EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000015181 (Gene tree)
Gene ID: -
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcription repressor
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 3866 bases
Position: chr16:2929220-2933085
Accession: ZDB-GENE-091118-129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000024835	zf-C2H2	PF00096.26	1.1e-25	1	5
ENSSMAP00000024835	zf-C2H2	PF00096.26	1.1e-25	2	5
ENSSMAP00000024835	zf-C2H2	PF00096.26	1.1e-25	3	5
ENSSMAP00000024835	zf-C2H2	PF00096.26	1.1e-25	4	5
ENSSMAP00000024835	zf-C2H2	PF00096.26	1.1e-25	5	5
ENSSMAP00000024872	zf-C2H2	PF00096.26	1.2e-25	1	5
ENSSMAP00000024872	zf-C2H2	PF00096.26	1.2e-25	2	5
ENSSMAP00000024872	zf-C2H2	PF00096.26	1.2e-25	3	5
ENSSMAP00000024872	zf-C2H2	PF00096.26	1.2e-25	4	5
ENSSMAP00000024872	zf-C2H2	PF00096.26	1.2e-25	5	5
ENSSMAP00000024844	zf-C2H2	PF00096.26	1.4e-16	1	4
ENSSMAP00000024844	zf-C2H2	PF00096.26	1.4e-16	2	4
ENSSMAP00000024844	zf-C2H2	PF00096.26	1.4e-16	3	4
ENSSMAP00000024844	zf-C2H2	PF00096.26	1.4e-16	4	4
ENSSMAP00000024872	zf-met	PF12874.7	9.3e-09	1	2
ENSSMAP00000024872	zf-met	PF12874.7	9.3e-09	2	2
ENSSMAP00000024835	zf-met	PF12874.7	1.4e-08	1	2
ENSSMAP00000024835	zf-met	PF12874.7	1.4e-08	2	2
ENSSMAP00000024844	zf-met	PF12874.7	1.1e-06	1	2
ENSSMAP00000024844	zf-met	PF12874.7	1.1e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000025172	-	954	-	ENSSMAP00000024872	317 (aa)	-	-
ENSSMAT00000025135	-	1669	-	ENSSMAP00000024835	336 (aa)	-	-
ENSSMAT00000025144	-	1981	-	ENSSMAP00000024844	301 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000015181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000015181's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000015181	gfi1b	54	41.593	ENSSMAG00000012378	znf646	54	41.593
ENSSMAG00000015181	gfi1b	97	47.826	ENSSMAG00000017045	-	81	47.826
ENSSMAG00000015181	gfi1b	80	40.441	ENSSMAG00000013663	-	95	42.188
ENSSMAG00000015181	gfi1b	80	43.125	ENSSMAG00000021251	-	94	43.750
ENSSMAG00000015181	gfi1b	57	41.718	ENSSMAG00000014864	-	89	45.000
ENSSMAG00000015181	gfi1b	68	41.593	ENSSMAG00000009115	-	92	40.845
ENSSMAG00000015181	gfi1b	62	44.086	ENSSMAG00000007561	znf236	64	44.086
ENSSMAG00000015181	gfi1b	61	45.695	ENSSMAG00000005076	-	95	46.552
ENSSMAG00000015181	gfi1b	59	44.262	ENSSMAG00000006197	-	93	43.750
ENSSMAG00000015181	gfi1b	50	43.038	ENSSMAG00000014844	-	99	40.141
ENSSMAG00000015181	gfi1b	54	39.535	ENSSMAG00000014597	-	60	39.535
ENSSMAG00000015181	gfi1b	66	40.268	ENSSMAG00000019980	-	61	42.857
ENSSMAG00000015181	gfi1b	66	41.525	ENSSMAG00000007396	-	81	44.375
ENSSMAG00000015181	gfi1b	59	37.500	ENSSMAG00000021271	-	57	37.500
ENSSMAG00000015181	gfi1b	58	41.714	ENSSMAG00000006825	-	89	42.857
ENSSMAG00000015181	gfi1b	68	42.105	ENSSMAG00000013676	-	88	42.446
