EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000015342 (Gene tree)
Gene ID: -
Gene Symbol: srrt
Alias: CHUNP6881|ars2|zgc:92060
Full Name: serrate RNA effector molecule homolog (Arabidopsis)
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 8021 bases
Position: chr4:13232739-13240759
Accession: ZDB-GENE-020419-13
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000025271	ARS2	PF04959.13	5.9e-89	1	1
ENSSMAP00000025233	ARS2	PF04959.13	6.5e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000025572	-	2490	-	ENSSMAP00000025271	829 (aa)	-	-
ENSSMAT00000025534	-	2988	-	ENSSMAP00000025233	874 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000015342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000015342's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000015342	srrt	54	64.363	ENSSMAG00000018195	-	94	55.189

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000015342	srrt	54	76.201	ENSG00000087087	SRRT	98	83.871	Homo_sapiens
ENSSMAG00000015342	srrt	95	89.417	ENSAPOG00000002304	srrt	95	91.201	Acanthochromis_polyacanthus
ENSSMAG00000015342	srrt	96	65.318	ENSAMEG00000014506	SRRT	95	64.678	Ailuropoda_melanoleuca
ENSSMAG00000015342	srrt	95	87.722	ENSACIG00000015795	srrt	89	92.998	Amphilophus_citrinellus
ENSSMAG00000015342	srrt	93	56.161	ENSAOCG00000009189	-	94	58.534	Amphiprion_ocellaris
ENSSMAG00000015342	srrt	95	89.750	ENSAOCG00000009693	srrt	95	91.180	Amphiprion_ocellaris
ENSSMAG00000015342	srrt	93	94.967	ENSAPEG00000003646	srrt	95	90.584	Amphiprion_percula
ENSSMAG00000015342	srrt	93	56.161	ENSAPEG00000020016	-	94	58.534	Amphiprion_percula
ENSSMAG00000015342	srrt	93	93.202	ENSATEG00000014425	srrt	95	88.995	Anabas_testudineus
ENSSMAG00000015342	srrt	60	62.011	ENSATEG00000003652	-	85	63.808	Anabas_testudineus
ENSSMAG00000015342	srrt	95	65.670	ENSACAG00000001014	SRRT	95	65.444	Anolis_carolinensis
ENSSMAG00000015342	srrt	54	75.054	ENSANAG00000031718	SRRT	95	65.187	Aotus_nancymaae
ENSSMAG00000015342	srrt	93	92.967	ENSACLG00000013156	srrt	92	89.367	Astatotilapia_calliptera
ENSSMAG00000015342	srrt	92	65.458	ENSACLG00000009423	-	89	66.523	Astatotilapia_calliptera
ENSSMAG00000015342	srrt	54	74.409	ENSBTAG00000001134	SRRT	95	63.636	Bos_taurus
ENSSMAG00000015342	srrt	76	38.831	WBGene00017085	E01A2.2	85	41.822	Caenorhabditis_elegans
ENSSMAG00000015342	srrt	54	74.839	ENSCJAG00000014917	SRRT	95	65.070	Callithrix_jacchus
ENSSMAG00000015342	srrt	96	64.651	ENSCAFG00000023538	SRRT	95	64.261	Canis_familiaris
