.5e-11	1	1
ENSSMAP00000023899	zf-TRM13_CCCH	PF11722.8	3.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000024198	-	1528	-	ENSSMAP00000023918	438 (aa)	-	-
ENSSMAT00000024221	-	2168	-	ENSSMAP00000023937	435 (aa)	-	-
ENSSMAT00000024178	-	1639	-	ENSSMAP00000023899	475 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000014592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000014592's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000014592	trmt13	97	51.153	ENSG00000122435	TRMT13	88	61.458	Homo_sapiens
ENSSMAG00000014592	trmt13	96	70.455	ENSAPOG00000015131	trmt13	99	70.455	Acanthochromis_polyacanthus
ENSSMAG00000014592	trmt13	97	51.579	ENSAMEG00000008917	TRMT13	96	51.579	Ailuropoda_melanoleuca
ENSSMAG00000014592	trmt13	98	71.338	ENSACIG00000005804	trmt13	95	71.338	Amphilophus_citrinellus
ENSSMAG00000014592	trmt13	96	70.000	ENSAOCG00000023585	trmt13	99	70.000	Amphiprion_ocellaris
ENSSMAG00000014592	trmt13	96	69.939	ENSAPEG00000004025	trmt13	99	69.939	Amphiprion_percula
ENSSMAG00000014592	trmt13	95	73.581	ENSATEG00000006597	trmt13	96	73.581	Anabas_testudineus
ENSSMAG00000014592	trmt13	94	52.133	ENSAPLG00000014924	TRMT13	99	52.765	Anas_platyrhynchos
ENSSMAG00000014592	trmt13	97	52.731	ENSACAG00000003498	TRMT13	99	52.731	Anolis_carolinensis
ENSSMAG00000014592	trmt13	99	50.509	ENSANAG00000019525	TRMT13	94	57.843	Aotus_nancymaae
ENSSMAG00000014592	trmt13	96	70.806	ENSACLG00000020018	trmt13	99	70.806	Astatotilapia_calliptera
ENSSMAG00000014592	trmt13	97	51.346	ENSAMXG00000017963	trmt13	99	51.967	Astyanax_mexicanus
ENSSMAG00000014592	trmt13	99	49.898	ENSBTAG00000015781	TRMT13	99	49.898	Bos_taurus
ENSSMAG00000014592	trmt13	99	50.102	ENSCJAG00000000200	TRMT13	90	61.151	Callithrix_jacchus
ENSSMAG00000014592	trmt13	71	49.693	ENSCAFG00000020021	TRMT13	98	49.693	Canis_familiaris
ENSSMAG00000014592	trmt13	55	58.491	ENSCAFG00020011572	TRMT13	90	58.491	Canis_lupus_dingo
ENSSMAG00000014592	trmt13	99	49.390	ENSCHIG00000015395	TRMT13	99	49.390	Capra_hircus
ENSSMAG00000014592	trmt13	97	50.939	ENSTSYG00000010811	TRMT13	95	59.794	Carlito_syrichta
ENSSMAG00000014592	trmt13	80	38.352	ENSCAPG00000009085	TRMT13	96	41.226	Cavia_aperea
ENSSMAG00000014592	trmt13	97	50.417	ENSCPOG00000000694	TRMT13	98	50.208	Cavia_porcellus
ENSSMAG00000014592	trmt13	99	50.509	ENSCCAG00000023772	TRMT13	94	57.843	Cebus_capucinus
ENSSMAG00000014592	trmt13	99	50.511	ENSCATG00000033556	TRMT13	94	58.824	Cercocebus_atys
ENSSMAG00000014592	trmt13	96	47.917	ENSCLAG00000008220	TRMT13	99	50.000	Chinchilla_lanigera
ENSSMAG00000014592	trmt13	99	50.716	ENSCSAG00000001506	TRMT13	99	50.716	Chlorocebus_sabaeus
