EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000014680 (Gene tree)
Gene ID: -
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 6154 bases
Position: chr12:145935-152088
Accession: ZDB-GENE-030131-9687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000024017	RTC	PF01137.21	7.3e-86	1	1
ENSSMAP00000024017	RTC_insert	PF05189.13	2.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000024306	-	2293	-	ENSSMAP00000024017	370 (aa)	-	A0A2U9C5T4

Gene Model

Click here to download ENSSMAG00000014680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000014680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000014680	rtca	97	69.167	ENSG00000137996	RTCA	98	69.167	Homo_sapiens
ENSSMAG00000014680	rtca	97	87.709	ENSAPOG00000001345	rtca	98	87.709	Acanthochromis_polyacanthus
ENSSMAG00000014680	rtca	72	70.260	ENSAMEG00000008855	RTCA	100	70.260	Ailuropoda_melanoleuca
ENSSMAG00000014680	rtca	97	85.556	ENSACIG00000019643	rtca	99	85.556	Amphilophus_citrinellus
ENSSMAG00000014680	rtca	98	87.535	ENSAOCG00000014979	rtca	99	87.535	Amphiprion_ocellaris
ENSSMAG00000014680	rtca	98	87.535	ENSAPEG00000006945	rtca	99	87.535	Amphiprion_percula
ENSSMAG00000014680	rtca	94	86.533	ENSATEG00000006315	rtca	96	86.533	Anabas_testudineus
ENSSMAG00000014680	rtca	94	65.439	ENSAPLG00000015430	RTCA	100	65.439	Anas_platyrhynchos
ENSSMAG00000014680	rtca	97	69.722	ENSANAG00000025446	RTCA	98	69.722	Aotus_nancymaae
ENSSMAG00000014680	rtca	100	83.784	ENSACLG00000020770	rtca	100	83.784	Astatotilapia_calliptera
ENSSMAG00000014680	rtca	97	79.109	ENSAMXG00000043271	rtca	99	79.109	Astyanax_mexicanus
ENSSMAG00000014680	rtca	97	70.000	ENSBTAG00000006321	RTCA	98	70.000	Bos_taurus
ENSSMAG00000014680	rtca	97	69.444	ENSCJAG00000003398	RTCA	98	69.444	Callithrix_jacchus
ENSSMAG00000014680	rtca	97	68.889	ENSCAFG00000020010	RTCA	67	68.889	Canis_familiaris
ENSSMAG00000014680	rtca	97	68.889	ENSCAFG00020011528	RTCA	56	68.889	Canis_lupus_dingo
ENSSMAG00000014680	rtca	97	69.722	ENSCHIG00000018937	RTCA	98	69.722	Capra_hircus
ENSSMAG00000014680	rtca	97	69.167	ENSTSYG00000011305	RTCA	98	69.167	Carlito_syrichta
ENSSMAG00000014680	rtca	97	69.444	ENSCCAG00000021844	RTCA	97	70.642	Cebus_capucinus
ENSSMAG00000014680	rtca	97	66.756	ENSCATG00000019364	RTCA	100	68.608	Cercocebus_atys
ENSSMAG00000014680	rtca	85	70.570	ENSCLAG00000006125	RTCA	100	70.570	Chinchilla_lanigera
ENSSMAG00000014680	rtca	97	69.167	ENSCSAG00000001509	RTCA	98	69.167	Chlorocebus_sabaeus
ENSSMAG00000014680	rtca	97	68.056	ENSCHOG00000005211	RTCA	98	68.056	Choloepus_hoffmanni