ENSSMAG00000015342	srrt	98	63.470	ENSCAFG00020013358	SRRT	99	61.951	Canis_lupus_dingo
ENSSMAG00000015342	srrt	88	74.620	ENSCHIG00000010495	SRRT	95	63.795	Capra_hircus
ENSSMAG00000015342	srrt	88	72.017	ENSTSYG00000036426	SRRT	99	63.572	Carlito_syrichta
ENSSMAG00000015342	srrt	88	75.771	ENSCAPG00000013586	SRRT	99	64.458	Cavia_aperea
ENSSMAG00000015342	srrt	96	63.953	ENSCPOG00000001739	SRRT	95	64.252	Cavia_porcellus
ENSSMAG00000015342	srrt	54	75.054	ENSCCAG00000015877	SRRT	95	65.187	Cebus_capucinus
ENSSMAG00000015342	srrt	85	73.362	ENSCATG00000036306	SRRT	97	63.963	Cercocebus_atys
ENSSMAG00000015342	srrt	96	64.819	ENSCLAG00000007568	SRRT	95	64.848	Chinchilla_lanigera
ENSSMAG00000015342	srrt	54	75.054	ENSCSAG00000017996	SRRT	95	64.795	Chlorocebus_sabaeus
ENSSMAG00000015342	srrt	54	72.593	ENSCHOG00000007815	SRRT	68	70.740	Choloepus_hoffmanni
ENSSMAG00000015342	srrt	95	53.216	ENSCPBG00000011553	SRRT	82	66.415	Chrysemys_picta_bellii
ENSSMAG00000015342	srrt	100	42.316	ENSCING00000003506	-	86	44.887	Ciona_intestinalis
ENSSMAG00000015342	srrt	93	50.547	ENSCSAVG00000008394	-	81	55.556	Ciona_savignyi
ENSSMAG00000015342	srrt	82	75.054	ENSCANG00000034556	SRRT	95	64.747	Colobus_angolensis_palliatus
ENSSMAG00000015342	srrt	96	65.313	ENSCGRG00001001594	Srrt	95	65.070	Cricetulus_griseus_chok1gshd
ENSSMAG00000015342	srrt	96	60.809	ENSCGRG00000007292	Srrt	89	70.726	Cricetulus_griseus_crigri
ENSSMAG00000015342	srrt	55	65.458	ENSCSEG00000005233	-	94	55.381	Cynoglossus_semilaevis
ENSSMAG00000015342	srrt	98	81.223	ENSCSEG00000017878	srrt	95	79.905	Cynoglossus_semilaevis
ENSSMAG00000015342	srrt	90	55.860	ENSCVAG00000017344	-	94	55.541	Cyprinodon_variegatus
ENSSMAG00000015342	srrt	95	87.709	ENSCVAG00000019848	srrt	95	86.158	Cyprinodon_variegatus
ENSSMAG00000015342	srrt	96	77.817	ENSDARG00000017762	srrt	95	78.000	Danio_rerio
ENSSMAG00000015342	srrt	54	75.054	ENSDNOG00000003851	SRRT	95	64.795	Dasypus_novemcinctus
ENSSMAG00000015342	srrt	96	64.761	ENSDORG00000005584	Srrt	95	65.060	Dipodomys_ordii
ENSSMAG00000015342	srrt	97	49.609	FBgn0033062	Ars2	77	52.991	Drosophila_melanogaster
ENSSMAG00000015342	srrt	78	72.304	ENSETEG00000016175	SRRT	71	72.078	Echinops_telfairi
ENSSMAG00000015342	srrt	76	53.787	ENSEBUG00000008517	-	88	53.033	Eptatretus_burgeri
ENSSMAG00000015342	srrt	96	64.959	ENSEASG00005016956	SRRT	95	64.610	Equus_asinus_asinus
ENSSMAG00000015342	srrt	96	64.959	ENSECAG00000012292	SRRT	95	64.494	Equus_caballus
ENSSMAG00000015342	srrt	81	80.208	ENSEEUG00000009117	SRRT	81	80.435	Erinaceus_europaeus
