EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000015042 (Gene tree)
Gene ID: -
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 16457 bases
Position: chr19:10646305-10662761
Accession: ZDB-GENE-050522-431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000024641	Ribonuc_2-5A	PF06479.12	3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000024935	-	3258	-	ENSSMAP00000024641	1085 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000015042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000015042's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000015042	ern1	79	55.305	ENSSMAG00000021268	ern2	99	54.994

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000015042	ern1	96	89.089	ENSAPOG00000009999	ern1	99	87.201	Acanthochromis_polyacanthus
ENSSMAG00000015042	ern1	100	86.703	ENSACIG00000021716	ern1	100	86.703	Amphilophus_citrinellus
ENSSMAG00000015042	ern1	99	88.582	ENSAOCG00000012309	ern1	99	88.582	Amphiprion_ocellaris
ENSSMAG00000015042	ern1	99	88.122	ENSAPEG00000011263	ern1	98	92.641	Amphiprion_percula
ENSSMAG00000015042	ern1	100	88.553	ENSATEG00000024468	ern1	100	88.553	Anabas_testudineus
ENSSMAG00000015042	ern1	100	87.511	ENSACLG00000027919	ern1	100	87.511	Astatotilapia_calliptera
ENSSMAG00000015042	ern1	95	78.203	ENSAMXG00000000944	ern1	99	78.203	Astyanax_mexicanus
ENSSMAG00000015042	ern1	94	88.207	ENSCSEG00000014500	ern1	99	88.596	Cynoglossus_semilaevis
ENSSMAG00000015042	ern1	95	85.371	ENSCVAG00000002988	ern1	98	85.356	Cyprinodon_variegatus
ENSSMAG00000015042	ern1	89	81.148	ENSDARG00000013997	ern1	100	81.508	Danio_rerio
ENSSMAG00000015042	ern1	93	78.252	ENSELUG00000005957	ern1	97	78.447	Esox_lucius
ENSSMAG00000015042	ern1	98	83.835	ENSFHEG00000005578	ern1	99	83.835	Fundulus_heteroclitus
ENSSMAG00000015042	ern1	86	86.277	ENSGMOG00000011232	ern1	100	86.277	Gadus_morhua
ENSSMAG00000015042	ern1	96	85.496	ENSGAFG00000020231	ern1	97	85.496	Gambusia_affinis
ENSSMAG00000015042	ern1	86	90.996	ENSGACG00000011700	ern1	98	90.996	Gasterosteus_aculeatus
ENSSMAG00000015042	ern1	98	87.768	ENSHBUG00000012581	ern1	99	87.768	Haplochromis_burtoni
ENSSMAG00000015042	ern1	98	82.755	ENSHCOG00000016199	ern1	99	82.952	Hippocampus_comes
ENSSMAG00000015042	ern1	95	78.170	ENSIPUG00000011083	ern1	98	78.170	Ictalurus_punctatus
ENSSMAG00000015042	ern1	100	82.740	ENSKMAG00000019499	ern1	100	82.831	Kryptolebias_marmoratus
ENSSMAG00000015042	ern1	98	84.181	ENSLBEG00000025907	ern1	100	84.181	Labrus_bergylta
ENSSMAG00000015042	ern1	100	87.339	ENSMAMG00000023439	ern1	100	87.339	Mastacembelus_armatus
ENSSMAG00000015042	ern1	100	87.511	ENSMZEG00005003221	ern1	100	87.511	Maylandia_zebra
ENSSMAG00000015042	ern1	89	92.371	ENSMMOG00000007650	ern1	97	92.371	Mola_mola
ENSSMAG00000015042	ern1	99	85.701	ENSMALG00000017775	ern1	98	85.701	Monopterus_albus
ENSSMAG00000015042	ern1	98	86.928	ENSNBRG00000002179	ern1	99	86.928	Neolamprologus_brichardi
ENSSMAG00000015042	ern1	87	91.102	ENSONIG00000017169	ern1	98	91.102	Oreochromis_niloticus
ENSSMAG00000015042	ern1	98	84.201	ENSORLG00000008940	ern1	99	84.201	Oryzias_latipes
ENSSMAG00000015042	ern1	98	84.480	ENSORLG00020018387	ern1	99	84.480	Oryzias_latipes_hni
ENSSMAG00000015042	ern1	98	84.201	ENSORLG00015007946	ern1	99	84.201	Oryzias_latipes_hsok
ENSSMAG00000015042	ern1	98	84.137	ENSOMEG00000011741	ern1	99	84.137	Oryzias_melastigma
ENSSMAG00000015042	ern1	89	81.314	ENSPKIG00000005593	ern1	98	81.231	Paramormyrops_kingsleyae
ENSSMAG00000015042	ern1	95	85.274	ENSPMGG00000020442	ern1	97	86.341	Periophthalmus_magnuspinnatus
ENSSMAG00000015042	ern1	96	84.877	ENSPFOG00000007378	ern1	99	84.877	Poecilia_formosa
ENSSMAG00000015042	ern1	96	85.038	ENSPLAG00000014780	ern1	98	85.038	Poecilia_latipinna
ENSSMAG00000015042	ern1	95	86.320	ENSPMEG00000016324	ern1	96	87.538	Poecilia_mexicana
ENSSMAG00000015042	ern1	95	86.320	ENSPREG00000006286	ern1	97	86.002	Poecilia_reticulata
ENSSMAG00000015042	ern1	100	87.694	ENSPNYG00000017929	ern1	99	90.802	Pundamilia_nyererei
ENSSMAG00000015042	ern1	95	78.428	ENSPNAG00000029447	ern1	99	78.715	Pygocentrus_nattereri
ENSSMAG00000015042	ern1	100	90.164	ENSSDUG00000009098	ern1	100	90.164	Seriola_dumerili
ENSSMAG00000015042	ern1	100	89.800	ENSSLDG00000023254	ern1	100	89.800	Seriola_lalandi_dorsalis
ENSSMAG00000015042	ern1	99	86.849	ENSSPAG00000017539	ern1	99	87.091	Stegastes_partitus
ENSSMAG00000015042	ern1	91	87.563	ENSTRUG00000001041	ern1	95	87.563	Takifugu_rubripes
ENSSMAG00000015042	ern1	86	90.618	ENSTNIG00000017990	ern1	100	89.282	Tetraodon_nigroviridis
ENSSMAG00000015042	ern1	90	88.798	ENSXCOG00000010330	ern1	97	88.798	Xiphophorus_couchianus
ENSSMAG00000015042	ern1	96	85.496	ENSXMAG00000001310	ern1	97	85.496	Xiphophorus_maculatus