ENSSMAG00000015181	gfi1b	56	42.857	ENSSMAG00000002391	ZNF319	87	42.857
ENSSMAG00000015181	gfi1b	60	41.463	ENSSMAG00000018844	prdm5	73	41.463
ENSSMAG00000015181	gfi1b	55	37.931	ENSSMAG00000020844	patz1	64	38.824
ENSSMAG00000015181	gfi1b	61	49.351	ENSSMAG00000015356	-	93	43.810
ENSSMAG00000015181	gfi1b	69	31.313	ENSSMAG00000008308	-	59	35.758
ENSSMAG00000015181	gfi1b	87	41.250	ENSSMAG00000003594	-	98	39.831
ENSSMAG00000015181	gfi1b	52	31.138	ENSSMAG00000008834	-	54	33.019
ENSSMAG00000015181	gfi1b	62	44.025	ENSSMAG00000013828	-	64	44.025
ENSSMAG00000015181	gfi1b	60	44.311	ENSSMAG00000015347	-	82	44.311
ENSSMAG00000015181	gfi1b	61	34.682	ENSSMAG00000008907	zbtb41	61	34.682
ENSSMAG00000015181	gfi1b	97	50.900	ENSSMAG00000002782	gfi1ab	99	50.900
ENSSMAG00000015181	gfi1b	51	47.368	ENSSMAG00000009679	-	79	45.783
ENSSMAG00000015181	gfi1b	52	41.875	ENSSMAG00000015041	si:dkey-7i4.5	88	41.875
ENSSMAG00000015181	gfi1b	77	44.444	ENSSMAG00000015282	-	90	40.816
ENSSMAG00000015181	gfi1b	63	44.928	ENSSMAG00000006155	-	56	44.928
ENSSMAG00000015181	gfi1b	59	39.130	ENSSMAG00000005081	-	82	39.130
ENSSMAG00000015181	gfi1b	63	39.535	ENSSMAG00000004252	-	84	39.535
ENSSMAG00000015181	gfi1b	53	44.578	ENSSMAG00000004259	-	75	44.578
ENSSMAG00000015181	gfi1b	56	43.519	ENSSMAG00000009609	-	92	46.250
ENSSMAG00000015181	gfi1b	56	30.769	ENSSMAG00000001359	-	85	30.851
ENSSMAG00000015181	gfi1b	90	38.333	ENSSMAG00000007679	zbtb16b	57	38.333
ENSSMAG00000015181	gfi1b	50	37.762	ENSSMAG00000004429	-	81	37.762
ENSSMAG00000015181	gfi1b	80	32.677	ENSSMAG00000019949	-	64	45.312
ENSSMAG00000015181	gfi1b	50	35.032	ENSSMAG00000019364	snai2	98	34.746
ENSSMAG00000015181	gfi1b	69	45.000	ENSSMAG00000009685	-	93	45.000
ENSSMAG00000015181	gfi1b	51	45.946	ENSSMAG00000005122	-	50	45.946
ENSSMAG00000015181	gfi1b	56	42.857	ENSSMAG00000015849	znf319b	87	42.857
ENSSMAG00000015181	gfi1b	63	74.877	ENSSMAG00000006797	gfi1aa	99	49.510
ENSSMAG00000015181	gfi1b	92	40.741	ENSSMAG00000013291	-	91	40.854

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000015181	gfi1b	98	80.967	ENSAPOG00000001296	gfi1b	100	80.967	Acanthochromis_polyacanthus
ENSSMAG00000015181	gfi1b	99	70.794	ENSACIG00000002190	gfi1b	99	70.794	Amphilophus_citrinellus
ENSSMAG00000015181	gfi1b	98	81.459	ENSAOCG00000021187	gfi1b	100	81.459	Amphiprion_ocellaris
ENSSMAG00000015181	gfi1b	98	81.459	ENSAPEG00000016196	gfi1b	100	81.459	Amphiprion_percula
ENSSMAG00000015181	gfi1b	98	84.545	ENSATEG00000002534	gfi1b	100	84.545	Anabas_testudineus
ENSSMAG00000015181	gfi1b	99	58.036	ENSAPLG00000003373	GFI1B	100	57.602	Anas_platyrhynchos
ENSSMAG00000015181	gfi1b	99	73.700	ENSACLG00000027053	gfi1b	99	74.006	Astatotilapia_calliptera
ENSSMAG00000015181	gfi1b	99	71.513	ENSAMXG00000037544	GFI1B	99	72.836	Astyanax_mexicanus
ENSSMAG00000015181	gfi1b	99	58.967	ENSCAPG00000010404	GFI1B	99	60.060	Cavia_aperea