ENSSMAG00000015342	srrt	93	59.482	ENSELUG00000021216	-	94	59.139	Esox_lucius
ENSSMAG00000015342	srrt	88	83.878	ENSELUG00000006651	srrt	82	84.348	Esox_lucius
ENSSMAG00000015342	srrt	96	64.419	ENSFCAG00000006855	SRRT	95	64.377	Felis_catus
ENSSMAG00000015342	srrt	55	52.318	ENSFALG00000007524	-	99	34.709	Ficedula_albicollis
ENSSMAG00000015342	srrt	54	71.397	ENSFDAG00000021347	SRRT	95	62.840	Fukomys_damarensis
ENSSMAG00000015342	srrt	80	90.873	ENSFHEG00000002756	srrt	90	90.873	Fundulus_heteroclitus
ENSSMAG00000015342	srrt	56	57.557	ENSFHEG00000004105	-	93	58.174	Fundulus_heteroclitus
ENSSMAG00000015342	srrt	66	66.893	ENSGMOG00000018694	-	84	56.224	Gadus_morhua
ENSSMAG00000015342	srrt	96	75.357	ENSGMOG00000018619	srrt	93	75.152	Gadus_morhua
ENSSMAG00000015342	srrt	95	87.216	ENSGAFG00000005423	srrt	95	87.216	Gambusia_affinis
ENSSMAG00000015342	srrt	92	56.522	ENSGAFG00000020383	-	94	57.377	Gambusia_affinis
ENSSMAG00000015342	srrt	93	55.648	ENSGACG00000001100	-	94	56.615	Gasterosteus_aculeatus
ENSSMAG00000015342	srrt	96	88.389	ENSGACG00000020387	srrt	95	88.124	Gasterosteus_aculeatus
ENSSMAG00000015342	srrt	86	75.054	ENSGGOG00000001508	SRRT	96	64.865	Gorilla_gorilla
ENSSMAG00000015342	srrt	93	92.747	ENSHBUG00000002942	srrt	92	89.486	Haplochromis_burtoni
ENSSMAG00000015342	srrt	96	64.849	ENSHGLG00000008344	Srrt	95	64.527	Heterocephalus_glaber_female
ENSSMAG00000015342	srrt	96	65.070	ENSHGLG00100018857	Srrt	95	64.747	Heterocephalus_glaber_male
ENSSMAG00000015342	srrt	98	83.897	ENSHCOG00000005403	srrt	95	83.971	Hippocampus_comes
ENSSMAG00000015342	srrt	93	55.583	ENSHCOG00000008904	-	94	57.125	Hippocampus_comes
ENSSMAG00000015342	srrt	93	74.548	ENSIPUG00000021150	srrt	95	73.302	Ictalurus_punctatus
ENSSMAG00000015342	srrt	96	65.187	ENSSTOG00000013776	SRRT	95	64.982	Ictidomys_tridecemlineatus
ENSSMAG00000015342	srrt	96	65.294	ENSJJAG00000010446	Srrt	95	65.655	Jaculus_jaculus
ENSSMAG00000015342	srrt	89	91.026	ENSKMAG00000013599	srrt	95	86.223	Kryptolebias_marmoratus
ENSSMAG00000015342	srrt	52	64.780	ENSKMAG00000008468	-	94	54.816	Kryptolebias_marmoratus
ENSSMAG00000015342	srrt	98	87.019	ENSLBEG00000016308	srrt	95	84.211	Labrus_bergylta
ENSSMAG00000015342	srrt	64	65.132	ENSLBEG00000028983	-	81	67.368	Labrus_bergylta
ENSSMAG00000015342	srrt	95	55.936	ENSLACG00000001089	SRRT	95	56.601	Latimeria_chalumnae
ENSSMAG00000015342	srrt	81	83.228	ENSLOCG00000013658	srrt	78	83.544	Lepisosteus_oculatus
ENSSMAG00000015342	srrt	96	64.884	ENSLAFG00000007725	SRRT	95	65.263	Loxodonta_africana
