EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000014640 (Gene tree)
Gene ID: -
Gene Symbol: mbd1b
Alias: mbd1|wu:fi45g12
Full Name: methyl-CpG binding domain protein 1b
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 13358 bases
Position: chr6:20781412-20794769
Accession: ZDB-GENE-030131-6318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000023968	MBD	PF01429.19	1.8e-13	1	1
ENSSMAP00000024000	MBD	PF01429.19	1.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000024255	-	6133	-	ENSSMAP00000023968	933 (aa)	-	-
ENSSMAT00000024289	-	5485	-	ENSSMAP00000024000	934 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000014640's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000014640's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000014640	mbd1b	82	73.575	ENSAPOG00000012810	mbd1b	96	71.588	Acanthochromis_polyacanthus
ENSSMAG00000014640	mbd1b	71	82.895	ENSACIG00000010590	mbd1b	81	82.895	Amphilophus_citrinellus
ENSSMAG00000014640	mbd1b	84	74.534	ENSAOCG00000020272	mbd1b	96	74.534	Amphiprion_ocellaris
ENSSMAG00000014640	mbd1b	84	74.534	ENSAPEG00000023230	mbd1b	96	74.534	Amphiprion_percula
ENSSMAG00000014640	mbd1b	82	76.973	ENSATEG00000009608	mbd1b	92	76.843	Anabas_testudineus
ENSSMAG00000014640	mbd1b	82	74.089	ENSACLG00000021383	mbd1b	93	72.659	Astatotilapia_calliptera
ENSSMAG00000014640	mbd1b	50	50.794	ENSCGRG00001014843	Mbd1	70	30.155	Cricetulus_griseus_chok1gshd
ENSSMAG00000014640	mbd1b	84	62.950	ENSCSEG00000009082	mbd1b	96	63.070	Cynoglossus_semilaevis
ENSSMAG00000014640	mbd1b	84	62.981	ENSCVAG00000001167	mbd1b	95	62.981	Cyprinodon_variegatus
ENSSMAG00000014640	mbd1b	82	36.196	ENSDARG00000025699	mbd1b	80	36.442	Danio_rerio
ENSSMAG00000014640	mbd1b	82	46.014	ENSELUG00000004375	mbd1b	90	45.400	Esox_lucius
ENSSMAG00000014640	mbd1b	84	63.693	ENSFHEG00000020120	mbd1b	95	63.693	Fundulus_heteroclitus
ENSSMAG00000014640	mbd1b	82	63.506	ENSGAFG00000008975	mbd1b	94	62.949	Gambusia_affinis
ENSSMAG00000014640	mbd1b	66	74.324	ENSGACG00000012106	-	99	74.324	Gasterosteus_aculeatus
ENSSMAG00000014640	mbd1b	82	74.870	ENSHBUG00000014270	mbd1b	93	72.909	Haplochromis_burtoni
ENSSMAG00000014640	mbd1b	81	59.001	ENSHCOG00000009952	mbd1b	92	59.264	Hippocampus_comes
ENSSMAG00000014640	mbd1b	82	38.471	ENSIPUG00000015243	-	85	49.367	Ictalurus_punctatus
ENSSMAG00000014640	mbd1b	79	67.647	ENSKMAG00000020760	mbd1b	94	64.808	Kryptolebias_marmoratus
ENSSMAG00000014640	mbd1b	59	39.634	ENSLACG00000002414	-	80	40.000	Latimeria_chalumnae
ENSSMAG00000014640	mbd1b	62	78.438	ENSMAMG00000023341	-	94	74.154	Mastacembelus_armatus
ENSSMAG00000014640	mbd1b	82	74.219	ENSMZEG00005010421	mbd1b	93	72.784	Maylandia_zebra
ENSSMAG00000014640	mbd1b	65	95.833	ENSMMOG00000011607	mbd1b	89	87.179	Mola_mola
ENSSMAG00000014640	mbd1b	85	74.257	ENSMALG00000007808	mbd1b	96	74.257	Monopterus_albus
ENSSMAG00000014640	mbd1b	82	75.130	ENSONIG00000020289	mbd1b	93	73.067	Oreochromis_niloticus
ENSSMAG00000014640	mbd1b	81	69.060	ENSORLG00000029390	mbd1b	92	68.333	Oryzias_latipes
ENSSMAG00000014640	mbd1b	83	68.846	ENSORLG00020000575	mbd1b	92	68.718	Oryzias_latipes_hni
ENSSMAG00000014640	mbd1b	83	69.270	ENSORLG00015014812	mbd1b	92	69.142	Oryzias_latipes_hsok
ENSSMAG00000014640	mbd1b	83	67.350	ENSOMEG00000023660	mbd1b	91	67.222	Oryzias_melastigma
ENSSMAG00000014640	mbd1b	56	35.338	ENSPCIG00000027937	-	53	44.578	Phascolarctos_cinereus
ENSSMAG00000014640	mbd1b	82	62.809	ENSPFOG00000007511	mbd1b	98	60.714	Poecilia_formosa
ENSSMAG00000014640	mbd1b	82	62.809	ENSPLAG00000021258	mbd1b	94	62.236	Poecilia_latipinna
ENSSMAG00000014640	mbd1b	82	62.939	ENSPMEG00000024145	mbd1b	94	62.438	Poecilia_mexicana
ENSSMAG00000014640	mbd1b	82	62.679	ENSPREG00000021805	mbd1b	92	62.642	Poecilia_reticulata
ENSSMAG00000014640	mbd1b	83	41.010	ENSPNAG00000018075	mbd1b	93	39.512	Pygocentrus_nattereri
ENSSMAG00000014640	mbd1b	67	49.686	ENSSFOG00015008591	-	64	50.932	Scleropages_formosus
ENSSMAG00000014640	mbd1b	82	82.315	ENSSDUG00000012996	mbd1b	86	81.795	Seriola_dumerili
ENSSMAG00000014640	mbd1b	57	85.987	ENSSLDG00000012422	mbd1b	76	85.987	Seriola_lalandi_dorsalis
ENSSMAG00000014640	mbd1b	84	75.561	ENSSPAG00000021447	mbd1b	94	75.561	Stegastes_partitus
ENSSMAG00000014640	mbd1b	85	65.087	ENSTRUG00000013422	mbd1b	95	65.044	Takifugu_rubripes
ENSSMAG00000014640	mbd1b	57	66.418	ENSTNIG00000007326	-	73	66.418	Tetraodon_nigroviridis
ENSSMAG00000014640	mbd1b	82	63.247	ENSXMAG00000005628	mbd1b	94	61.624	Xiphophorus_maculatus