ENSSMAG00000014592	trmt13	98	51.875	ENSCPBG00000026671	TRMT13	98	51.875	Chrysemys_picta_bellii
ENSSMAG00000014592	trmt13	99	50.511	ENSCANG00000034659	TRMT13	94	58.824	Colobus_angolensis_palliatus
ENSSMAG00000014592	trmt13	98	49.278	ENSCGRG00001021601	Trmt13	98	49.278	Cricetulus_griseus_chok1gshd
ENSSMAG00000014592	trmt13	55	46.275	ENSCGRG00000000093	-	96	46.304	Cricetulus_griseus_crigri
ENSSMAG00000014592	trmt13	99	66.383	ENSCSEG00000000591	trmt13	99	66.383	Cynoglossus_semilaevis
ENSSMAG00000014592	trmt13	96	68.220	ENSCVAG00000017342	trmt13	94	68.220	Cyprinodon_variegatus
ENSSMAG00000014592	trmt13	97	53.017	ENSDARG00000102846	trmt13	97	53.017	Danio_rerio
ENSSMAG00000014592	trmt13	55	55.019	ENSDNOG00000001710	TRMT13	80	55.019	Dasypus_novemcinctus
ENSSMAG00000014592	trmt13	99	50.820	ENSDORG00000015808	Trmt13	99	50.820	Dipodomys_ordii
ENSSMAG00000014592	trmt13	95	33.192	FBgn0037435	CG18048	94	33.192	Drosophila_melanogaster
ENSSMAG00000014592	trmt13	95	45.263	ENSETEG00000005819	TRMT13	96	45.263	Echinops_telfairi
ENSSMAG00000014592	trmt13	94	43.723	ENSEBUG00000014444	trmt13	96	43.723	Eptatretus_burgeri
ENSSMAG00000014592	trmt13	95	51.592	ENSEASG00005015918	TRMT13	95	51.592	Equus_asinus_asinus
ENSSMAG00000014592	trmt13	95	51.592	ENSECAG00000022626	TRMT13	95	51.592	Equus_caballus
ENSSMAG00000014592	trmt13	73	51.667	ENSEEUG00000000294	TRMT13	74	51.667	Erinaceus_europaeus
ENSSMAG00000014592	trmt13	97	54.334	ENSELUG00000003803	trmt13	99	55.180	Esox_lucius
ENSSMAG00000014592	trmt13	99	49.898	ENSFCAG00000030618	TRMT13	94	56.863	Felis_catus
ENSSMAG00000014592	trmt13	96	53.419	ENSFALG00000002424	TRMT13	96	53.419	Ficedula_albicollis
ENSSMAG00000014592	trmt13	98	50.103	ENSFDAG00000006342	TRMT13	97	50.103	Fukomys_damarensis
ENSSMAG00000014592	trmt13	81	68.702	ENSFHEG00000022954	trmt13	100	69.438	Fundulus_heteroclitus
ENSSMAG00000014592	trmt13	95	52.434	ENSGMOG00000013223	trmt13	100	53.097	Gadus_morhua
ENSSMAG00000014592	trmt13	94	53.261	ENSGALG00000005290	TRMT13	99	52.391	Gallus_gallus
ENSSMAG00000014592	trmt13	78	66.223	ENSGAFG00000001577	trmt13	82	66.223	Gambusia_affinis
ENSSMAG00000014592	trmt13	98	74.249	ENSGACG00000013428	trmt13	99	75.536	Gasterosteus_aculeatus
ENSSMAG00000014592	trmt13	97	52.311	ENSGAGG00000023303	TRMT13	97	58.974	Gopherus_agassizii
ENSSMAG00000014592	trmt13	97	50.943	ENSGGOG00000005616	TRMT13	88	61.458	Gorilla_gorilla
ENSSMAG00000014592	trmt13	96	71.460	ENSHBUG00000007754	trmt13	99	71.460	Haplochromis_burtoni
ENSSMAG00000014592	trmt13	98	49.689	ENSHGLG00000002164	TRMT13	97	49.689	Heterocephalus_glaber_female