ENSSMAG00000015342	srrt	86	73.573	ENSMFAG00000033745	SRRT	99	64.079	Macaca_fascicularis
ENSSMAG00000015342	srrt	96	63.771	ENSMMUG00000021255	SRRT	95	64.795	Macaca_mulatta
ENSSMAG00000015342	srrt	87	73.573	ENSMNEG00000041864	SRRT	97	64.079	Macaca_nemestrina
ENSSMAG00000015342	srrt	87	73.573	ENSMLEG00000029479	SRRT	98	64.079	Mandrillus_leucophaeus
ENSSMAG00000015342	srrt	95	89.701	ENSMAMG00000014311	srrt	95	91.018	Mastacembelus_armatus
ENSSMAG00000015342	srrt	93	57.022	ENSMAMG00000010681	-	94	55.476	Mastacembelus_armatus
ENSSMAG00000015342	srrt	93	92.967	ENSMZEG00005016135	srrt	92	89.486	Maylandia_zebra
ENSSMAG00000015342	srrt	92	65.672	ENSMZEG00005028002	-	89	66.739	Maylandia_zebra
ENSSMAG00000015342	srrt	54	74.624	ENSMAUG00000011386	Srrt	95	64.747	Mesocricetus_auratus
ENSSMAG00000015342	srrt	92	73.573	ENSMICG00000009471	SRRT	97	64.079	Microcebus_murinus
ENSSMAG00000015342	srrt	96	64.733	ENSMOCG00000001971	Srrt	95	65.845	Microtus_ochrogaster
ENSSMAG00000015342	srrt	83	56.242	ENSMMOG00000011137	-	99	50.835	Mola_mola
ENSSMAG00000015342	srrt	95	87.406	ENSMMOG00000016399	srrt	95	87.673	Mola_mola
ENSSMAG00000015342	srrt	54	70.940	ENSMODG00000004862	SRRT	89	70.940	Monodelphis_domestica
ENSSMAG00000015342	srrt	98	76.345	ENSMALG00000018604	srrt	99	81.677	Monopterus_albus
ENSSMAG00000015342	srrt	69	46.181	ENSMALG00000005567	-	100	45.941	Monopterus_albus
ENSSMAG00000015342	srrt	96	65.380	MGP_CAROLIEiJ_G0027870	Srrt	99	70.037	Mus_caroli
ENSSMAG00000015342	srrt	96	65.380	ENSMUSG00000037364	Srrt	99	70.037	Mus_musculus
ENSSMAG00000015342	srrt	96	65.192	MGP_PahariEiJ_G0024456	Srrt	99	70.037	Mus_pahari
ENSSMAG00000015342	srrt	96	65.380	MGP_SPRETEiJ_G0028875	Srrt	99	70.037	Mus_spretus
ENSSMAG00000015342	srrt	96	65.000	ENSMPUG00000015839	SRRT	95	64.494	Mustela_putorius_furo
ENSSMAG00000015342	srrt	54	74.839	ENSMLUG00000009975	SRRT	95	64.377	Myotis_lucifugus
ENSSMAG00000015342	srrt	96	65.698	ENSNGAG00000023715	Srrt	100	64.439	Nannospalax_galili
ENSSMAG00000015342	srrt	98	88.215	ENSNBRG00000019100	srrt	95	88.263	Neolamprologus_brichardi
ENSSMAG00000015342	srrt	86	64.758	ENSNLEG00000011987	SRRT	94	63.399	Nomascus_leucogenys
ENSSMAG00000015342	srrt	96	55.336	ENSMEUG00000011941	SRRT	94	54.051	Notamacropus_eugenii
ENSSMAG00000015342	srrt	64	74.242	ENSOPRG00000002502	-	67	74.242	Ochotona_princeps
ENSSMAG00000015342	srrt	96	65.294	ENSODEG00000016856	SRRT	95	65.166	Octodon_degus
ENSSMAG00000015342	srrt	93	55.634	ENSONIG00000016080	-	94	54.759	Oreochromis_niloticus
ENSSMAG00000015342	srrt	93	93.187	ENSONIG00000004242	srrt	92	88.186	Oreochromis_niloticus