ENSSMAG00000015181	gfi1b	99	58.430	ENSCPBG00000021186	GFI1B	99	58.430	Chrysemys_picta_bellii
ENSSMAG00000015181	gfi1b	99	79.268	ENSCSEG00000001315	gfi1b	100	79.217	Cynoglossus_semilaevis
ENSSMAG00000015181	gfi1b	99	78.025	ENSCVAG00000017168	gfi1b	99	78.025	Cyprinodon_variegatus
ENSSMAG00000015181	gfi1b	98	70.674	ENSDARG00000079947	gfi1b	99	85.593	Danio_rerio
ENSSMAG00000015181	gfi1b	69	50.917	ENSEEUG00000012609	-	96	50.917	Erinaceus_europaeus
ENSSMAG00000015181	gfi1b	99	73.810	ENSELUG00000016933	gfi1b	99	75.522	Esox_lucius
ENSSMAG00000015181	gfi1b	99	53.425	ENSFALG00000001479	GFI1B	100	53.908	Ficedula_albicollis
ENSSMAG00000015181	gfi1b	98	81.763	ENSFHEG00000015138	gfi1b	100	81.763	Fundulus_heteroclitus
ENSSMAG00000015181	gfi1b	99	68.571	ENSGMOG00000019123	gfi1b	91	82.716	Gadus_morhua
ENSSMAG00000015181	gfi1b	99	58.580	ENSGALG00000003478	GFI1B	100	58.772	Gallus_gallus
ENSSMAG00000015181	gfi1b	74	91.845	ENSGAFG00000003059	gfi1b	100	91.453	Gambusia_affinis
ENSSMAG00000015181	gfi1b	99	73.295	ENSGACG00000018134	gfi1b	100	74.085	Gasterosteus_aculeatus
ENSSMAG00000015181	gfi1b	99	60.060	ENSGAGG00000021327	GFI1B	99	60.060	Gopherus_agassizii
ENSSMAG00000015181	gfi1b	99	73.700	ENSHBUG00000005451	gfi1b	99	74.006	Haplochromis_burtoni
ENSSMAG00000015181	gfi1b	99	78.056	ENSHCOG00000013713	gfi1b	99	78.056	Hippocampus_comes
ENSSMAG00000015181	gfi1b	99	71.171	ENSIPUG00000012769	gfi1b	100	70.796	Ictalurus_punctatus
ENSSMAG00000015181	gfi1b	99	51.451	ENSJJAG00000016355	Gfi1b	100	52.231	Jaculus_jaculus
ENSSMAG00000015181	gfi1b	99	80.878	ENSKMAG00000016047	gfi1b	99	80.878	Kryptolebias_marmoratus
ENSSMAG00000015181	gfi1b	99	79.403	ENSLBEG00000020297	gfi1b	100	80.299	Labrus_bergylta
ENSSMAG00000015181	gfi1b	99	60.790	ENSLACG00000012207	GFI1B	99	60.790	Latimeria_chalumnae
ENSSMAG00000015181	gfi1b	99	69.461	ENSLOCG00000005750	gfi1b	100	68.805	Lepisosteus_oculatus
ENSSMAG00000015181	gfi1b	99	60.000	ENSLAFG00000022367	GFI1B	99	60.000	Loxodonta_africana
ENSSMAG00000015181	gfi1b	99	85.329	ENSMAMG00000003040	gfi1b	100	86.322	Mastacembelus_armatus
ENSSMAG00000015181	gfi1b	99	73.394	ENSMZEG00005015594	gfi1b	99	73.700	Maylandia_zebra
ENSSMAG00000015181	gfi1b	99	58.580	ENSMGAG00000006129	GFI1B	99	58.580	Meleagris_gallopavo
ENSSMAG00000015181	gfi1b	98	82.121	ENSMMOG00000011764	gfi1b	100	82.121	Mola_mola
ENSSMAG00000015181	gfi1b	99	53.005	ENSMODG00000012600	GFI1B	99	53.591	Monodelphis_domestica
ENSSMAG00000015181	gfi1b	98	84.195	ENSMALG00000004034	gfi1b	100	84.195	Monopterus_albus
ENSSMAG00000015181	gfi1b	99	59.760	ENSNGAG00000003333	Gfi1b	100	59.941	Nannospalax_galili
ENSSMAG00000015181	gfi1b	99	74.390	ENSNBRG00000012391	gfi1b	99	74.695	Neolamprologus_brichardi
ENSSMAG00000015181	gfi1b	99	74.085	ENSONIG00000013011	gfi1b	95	91.061	Oreochromis_niloticus