ENSSMAG00000014592	trmt13	98	49.689	ENSHGLG00100001618	TRMT13	97	49.689	Heterocephalus_glaber_male
ENSSMAG00000014592	trmt13	96	56.503	ENSHCOG00000020553	trmt13	99	56.809	Hippocampus_comes
ENSSMAG00000014592	trmt13	97	53.731	ENSIPUG00000024787	trmt13	99	54.584	Ictalurus_punctatus
ENSSMAG00000014592	trmt13	95	50.318	ENSSTOG00000013483	TRMT13	95	50.318	Ictidomys_tridecemlineatus
ENSSMAG00000014592	trmt13	99	49.897	ENSJJAG00000018012	Trmt13	99	49.897	Jaculus_jaculus
ENSSMAG00000014592	trmt13	75	65.538	ENSKMAG00000007639	trmt13	98	65.538	Kryptolebias_marmoratus
ENSSMAG00000014592	trmt13	96	71.121	ENSLBEG00000020238	trmt13	99	73.276	Labrus_bergylta
ENSSMAG00000014592	trmt13	96	55.319	ENSLACG00000013153	TRMT13	99	54.187	Latimeria_chalumnae
ENSSMAG00000014592	trmt13	97	52.754	ENSLOCG00000000418	trmt13	98	53.390	Lepisosteus_oculatus
ENSSMAG00000014592	trmt13	83	49.735	ENSLAFG00000002383	TRMT13	98	49.735	Loxodonta_africana
ENSSMAG00000014592	trmt13	99	50.307	ENSMFAG00000034681	TRMT13	94	58.824	Macaca_fascicularis
ENSSMAG00000014592	trmt13	99	50.307	ENSMMUG00000004243	TRMT13	94	58.824	Macaca_mulatta
ENSSMAG00000014592	trmt13	99	50.307	ENSMNEG00000036102	TRMT13	94	58.824	Macaca_nemestrina
ENSSMAG00000014592	trmt13	99	50.307	ENSMLEG00000034258	TRMT13	94	57.843	Mandrillus_leucophaeus
ENSSMAG00000014592	trmt13	95	77.434	ENSMAMG00000016597	trmt13	95	77.434	Mastacembelus_armatus
ENSSMAG00000014592	trmt13	96	70.588	ENSMZEG00005020959	trmt13	99	70.588	Maylandia_zebra
ENSSMAG00000014592	trmt13	94	53.957	ENSMGAG00000006970	TRMT13	99	54.630	Meleagris_gallopavo
ENSSMAG00000014592	trmt13	97	49.792	ENSMAUG00000010448	Trmt13	97	49.792	Mesocricetus_auratus
ENSSMAG00000014592	trmt13	97	50.939	ENSMICG00000005283	TRMT13	94	59.804	Microcebus_murinus
ENSSMAG00000014592	trmt13	97	51.368	ENSMOCG00000019914	Trmt13	96	51.368	Microtus_ochrogaster
ENSSMAG00000014592	trmt13	56	66.288	ENSMMOG00000007762	trmt13	90	67.769	Mola_mola
ENSSMAG00000014592	trmt13	99	49.592	ENSMODG00000003646	TRMT13	99	49.592	Monodelphis_domestica
ENSSMAG00000014592	trmt13	97	69.892	ENSMALG00000020965	trmt13	98	69.546	Monopterus_albus
ENSSMAG00000014592	trmt13	97	50.314	MGP_CAROLIEiJ_G0025568	Trmt13	99	51.913	Mus_caroli
ENSSMAG00000014592	trmt13	97	49.895	ENSMUSG00000033439	Trmt13	99	51.913	Mus_musculus
ENSSMAG00000014592	trmt13	97	50.524	MGP_PahariEiJ_G0027014	Trmt13	92	56.204	Mus_pahari
ENSSMAG00000014592	trmt13	97	50.105	MGP_SPRETEiJ_G0026518	Trmt13	99	51.913	Mus_spretus
ENSSMAG00000014592	trmt13	86	49.474	ENSMPUG00000002078	-	98	49.474	Mustela_putorius_furo