ENSSMAG00000015342	srrt	98	84.732	ENSORLG00000008120	srrt	95	83.593	Oryzias_latipes
ENSSMAG00000015342	srrt	98	84.848	ENSORLG00020003058	srrt	95	83.593	Oryzias_latipes_hni
ENSSMAG00000015342	srrt	98	85.315	ENSORLG00015008062	srrt	95	83.593	Oryzias_latipes_hsok
ENSSMAG00000015342	srrt	92	59.153	ENSOMEG00000006963	-	94	59.390	Oryzias_melastigma
ENSSMAG00000015342	srrt	98	85.548	ENSOMEG00000003155	srrt	89	91.886	Oryzias_melastigma
ENSSMAG00000015342	srrt	54	75.054	ENSOGAG00000017242	SRRT	95	64.833	Otolemur_garnettii
ENSSMAG00000015342	srrt	54	74.403	ENSOARG00000015645	SRRT	95	63.626	Ovis_aries
ENSSMAG00000015342	srrt	54	75.054	ENSPPAG00000041090	SRRT	97	63.310	Pan_paniscus
ENSSMAG00000015342	srrt	54	75.488	ENSPPRG00000009557	SRRT	95	64.628	Panthera_pardus
ENSSMAG00000015342	srrt	96	64.277	ENSPTIG00000014355	SRRT	95	64.797	Panthera_tigris_altaica
ENSSMAG00000015342	srrt	54	75.054	ENSPTRG00000019511	SRRT	99	62.676	Pan_troglodytes
ENSSMAG00000015342	srrt	84	73.573	ENSPANG00000020763	SRRT	96	64.079	Papio_anubis
ENSSMAG00000015342	srrt	92	80.550	ENSPKIG00000005434	srrt	95	74.356	Paramormyrops_kingsleyae
ENSSMAG00000015342	srrt	94	72.859	ENSPKIG00000022212	-	95	71.581	Paramormyrops_kingsleyae
ENSSMAG00000015342	srrt	95	65.680	ENSPSIG00000016311	SRRT	95	66.071	Pelodiscus_sinensis
ENSSMAG00000015342	srrt	98	80.708	ENSPMGG00000002841	srrt	95	80.702	Periophthalmus_magnuspinnatus
ENSSMAG00000015342	srrt	96	65.957	ENSPEMG00000010834	Srrt	95	66.350	Peromyscus_maniculatus_bairdii
ENSSMAG00000015342	srrt	96	55.423	ENSPMAG00000009614	-	95	53.737	Petromyzon_marinus
ENSSMAG00000015342	srrt	96	63.837	ENSPCIG00000000816	SRRT	95	64.094	Phascolarctos_cinereus
ENSSMAG00000015342	srrt	95	91.685	ENSPFOG00000005704	srrt	95	88.186	Poecilia_formosa
ENSSMAG00000015342	srrt	92	56.066	ENSPFOG00000016554	-	94	56.999	Poecilia_formosa
ENSSMAG00000015342	srrt	92	55.754	ENSPLAG00000004526	-	94	56.692	Poecilia_latipinna
ENSSMAG00000015342	srrt	95	85.832	ENSPLAG00000021992	srrt	95	86.305	Poecilia_latipinna
ENSSMAG00000015342	srrt	88	55.601	ENSPMEG00000001520	-	92	56.653	Poecilia_mexicana
ENSSMAG00000015342	srrt	95	91.247	ENSPMEG00000001182	srrt	95	87.947	Poecilia_mexicana
ENSSMAG00000015342	srrt	95	87.828	ENSPREG00000022308	srrt	95	87.947	Poecilia_reticulata
ENSSMAG00000015342	srrt	96	55.334	ENSPPYG00000017432	SRRT	95	55.713	Pongo_abelii
ENSSMAG00000015342	srrt	54	73.150	ENSPCAG00000001621	SRRT	95	62.750	Procavia_capensis