ENSSMAG00000014680	rtca	97	66.574	ENSCPBG00000026658	RTCA	98	66.574	Chrysemys_picta_bellii
ENSSMAG00000014680	rtca	97	54.596	ENSCING00000007875	-	98	54.596	Ciona_intestinalis
ENSSMAG00000014680	rtca	95	54.674	ENSCSAVG00000007269	-	96	54.674	Ciona_savignyi
ENSSMAG00000014680	rtca	97	68.889	ENSCANG00000040106	RTCA	98	68.889	Colobus_angolensis_palliatus
ENSSMAG00000014680	rtca	72	69.517	ENSCGRG00001013163	Rtca	85	69.517	Cricetulus_griseus_chok1gshd
ENSSMAG00000014680	rtca	100	80.914	ENSCSEG00000000530	rtca	100	80.914	Cynoglossus_semilaevis
ENSSMAG00000014680	rtca	98	69.146	ENSCVAG00000021809	rtca	99	69.146	Cyprinodon_variegatus
ENSSMAG00000014680	rtca	97	77.374	ENSDARG00000002215	rtca	98	77.374	Danio_rerio
ENSSMAG00000014680	rtca	97	70.278	ENSDNOG00000000456	RTCA	98	70.278	Dasypus_novemcinctus
ENSSMAG00000014680	rtca	97	69.444	ENSDORG00000005448	Rtca	98	69.444	Dipodomys_ordii
ENSSMAG00000014680	rtca	96	39.326	FBgn0025630	Rtca	97	39.326	Drosophila_melanogaster
ENSSMAG00000014680	rtca	91	51.032	ENSEBUG00000008556	rtca	93	51.032	Eptatretus_burgeri
ENSSMAG00000014680	rtca	97	69.444	ENSEASG00005015926	RTCA	98	69.444	Equus_asinus_asinus
ENSSMAG00000014680	rtca	97	69.444	ENSECAG00000019831	RTCA	98	69.444	Equus_caballus
ENSSMAG00000014680	rtca	88	62.647	ENSEEUG00000001165	RTCA	98	62.647	Erinaceus_europaeus
ENSSMAG00000014680	rtca	97	77.374	ENSELUG00000003741	rtca	99	77.374	Esox_lucius
ENSSMAG00000014680	rtca	97	69.444	ENSFCAG00000024460	RTCA	98	69.444	Felis_catus
ENSSMAG00000014680	rtca	89	66.566	ENSFALG00000002443	RTCA	89	66.566	Ficedula_albicollis
ENSSMAG00000014680	rtca	97	68.333	ENSFDAG00000012070	-	98	68.333	Fukomys_damarensis
ENSSMAG00000014680	rtca	96	56.111	ENSFDAG00000016084	-	99	56.111	Fukomys_damarensis
ENSSMAG00000014680	rtca	55	87.129	ENSFHEG00000002868	rtca	92	82.791	Fundulus_heteroclitus
ENSSMAG00000014680	rtca	97	80.447	ENSGMOG00000013264	rtca	98	80.447	Gadus_morhua
ENSSMAG00000014680	rtca	97	66.017	ENSGALG00000005277	RTCA	98	66.017	Gallus_gallus
ENSSMAG00000014680	rtca	98	86.704	ENSGAFG00000011853	rtca	99	86.704	Gambusia_affinis
ENSSMAG00000014680	rtca	98	83.934	ENSGACG00000013497	rtca	99	83.934	Gasterosteus_aculeatus
ENSSMAG00000014680	rtca	77	66.551	ENSGAGG00000023306	RTCA	98	66.551	Gopherus_agassizii
ENSSMAG00000014680	rtca	97	68.056	ENSGGOG00000044018	-	98	68.056	Gorilla_gorilla
ENSSMAG00000014680	rtca	97	68.611	ENSGGOG00000009546	-	100	67.961	Gorilla_gorilla
ENSSMAG00000014680	rtca	100	83.514	ENSHBUG00000002114	rtca	100	83.514	Haplochromis_burtoni
ENSSMAG00000014680	rtca	97	68.889	ENSHGLG00000002617	RTCA	98	68.889	Heterocephalus_glaber_female