ENSSMAG00000014592	trmt13	95	51.282	ENSMLUG00000002124	TRMT13	95	51.282	Myotis_lucifugus
ENSSMAG00000014592	trmt13	98	65.957	ENSNBRG00000006783	trmt13	99	65.957	Neolamprologus_brichardi
ENSSMAG00000014592	trmt13	97	50.943	ENSNLEG00000035917	TRMT13	83	64.444	Nomascus_leucogenys
ENSSMAG00000014592	trmt13	52	47.036	ENSMEUG00000013346	-	99	47.036	Notamacropus_eugenii
ENSSMAG00000014592	trmt13	55	58.113	ENSOPRG00000012048	TRMT13	54	58.113	Ochotona_princeps
ENSSMAG00000014592	trmt13	96	71.895	ENSONIG00000004574	trmt13	99	71.895	Oreochromis_niloticus
ENSSMAG00000014592	trmt13	94	52.482	ENSOANG00000012057	TRMT13	97	53.103	Ornithorhynchus_anatinus
ENSSMAG00000014592	trmt13	95	51.064	ENSOCUG00000023095	TRMT13	95	51.064	Oryctolagus_cuniculus
ENSSMAG00000014592	trmt13	97	61.783	ENSORLG00000003320	trmt13	99	61.653	Oryzias_latipes
ENSSMAG00000014592	trmt13	96	64.783	ENSORLG00020005972	trmt13	98	64.783	Oryzias_latipes_hni
ENSSMAG00000014592	trmt13	97	68.094	ENSORLG00015002270	trmt13	99	68.094	Oryzias_latipes_hsok
ENSSMAG00000014592	trmt13	98	68.085	ENSOMEG00000006724	trmt13	96	68.085	Oryzias_melastigma
ENSSMAG00000014592	trmt13	98	49.689	ENSOGAG00000005618	TRMT13	96	49.489	Otolemur_garnettii
ENSSMAG00000014592	trmt13	99	49.390	ENSOARG00000017983	TRMT13	99	49.390	Ovis_aries
ENSSMAG00000014592	trmt13	97	51.153	ENSPPAG00000043736	TRMT13	88	61.458	Pan_paniscus
ENSSMAG00000014592	trmt13	99	49.898	ENSPPRG00000003424	TRMT13	94	56.863	Panthera_pardus
ENSSMAG00000014592	trmt13	99	49.898	ENSPTIG00000018598	TRMT13	94	56.863	Panthera_tigris_altaica
ENSSMAG00000014592	trmt13	97	51.153	ENSPTRG00000001001	TRMT13	88	61.458	Pan_troglodytes
ENSSMAG00000014592	trmt13	99	50.511	ENSPANG00000007598	TRMT13	94	58.824	Papio_anubis
ENSSMAG00000014592	trmt13	96	53.362	ENSPKIG00000001514	trmt13	98	53.362	Paramormyrops_kingsleyae
ENSSMAG00000014592	trmt13	88	50.380	ENSPSIG00000012703	TRMT13	99	51.174	Pelodiscus_sinensis
ENSSMAG00000014592	trmt13	97	59.914	ENSPMGG00000013298	trmt13	94	60.043	Periophthalmus_magnuspinnatus
ENSSMAG00000014592	trmt13	97	49.375	ENSPEMG00000000275	Trmt13	97	49.375	Peromyscus_maniculatus_bairdii
ENSSMAG00000014592	trmt13	96	47.746	ENSPMAG00000000823	trmt13	99	47.581	Petromyzon_marinus
ENSSMAG00000014592	trmt13	99	48.975	ENSPCIG00000007699	TRMT13	99	49.180	Phascolarctos_cinereus
ENSSMAG00000014592	trmt13	95	65.721	ENSPFOG00000008675	trmt13	95	65.721	Poecilia_formosa
ENSSMAG00000014592	trmt13	96	66.022	ENSPLAG00000009709	trmt13	99	66.022	Poecilia_latipinna
ENSSMAG00000014592	trmt13	96	65.875	ENSPMEG00000022954	trmt13	99	65.875	Poecilia_mexicana