ENSSMAG00000015342	srrt	96	58.691	ENSPCOG00000025751	SRRT	95	64.713	Propithecus_coquereli
ENSSMAG00000015342	srrt	69	67.097	ENSPVAG00000000834	SRRT	100	57.163	Pteropus_vampyrus
ENSSMAG00000015342	srrt	93	92.967	ENSPNYG00000018710	srrt	95	89.606	Pundamilia_nyererei
ENSSMAG00000015342	srrt	90	89.241	ENSPNAG00000010629	srrt	94	61.047	Pygocentrus_nattereri
ENSSMAG00000015342	srrt	54	65.939	ENSRNOG00000048277	AABR07035787.1	92	65.066	Rattus_norvegicus
ENSSMAG00000015342	srrt	87	73.573	ENSRBIG00000035718	SRRT	97	64.079	Rhinopithecus_bieti
ENSSMAG00000015342	srrt	87	73.573	ENSRROG00000030622	SRRT	98	64.079	Rhinopithecus_roxellana
ENSSMAG00000015342	srrt	54	75.054	ENSSBOG00000033570	SRRT	96	65.141	Saimiri_boliviensis_boliviensis
ENSSMAG00000015342	srrt	72	60.709	ENSSHAG00000007349	-	99	61.325	Sarcophilus_harrisii
ENSSMAG00000015342	srrt	86	85.872	ENSSFOG00015017293	srrt	95	77.594	Scleropages_formosus
ENSSMAG00000015342	srrt	93	96.053	ENSSDUG00000012049	srrt	95	89.808	Seriola_dumerili
ENSSMAG00000015342	srrt	55	56.184	ENSSDUG00000002051	-	93	56.356	Seriola_dumerili
ENSSMAG00000015342	srrt	95	89.737	ENSSLDG00000017477	srrt	95	89.737	Seriola_lalandi_dorsalis
ENSSMAG00000015342	srrt	93	95.415	ENSSPAG00000005665	srrt	94	90.855	Stegastes_partitus
ENSSMAG00000015342	srrt	54	58.478	ENSSPAG00000018943	-	93	59.436	Stegastes_partitus
ENSSMAG00000015342	srrt	52	73.529	ENSSSCG00000024789	SRRT	99	61.859	Sus_scrofa
ENSSMAG00000015342	srrt	95	89.394	ENSTRUG00000016075	srrt	95	84.698	Takifugu_rubripes
ENSSMAG00000015342	srrt	90	53.865	ENSTRUG00000000023	-	93	55.584	Takifugu_rubripes
ENSSMAG00000015342	srrt	74	75.449	ENSTNIG00000011779	srrt	100	77.027	Tetraodon_nigroviridis
ENSSMAG00000015342	srrt	93	53.912	ENSTNIG00000003111	-	53	65.727	Tetraodon_nigroviridis
ENSSMAG00000015342	srrt	62	77.684	ENSTBEG00000005212	SRRT	58	77.095	Tupaia_belangeri
ENSSMAG00000015342	srrt	54	74.839	ENSTTRG00000011104	SRRT	95	64.377	Tursiops_truncatus
ENSSMAG00000015342	srrt	52	75.054	ENSUAMG00000027997	SRRT	98	64.377	Ursus_americanus
ENSSMAG00000015342	srrt	52	75.054	ENSUMAG00000011295	SRRT	95	64.439	Ursus_maritimus
ENSSMAG00000015342	srrt	96	64.651	ENSVVUG00000023572	SRRT	95	64.261	Vulpes_vulpes
ENSSMAG00000015342	srrt	76	76.966	ENSXETG00000025124	srrt	95	55.217	Xenopus_tropicalis
ENSSMAG00000015342	srrt	56	51.702	ENSXCOG00000013105	-	91	53.509	Xiphophorus_couchianus
ENSSMAG00000015342	srrt	92	55.203	ENSXMAG00000002090	-	94	56.981	Xiphophorus_maculatus
ENSSMAG00000015342	srrt	98	87.995	ENSXMAG00000007627	srrt	95	87.694	Xiphophorus_maculatus