ENSSMAG00000014680	rtca	97	68.889	ENSHGLG00100006056	RTCA	98	68.889	Heterocephalus_glaber_male
ENSSMAG00000014680	rtca	97	76.667	ENSHCOG00000020628	rtca	88	76.667	Hippocampus_comes
ENSSMAG00000014680	rtca	97	78.056	ENSIPUG00000024803	rtca	99	78.056	Ictalurus_punctatus
ENSSMAG00000014680	rtca	97	61.389	ENSSTOG00000033099	-	98	61.389	Ictidomys_tridecemlineatus
ENSSMAG00000014680	rtca	97	65.000	ENSSTOG00000013528	-	93	70.755	Ictidomys_tridecemlineatus
ENSSMAG00000014680	rtca	97	50.696	ENSJJAG00000016178	Rtca	98	50.696	Jaculus_jaculus
ENSSMAG00000014680	rtca	97	86.667	ENSKMAG00000006651	rtca	98	86.667	Kryptolebias_marmoratus
ENSSMAG00000014680	rtca	86	87.461	ENSLBEG00000002448	-	99	87.461	Labrus_bergylta
ENSSMAG00000014680	rtca	98	86.704	ENSLBEG00000028971	rtca	99	86.704	Labrus_bergylta
ENSSMAG00000014680	rtca	97	65.460	ENSLACG00000013666	RTCA	98	65.460	Latimeria_chalumnae
ENSSMAG00000014680	rtca	96	76.338	ENSLOCG00000000093	rtca	97	76.338	Lepisosteus_oculatus
ENSSMAG00000014680	rtca	97	68.333	ENSLAFG00000001473	RTCA	98	68.333	Loxodonta_africana
ENSSMAG00000014680	rtca	97	69.167	ENSMFAG00000034132	RTCA	98	69.167	Macaca_fascicularis
ENSSMAG00000014680	rtca	97	69.167	ENSMMUG00000019105	RTCA	98	69.167	Macaca_mulatta
ENSSMAG00000014680	rtca	83	68.608	ENSMNEG00000037163	RTCA	100	68.608	Macaca_nemestrina
ENSSMAG00000014680	rtca	97	56.944	ENSMLEG00000042151	RTCA	98	56.944	Mandrillus_leucophaeus
ENSSMAG00000014680	rtca	98	86.704	ENSMAMG00000016536	rtca	99	86.704	Mastacembelus_armatus
ENSSMAG00000014680	rtca	100	83.784	ENSMZEG00005017945	rtca	100	83.784	Maylandia_zebra
ENSSMAG00000014680	rtca	86	66.667	ENSMGAG00000006892	RTCA	99	66.667	Meleagris_gallopavo
ENSSMAG00000014680	rtca	97	69.444	ENSMAUG00000008488	Rtca	98	69.444	Mesocricetus_auratus
ENSSMAG00000014680	rtca	83	69.903	ENSMICG00000008643	RTCA	100	69.903	Microcebus_murinus
ENSSMAG00000014680	rtca	97	68.611	ENSMOCG00000016660	Rtca	98	68.611	Microtus_ochrogaster
ENSSMAG00000014680	rtca	83	86.971	ENSMMOG00000007750	rtca	100	86.971	Mola_mola
ENSSMAG00000014680	rtca	96	69.468	ENSMODG00000003557	RTCA	98	69.468	Monodelphis_domestica
ENSSMAG00000014680	rtca	98	86.427	ENSMALG00000020844	rtca	99	86.427	Monopterus_albus
ENSSMAG00000014680	rtca	97	68.333	MGP_CAROLIEiJ_G0025565	Rtca	98	68.333	Mus_caroli
ENSSMAG00000014680	rtca	97	68.056	ENSMUSG00000000339	Rtca	100	66.197	Mus_musculus
ENSSMAG00000014680	rtca	97	68.333	MGP_PahariEiJ_G0027011	Rtca	98	68.333	Mus_pahari
ENSSMAG00000014680	rtca	97	68.611	MGP_SPRETEiJ_G0026515	Rtca	100	66.901	Mus_spretus