ENSSMAG00000014592	trmt13	78	69.231	ENSPREG00000005645	trmt13	94	64.211	Poecilia_reticulata
ENSSMAG00000014592	trmt13	96	50.840	ENSPPYG00000001120	TRMT13	96	50.840	Pongo_abelii
ENSSMAG00000014592	trmt13	97	50.210	ENSPCAG00000002340	TRMT13	96	50.210	Procavia_capensis
ENSSMAG00000014592	trmt13	97	50.314	ENSPCOG00000017984	TRMT13	96	50.314	Propithecus_coquereli
ENSSMAG00000014592	trmt13	98	49.897	ENSPVAG00000017430	TRMT13	98	49.897	Pteropus_vampyrus
ENSSMAG00000014592	trmt13	96	67.974	ENSPNYG00000013690	trmt13	99	67.974	Pundamilia_nyererei
ENSSMAG00000014592	trmt13	97	52.632	ENSPNAG00000022130	trmt13	99	52.632	Pygocentrus_nattereri
ENSSMAG00000014592	trmt13	97	49.792	ENSRNOG00000015140	Trmt13	94	49.792	Rattus_norvegicus
ENSSMAG00000014592	trmt13	99	50.511	ENSRBIG00000037686	TRMT13	94	58.824	Rhinopithecus_bieti
ENSSMAG00000014592	trmt13	99	50.511	ENSRROG00000044057	TRMT13	94	58.824	Rhinopithecus_roxellana
ENSSMAG00000014592	trmt13	99	50.509	ENSSBOG00000026541	TRMT13	94	57.843	Saimiri_boliviensis_boliviensis
ENSSMAG00000014592	trmt13	95	50.701	ENSSHAG00000005213	TRMT13	95	51.364	Sarcophilus_harrisii
ENSSMAG00000014592	trmt13	97	53.448	ENSSFOG00015017560	trmt13	98	53.448	Scleropages_formosus
ENSSMAG00000014592	trmt13	99	77.987	ENSSDUG00000015508	trmt13	99	77.386	Seriola_dumerili
ENSSMAG00000014592	trmt13	99	77.662	ENSSLDG00000019060	trmt13	99	77.662	Seriola_lalandi_dorsalis
ENSSMAG00000014592	trmt13	96	46.008	ENSSARG00000010344	TRMT13	97	46.008	Sorex_araneus
ENSSMAG00000014592	trmt13	94	52.061	ENSSPUG00000016339	TRMT13	98	52.061	Sphenodon_punctatus
ENSSMAG00000014592	trmt13	96	74.454	ENSSPAG00000011922	trmt13	98	74.454	Stegastes_partitus
ENSSMAG00000014592	trmt13	97	51.046	ENSSSCG00000006869	TRMT13	97	51.046	Sus_scrofa
ENSSMAG00000014592	trmt13	97	52.654	ENSTGUG00000005253	TRMT13	99	52.654	Taeniopygia_guttata
ENSSMAG00000014592	trmt13	96	65.236	ENSTRUG00000008400	trmt13	98	65.096	Takifugu_rubripes
ENSSMAG00000014592	trmt13	94	39.151	ENSTBEG00000008911	TRMT13	99	39.151	Tupaia_belangeri
ENSSMAG00000014592	trmt13	97	49.578	ENSUAMG00000017251	TRMT13	96	49.578	Ursus_americanus
ENSSMAG00000014592	trmt13	97	51.368	ENSUMAG00000007901	TRMT13	99	50.685	Ursus_maritimus
ENSSMAG00000014592	trmt13	95	39.907	ENSVPAG00000001034	TRMT13	98	41.055	Vicugna_pacos
ENSSMAG00000014592	trmt13	97	51.357	ENSVVUG00000021996	TRMT13	96	51.357	Vulpes_vulpes
ENSSMAG00000014592	trmt13	96	51.948	ENSXETG00000013204	trmt13	98	51.948	Xenopus_tropicalis
ENSSMAG00000014592	trmt13	96	63.793	ENSXMAG00000010765	trmt13	99	63.793	Xiphophorus_maculatus