ENSSMAG00000015181	gfi1b	99	61.180	ENSOANG00000014723	GFI1B	99	61.180	Ornithorhynchus_anatinus
ENSSMAG00000015181	gfi1b	90	73.801	ENSORLG00000014390	GFI1B	96	72.563	Oryzias_latipes
ENSSMAG00000015181	gfi1b	98	77.204	ENSORLG00020003719	GFI1B	100	77.204	Oryzias_latipes_hni
ENSSMAG00000015181	gfi1b	98	76.596	ENSORLG00015017142	gfi1b	100	76.596	Oryzias_latipes_hsok
ENSSMAG00000015181	gfi1b	99	74.233	ENSOMEG00000015149	GFI1B	100	75.380	Oryzias_melastigma
ENSSMAG00000015181	gfi1b	99	56.522	ENSOGAG00000008879	GFI1B	99	56.936	Otolemur_garnettii
ENSSMAG00000015181	gfi1b	99	71.045	ENSPKIG00000007643	gfi1b	99	71.045	Paramormyrops_kingsleyae
ENSSMAG00000015181	gfi1b	99	60.465	ENSPSIG00000012112	GFI1B	99	60.465	Pelodiscus_sinensis
ENSSMAG00000015181	gfi1b	99	69.159	ENSPMGG00000006021	gfi1b	99	70.359	Periophthalmus_magnuspinnatus
ENSSMAG00000015181	gfi1b	99	52.747	ENSPCIG00000019724	GFI1B	99	53.279	Phascolarctos_cinereus
ENSSMAG00000015181	gfi1b	99	79.701	ENSPFOG00000003460	gfi1b	100	80.357	Poecilia_formosa
ENSSMAG00000015181	gfi1b	99	81.155	ENSPLAG00000021960	GFI1B	100	81.515	Poecilia_latipinna
ENSSMAG00000015181	gfi1b	99	78.466	ENSPLAG00000017181	GFI1B	100	79.412	Poecilia_latipinna
ENSSMAG00000015181	gfi1b	99	81.459	ENSPMEG00000019220	gfi1b	100	82.121	Poecilia_mexicana
ENSSMAG00000015181	gfi1b	99	81.459	ENSPMEG00000001556	GFI1B	100	82.121	Poecilia_mexicana
ENSSMAG00000015181	gfi1b	99	81.459	ENSPREG00000021718	gfi1b	100	82.121	Poecilia_reticulata
ENSSMAG00000015181	gfi1b	99	74.613	ENSPNYG00000018422	gfi1b	99	74.613	Pundamilia_nyererei
ENSSMAG00000015181	gfi1b	99	71.471	ENSPNAG00000021118	gfi1b	99	71.988	Pygocentrus_nattereri
ENSSMAG00000015181	gfi1b	99	48.229	ENSSHAG00000006462	GFI1B	99	49.326	Sarcophilus_harrisii
ENSSMAG00000015181	gfi1b	90	63.669	ENSSFOG00015011566	gfi1b	90	63.571	Scleropages_formosus
ENSSMAG00000015181	gfi1b	98	87.842	ENSSDUG00000011604	gfi1b	100	87.842	Seriola_dumerili
ENSSMAG00000015181	gfi1b	98	87.234	ENSSLDG00000013823	gfi1b	100	87.234	Seriola_lalandi_dorsalis
ENSSMAG00000015181	gfi1b	99	49.128	ENSSPUG00000016039	GFI1B	100	49.709	Sphenodon_punctatus
ENSSMAG00000015181	gfi1b	98	83.333	ENSSPAG00000022914	gfi1b	100	83.333	Stegastes_partitus
ENSSMAG00000015181	gfi1b	52	92.035	ENSTGUG00000005282	-	99	98.214	Taeniopygia_guttata
ENSSMAG00000015181	gfi1b	58	57.025	ENSTGUG00000015953	-	63	57.025	Taeniopygia_guttata
ENSSMAG00000015181	gfi1b	98	77.508	ENSTRUG00000004525	gfi1b	100	77.508	Takifugu_rubripes
ENSSMAG00000015181	gfi1b	99	75.229	ENSTNIG00000003834	gfi1b	100	76.061	Tetraodon_nigroviridis
ENSSMAG00000015181	gfi1b	99	43.452	ENSTBEG00000014459	GFI1B	99	43.452	Tupaia_belangeri
ENSSMAG00000015181	gfi1b	99	56.418	ENSXETG00000006263	gfi1b	100	57.612	Xenopus_tropicalis
ENSSMAG00000015181	gfi1b	99	80.547	ENSXMAG00000027589	gfi1b	100	81.212	Xiphophorus_maculatus