ENSSMAG00000014680	rtca	98	69.315	ENSMPUG00000012119	RTCA	99	69.315	Mustela_putorius_furo
ENSSMAG00000014680	rtca	97	66.759	ENSMLUG00000009922	RTCA	98	66.759	Myotis_lucifugus
ENSSMAG00000014680	rtca	97	68.333	ENSNGAG00000011540	Rtca	98	68.333	Nannospalax_galili
ENSSMAG00000014680	rtca	100	84.054	ENSNBRG00000003062	rtca	100	84.054	Neolamprologus_brichardi
ENSSMAG00000014680	rtca	97	68.889	ENSNLEG00000031426	RTCA	98	68.889	Nomascus_leucogenys
ENSSMAG00000014680	rtca	72	66.543	ENSOPRG00000012092	RTCA	71	66.543	Ochotona_princeps
ENSSMAG00000014680	rtca	94	68.678	ENSODEG00000006990	RTCA	96	68.946	Octodon_degus
ENSSMAG00000014680	rtca	100	84.054	ENSONIG00000007753	rtca	100	84.054	Oreochromis_niloticus
ENSSMAG00000014680	rtca	85	69.716	ENSOANG00000012055	RTCA	98	69.716	Ornithorhynchus_anatinus
ENSSMAG00000014680	rtca	97	69.167	ENSOCUG00000014247	RTCA	98	69.167	Oryctolagus_cuniculus
ENSSMAG00000014680	rtca	97	86.667	ENSORLG00000013605	rtca	99	86.667	Oryzias_latipes
ENSSMAG00000014680	rtca	97	86.944	ENSORLG00020001904	rtca	99	86.944	Oryzias_latipes_hni
ENSSMAG00000014680	rtca	97	86.944	ENSORLG00015021064	rtca	99	86.944	Oryzias_latipes_hsok
ENSSMAG00000014680	rtca	98	85.596	ENSOMEG00000000756	rtca	99	85.596	Oryzias_melastigma
ENSSMAG00000014680	rtca	97	63.333	ENSOGAG00000005627	RTCA	98	63.333	Otolemur_garnettii
ENSSMAG00000014680	rtca	85	69.811	ENSOARG00000018122	RTCA	100	69.811	Ovis_aries
ENSSMAG00000014680	rtca	97	66.220	ENSPPAG00000035119	RTCA	100	67.961	Pan_paniscus
ENSSMAG00000014680	rtca	97	69.722	ENSPPRG00000000350	RTCA	98	69.722	Panthera_pardus
ENSSMAG00000014680	rtca	97	69.444	ENSPTIG00000012816	RTCA	98	69.444	Panthera_tigris_altaica
ENSSMAG00000014680	rtca	97	66.220	ENSPTRG00000001004	RTCA	100	67.961	Pan_troglodytes
ENSSMAG00000014680	rtca	97	69.167	ENSPANG00000000346	RTCA	98	69.167	Papio_anubis
ENSSMAG00000014680	rtca	97	79.330	ENSPKIG00000001653	rtca	98	79.330	Paramormyrops_kingsleyae
ENSSMAG00000014680	rtca	97	66.574	ENSPSIG00000011408	RTCA	98	66.574	Pelodiscus_sinensis
ENSSMAG00000014680	rtca	97	69.167	ENSPEMG00000018582	Rtca	98	69.167	Peromyscus_maniculatus_bairdii
ENSSMAG00000014680	rtca	99	55.163	ENSPMAG00000009110	rtca	99	55.163	Petromyzon_marinus
ENSSMAG00000014680	rtca	97	68.889	ENSPCIG00000007684	RTCA	98	68.889	Phascolarctos_cinereus
ENSSMAG00000014680	rtca	98	86.188	ENSPFOG00000004824	rtca	99	86.188	Poecilia_formosa
ENSSMAG00000014680	rtca	100	84.865	ENSPLAG00000011753	rtca	100	84.865	Poecilia_latipinna
ENSSMAG00000014680	rtca	100	84.865	ENSPMEG00000020469	rtca	100	84.865	Poecilia_mexicana
