EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000014720 (Gene tree)
Gene ID: -
Gene Symbol: e4f1
Alias: zgc:114190
Full Name: E4F transcription factor 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 6630 bases
Position: chr19:10485541-10492170
Accession: ZDB-GENE-050913-103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000024125	zf-C2H2	PF00096.26	4.8e-31	1	5
ENSSMAP00000024125	zf-C2H2	PF00096.26	4.8e-31	2	5
ENSSMAP00000024125	zf-C2H2	PF00096.26	4.8e-31	3	5
ENSSMAP00000024125	zf-C2H2	PF00096.26	4.8e-31	4	5
ENSSMAP00000024125	zf-C2H2	PF00096.26	4.8e-31	5	5
ENSSMAP00000024076	zf-C2H2	PF00096.26	1.2e-30	1	6
ENSSMAP00000024076	zf-C2H2	PF00096.26	1.2e-30	2	6
ENSSMAP00000024076	zf-C2H2	PF00096.26	1.2e-30	3	6
ENSSMAP00000024076	zf-C2H2	PF00096.26	1.2e-30	4	6
ENSSMAP00000024076	zf-C2H2	PF00096.26	1.2e-30	5	6
ENSSMAP00000024076	zf-C2H2	PF00096.26	1.2e-30	6	6
ENSSMAP00000024076	zf-C2H2_jaz	PF12171.8	5.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000024368	-	3483	-	ENSSMAP00000024076	705 (aa)	-	-
ENSSMAT00000024417	-	3392	-	ENSSMAP00000024125	773 (aa)	-	A0A2U9CSR1

Gene Model

Click here to download ENSSMAG00000014720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000014720's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000014720	e4f1	75	36.585	ENSSMAG00000014597	-	60	43.023
ENSSMAG00000014720	e4f1	66	41.667	ENSSMAG00000019980	-	62	41.667
ENSSMAG00000014720	e4f1	71	41.975	ENSSMAG00000018844	prdm5	56	41.573
ENSSMAG00000014720	e4f1	66	45.455	ENSSMAG00000013663	-	92	44.118
ENSSMAG00000014720	e4f1	66	35.484	ENSSMAG00000015356	-	82	37.500
ENSSMAG00000014720	e4f1	73	45.455	ENSSMAG00000021271	-	68	45.455
ENSSMAG00000014720	e4f1	71	38.667	ENSSMAG00000014864	-	83	40.260
ENSSMAG00000014720	e4f1	66	46.753	ENSSMAG00000007561	znf236	66	46.753
ENSSMAG00000014720	e4f1	72	34.568	ENSSMAG00000015282	-	74	44.706
ENSSMAG00000014720	e4f1	75	41.667	ENSSMAG00000015041	si:dkey-7i4.5	89	41.667
ENSSMAG00000014720	e4f1	69	48.052	ENSSMAG00000021251	-	99	48.052
ENSSMAG00000014720	e4f1	58	41.026	ENSSMAG00000013676	-	71	40.741
ENSSMAG00000014720	e4f1	64	37.037	ENSSMAG00000012378	znf646	59	37.037
ENSSMAG00000014720	e4f1	65	41.333	ENSSMAG00000015347	-	86	41.333
ENSSMAG00000014720	e4f1	52	48.000	ENSSMAG00000019949	-	87	46.667
ENSSMAG00000014720	e4f1	70	41.667	ENSSMAG00000006197	-	95	45.000
ENSSMAG00000014720	e4f1	70	35.878	ENSSMAG00000009115	-	96	41.250
ENSSMAG00000014720	e4f1	61	34.969	ENSSMAG00000007396	-	88	37.333
ENSSMAG00000014720	e4f1	57	40.000	ENSSMAG00000002391	ZNF319	86	40.000
ENSSMAG00000014720	e4f1	71	40.000	ENSSMAG00000013291	-	92	40.678
ENSSMAG00000014720	e4f1	53	43.750	ENSSMAG00000003594	-	86	43.750
ENSSMAG00000014720	e4f1	69	40.741	ENSSMAG00000005081	-	74	40.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000014720	e4f1	100	75.060	ENSCSEG00000015852	e4f1	98	74.578	Cynoglossus_semilaevis
ENSSMAG00000014720	e4f1	100	75.452	ENSCVAG00000002788	e4f1	100	75.452	Cyprinodon_variegatus
ENSSMAG00000014720	e4f1	99	72.670	ENSFHEG00000022551	e4f1	97	72.362	Fundulus_heteroclitus
ENSSMAG00000014720	e4f1	90	67.818	ENSGMOG00000011409	e4f1	100	67.661	Gadus_morhua
ENSSMAG00000014720	e4f1	100	77.548	ENSGACG00000011808	e4f1	100	78.323	Gasterosteus_aculeatus
ENSSMAG00000014720	e4f1	100	71.575	ENSHCOG00000016455	e4f1	100	70.769	Hippocampus_comes
ENSSMAG00000014720	e4f1	100	53.205	ENSIPUG00000005379	e4f1	99	51.531	Ictalurus_punctatus
ENSSMAG00000014720	e4f1	100	82.949	ENSLBEG00000026373	e4f1	100	82.564	Labrus_bergylta
ENSSMAG00000014720	e4f1	100	73.419	ENSMMOG00000007612	e4f1	100	72.000	Mola_mola
ENSSMAG00000014720	e4f1	99	84.483	ENSMALG00000007314	e4f1	100	82.171	Monopterus_albus
ENSSMAG00000014720	e4f1	100	76.062	ENSORLG00000009160	e4f1	100	75.418	Oryzias_latipes
ENSSMAG00000014720	e4f1	100	74.097	ENSORLG00020017974	e4f1	100	73.474	Oryzias_latipes_hni
ENSSMAG00000014720	e4f1	100	77.161	ENSORLG00015007385	e4f1	100	76.774	Oryzias_latipes_hsok
ENSSMAG00000014720	e4f1	100	77.490	ENSOMEG00000012220	e4f1	100	76.973	Oryzias_melastigma
ENSSMAG00000014720	e4f1	100	58.122	ENSPKIG00000001942	e4f1	99	56.818	Paramormyrops_kingsleyae
ENSSMAG00000014720	e4f1	92	87.000	ENSPMGG00000020527	e4f1	100	83.636	Periophthalmus_magnuspinnatus
ENSSMAG00000014720	e4f1	99	54.054	ENSSFOG00015021291	e4f1	98	60.217	Scleropages_formosus
ENSSMAG00000014720	e4f1	97	47.964	ENSSPUG00000011420	E4F1	95	47.545	Sphenodon_punctatus
ENSSMAG00000014720	e4f1	100	73.897	ENSTRUG00000005176	e4f1	100	75.567	Takifugu_rubripes
ENSSMAG00000014720	e4f1	98	74.085	ENSTNIG00000018001	e4f1	100	73.052	Tetraodon_nigroviridis
ENSSMAG00000014720	e4f1	74	70.796	ENSXETG00000016091	e4f1	99	70.796	Xenopus_tropicalis