EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000014819 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: fa12h12|sfrs6a|wu:fa12h12|wu:fa13e06|zgc:63770
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 1338 bases
Position: chr11:9185235-9186572
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000024276	RRM_1	PF00076.22	3.4e-13	1	1
ENSSMAP00000024293	RRM_1	PF00076.22	3.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000024569	-	729	-	ENSSMAP00000024276	242 (aa)	-	-
ENSSMAT00000024586	-	756	-	ENSSMAP00000024293	251 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000014819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000014819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000014819	-	85	48.058	ENSSMAG00000019728	srsf5b	63	48.214

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000014819	-	68	65.497	ENSACIG00000020091	-	67	63.725	Amphilophus_citrinellus
ENSSMAG00000014819	-	82	75.362	ENSACIG00000023658	-	65	73.874	Amphilophus_citrinellus
ENSSMAG00000014819	-	88	75.105	ENSAPEG00000013086	-	91	58.296	Amphiprion_percula
ENSSMAG00000014819	-	69	62.209	ENSAPEG00000020746	-	59	67.039	Amphiprion_percula
ENSSMAG00000014819	-	83	78.873	ENSATEG00000010679	-	84	79.476	Anabas_testudineus
ENSSMAG00000014819	-	71	62.326	ENSCSEG00000019782	SRSF6	52	90.323	Cynoglossus_semilaevis
ENSSMAG00000014819	-	63	62.500	ENSECAG00000023932	SRSF6	62	69.951	Equus_caballus
ENSSMAG00000014819	-	81	71.782	ENSELUG00000013506	SRSF6	93	71.008	Esox_lucius
ENSSMAG00000014819	-	85	76.818	ENSFHEG00000023065	srsf6a	91	64.091	Fundulus_heteroclitus
ENSSMAG00000014819	-	67	91.071	ENSGAFG00000019087	srsf6a	91	59.821	Gambusia_affinis
ENSSMAG00000014819	-	84	64.706	ENSGACG00000006084	srsf6a	70	76.271	Gasterosteus_aculeatus
ENSSMAG00000014819	-	60	65.644	ENSHBUG00000006386	-	90	67.544	Haplochromis_burtoni
ENSSMAG00000014819	-	75	46.269	ENSHGLG00000007701	-	60	64.641	Heterocephalus_glaber_female
ENSSMAG00000014819	-	81	77.340	ENSHCOG00000002740	srsf6a	68	71.622	Hippocampus_comes
ENSSMAG00000014819	-	75	69.780	ENSIPUG00000004776	-	63	68.687	Ictalurus_punctatus
ENSSMAG00000014819	-	83	73.077	ENSKMAG00000011934	srsf6a	91	63.303	Kryptolebias_marmoratus
ENSSMAG00000014819	-	83	70.233	ENSLACG00000005466	SRSF6	61	73.113	Latimeria_chalumnae
ENSSMAG00000014819	-	54	74.468	ENSMZEG00005008032	-	70	68.444	Maylandia_zebra
ENSSMAG00000014819	-	67	67.262	ENSMZEG00005020658	-	66	66.667	Maylandia_zebra
ENSSMAG00000014819	-	70	90.476	ENSMALG00000003702	srsf6a	50	90.909	Monopterus_albus
ENSSMAG00000014819	-	84	91.489	ENSNBRG00000001846	-	68	88.710	Neolamprologus_brichardi
ENSSMAG00000014819	-	83	71.362	ENSONIG00000001925	-	63	78.761	Oreochromis_niloticus
ENSSMAG00000014819	-	78	74.490	ENSPKIG00000018463	-	65	69.583	Paramormyrops_kingsleyae
ENSSMAG00000014819	-	84	78.873	ENSPMGG00000014963	srsf6a	68	70.614	Periophthalmus_magnuspinnatus
ENSSMAG00000014819	-	71	96.386	ENSPFOG00000006437	srsf6a	65	91.667	Poecilia_formosa
ENSSMAG00000014819	-	83	68.354	ENSPLAG00000009243	srsf6a	55	91.262	Poecilia_latipinna
ENSSMAG00000014819	-	83	72.973	ENSPMEG00000006042	SRSF6	70	74.380	Poecilia_mexicana
ENSSMAG00000014819	-	71	72.973	ENSPMEG00000006056	SRSF6	89	72.973	Poecilia_mexicana
ENSSMAG00000014819	-	63	49.083	ENSPNAG00000023145	-	75	78.000	Pygocentrus_nattereri
ENSSMAG00000014819	-	63	54.762	ENSPNAG00000013448	srsf6b	89	53.521	Pygocentrus_nattereri
ENSSMAG00000014819	-	84	66.825	ENSSFOG00015015169	SRSF6	64	75.500	Scleropages_formosus
ENSSMAG00000014819	-	83	72.768	ENSSLDG00000022841	srsf6a	74	74.576	Seriola_lalandi_dorsalis
ENSSMAG00000014819	-	76	75.543	ENSSPAG00000002362	srsf6a	90	75.771	Stegastes_partitus
ENSSMAG00000014819	-	83	75.962	ENSTNIG00000001692	srsf6a	71	73.707	Tetraodon_nigroviridis
ENSSMAG00000014819	-	83	75.349	ENSXMAG00000021849	srsf6a	91	59.821	Xiphophorus_maculatus