ENSSMAG00000014680	rtca	98	85.319	ENSPREG00000001365	rtca	99	85.319	Poecilia_reticulata
ENSSMAG00000014680	rtca	97	69.167	ENSPPYG00000001115	RTCA	98	69.167	Pongo_abelii
ENSSMAG00000014680	rtca	97	66.389	ENSPCAG00000005076	RTCA	98	66.389	Procavia_capensis
ENSSMAG00000014680	rtca	97	69.722	ENSPCOG00000005603	RTCA	98	69.722	Propithecus_coquereli
ENSSMAG00000014680	rtca	97	65.952	ENSPVAG00000009478	RTCA	98	65.952	Pteropus_vampyrus
ENSSMAG00000014680	rtca	100	83.784	ENSPNYG00000004722	rtca	100	83.784	Pundamilia_nyererei
ENSSMAG00000014680	rtca	97	79.050	ENSPNAG00000022270	rtca	98	79.050	Pygocentrus_nattereri
ENSSMAG00000014680	rtca	97	67.778	ENSRNOG00000014575	Rtca	98	67.778	Rattus_norvegicus
ENSSMAG00000014680	rtca	97	66.756	ENSRBIG00000041180	RTCA	100	68.608	Rhinopithecus_bieti
ENSSMAG00000014680	rtca	97	69.167	ENSRROG00000024929	RTCA	98	69.167	Rhinopithecus_roxellana
ENSSMAG00000014680	rtca	97	68.889	ENSSBOG00000028626	RTCA	98	68.889	Saimiri_boliviensis_boliviensis
ENSSMAG00000014680	rtca	97	68.611	ENSSHAG00000001758	RTCA	98	68.611	Sarcophilus_harrisii
ENSSMAG00000014680	rtca	100	86.757	ENSSDUG00000015585	rtca	100	86.757	Seriola_dumerili
ENSSMAG00000014680	rtca	94	88.252	ENSSLDG00000018985	rtca	95	88.252	Seriola_lalandi_dorsalis
ENSSMAG00000014680	rtca	85	66.246	ENSSARG00000013993	RTCA	100	66.246	Sorex_araneus
ENSSMAG00000014680	rtca	98	86.150	ENSSPAG00000011938	rtca	99	86.150	Stegastes_partitus
ENSSMAG00000014680	rtca	97	69.722	ENSSSCG00000006865	RTCA	98	69.722	Sus_scrofa
ENSSMAG00000014680	rtca	97	66.574	ENSTGUG00000005154	RTCA	98	66.574	Taeniopygia_guttata
ENSSMAG00000014680	rtca	98	84.765	ENSTRUG00000008799	rtca	99	84.765	Takifugu_rubripes
ENSSMAG00000014680	rtca	98	85.042	ENSTNIG00000004725	rtca	99	85.042	Tetraodon_nigroviridis
ENSSMAG00000014680	rtca	56	54.808	ENSTBEG00000000943	RTCA	59	54.808	Tupaia_belangeri
ENSSMAG00000014680	rtca	97	67.292	ENSTTRG00000015327	RTCA	98	67.292	Tursiops_truncatus
ENSSMAG00000014680	rtca	91	68.843	ENSUAMG00000017265	RTCA	95	68.843	Ursus_americanus
ENSSMAG00000014680	rtca	97	68.889	ENSUMAG00000007881	RTCA	98	68.889	Ursus_maritimus
ENSSMAG00000014680	rtca	85	62.145	ENSVPAG00000001039	RTCA	84	62.145	Vicugna_pacos
ENSSMAG00000014680	rtca	97	68.889	ENSVVUG00000022041	RTCA	66	68.889	Vulpes_vulpes
ENSSMAG00000014680	rtca	96	56.906	ENSXETG00000031661	RTCA	98	56.906	Xenopus_tropicalis
ENSSMAG00000014680	rtca	98	74.238	ENSXCOG00000008002	rtca	99	74.238	Xiphophorus_couchianus
ENSSMAG00000014680	rtca	98	86.150	ENSXMAG00000005482	rtca	99	86.150	Xiphophorus_maculatus