EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000015379 (Gene tree)
Gene ID: -
Gene Symbol: prpf38a
Alias: fa04h11|fc83e08|wu:fa04h11|wu:fc83e08|zgc:92059
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 4641 bases
Position: chr12:430746-435386
Accession: ZDB-GENE-040801-225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000025135	PRP38	PF03371.15	6.3e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000025436	-	1496	-	ENSSMAP00000025135	308 (aa)	-	A0A2U9C1F0

Gene Model

Click here to download ENSSMAG00000015379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000015379's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000015379	prpf38a	75	87.879	ENSG00000134748	PRPF38A	71	88.688	Homo_sapiens
ENSSMAG00000015379	prpf38a	95	95.918	ENSAPOG00000011652	prpf38a	72	96.380	Acanthochromis_polyacanthus
ENSSMAG00000015379	prpf38a	75	87.879	ENSAMEG00000009319	PRPF38A	71	88.688	Ailuropoda_melanoleuca
ENSSMAG00000015379	prpf38a	72	91.892	ENSACIG00000012292	prpf38a	73	91.892	Amphilophus_citrinellus
ENSSMAG00000015379	prpf38a	95	95.918	ENSAOCG00000018004	prpf38a	72	96.380	Amphiprion_ocellaris
ENSSMAG00000015379	prpf38a	95	95.918	ENSAPEG00000021414	prpf38a	72	96.380	Amphiprion_percula
ENSSMAG00000015379	prpf38a	72	93.213	ENSATEG00000004608	prpf38a	72	93.213	Anabas_testudineus
ENSSMAG00000015379	prpf38a	54	83.133	ENSAPLG00000005827	PRPF38A	63	83.974	Anas_platyrhynchos
ENSSMAG00000015379	prpf38a	75	87.879	ENSACAG00000008249	PRPF38A	71	88.688	Anolis_carolinensis
ENSSMAG00000015379	prpf38a	99	58.786	ENSANAG00000029204	-	70	55.556	Aotus_nancymaae
ENSSMAG00000015379	prpf38a	75	87.879	ENSANAG00000027839	PRPF38A	71	88.688	Aotus_nancymaae
ENSSMAG00000015379	prpf38a	72	94.570	ENSACLG00000021595	prpf38a	74	94.570	Astatotilapia_calliptera
ENSSMAG00000015379	prpf38a	99	83.601	ENSAMXG00000029274	prpf38a	71	94.118	Astyanax_mexicanus
ENSSMAG00000015379	prpf38a	83	84.556	ENSBTAG00000002720	PRPF38A	75	88.688	Bos_taurus
ENSSMAG00000015379	prpf38a	63	64.103	WBGene00008380	prp-38	68	60.731	Caenorhabditis_elegans
ENSSMAG00000015379	prpf38a	83	84.170	ENSCJAG00000021594	PRPF38A	74	88.688	Callithrix_jacchus
ENSSMAG00000015379	prpf38a	75	87.879	ENSCAFG00000003740	PRPF38A	71	88.688	Canis_familiaris
ENSSMAG00000015379	prpf38a	75	87.879	ENSCAFG00020010939	PRPF38A	71	88.688	Canis_lupus_dingo
ENSSMAG00000015379	prpf38a	75	87.879	ENSCHIG00000024730	PRPF38A	71	88.688	Capra_hircus
ENSSMAG00000015379	prpf38a	75	87.879	ENSTSYG00000009868	-	71	88.688	Carlito_syrichta
ENSSMAG00000015379	prpf38a	61	84.574	ENSTSYG00000031994	-	63	85.393	Carlito_syrichta
ENSSMAG00000015379	prpf38a	99	82.848	ENSCPOG00000005079	PRPF38A	71	88.688	Cavia_porcellus
ENSSMAG00000015379	prpf38a	75	87.879	ENSCCAG00000026502	PRPF38A	71	88.688	Cebus_capucinus
ENSSMAG00000015379	prpf38a	100	53.548	ENSCATG00000044190	-	57	55.851	Cercocebus_atys
ENSSMAG00000015379	prpf38a	75	87.879	ENSCATG00000032296	PRPF38A	71	88.688	Cercocebus_atys
ENSSMAG00000015379	prpf38a	75	87.879	ENSCLAG00000005816	PRPF38A	71	88.688	Chinchilla_lanigera
ENSSMAG00000015379	prpf38a	75	87.446	ENSCPBG00000014791	PRPF38A	71	88.235	Chrysemys_picta_bellii
ENSSMAG00000015379	prpf38a	75	67.532	ENSCSAVG00000009580	-	71	69.585	Ciona_savignyi
ENSSMAG00000015379	prpf38a	75	87.879	ENSCANG00000032608	PRPF38A	74	88.688	Colobus_angolensis_palliatus
ENSSMAG00000015379	prpf38a	85	71.264	ENSCGRG00001002557	-	74	74.661	Cricetulus_griseus_chok1gshd
ENSSMAG00000015379	prpf38a	75	87.879	ENSCGRG00001018502	-	71	88.688	Cricetulus_griseus_chok1gshd
ENSSMAG00000015379	prpf38a	75	87.879	ENSCGRG00000014868	Prpf38a	71	88.688	Cricetulus_griseus_crigri
ENSSMAG00000015379	prpf38a	72	92.760	ENSCSEG00000001269	prpf38a	76	92.760	Cynoglossus_semilaevis
ENSSMAG00000015379	prpf38a	99	96.091	ENSCVAG00000012305	prpf38a	99	96.091	Cyprinodon_variegatus
ENSSMAG00000015379	prpf38a	99	83.601	ENSDARG00000039213	prpf38a	71	93.665	Danio_rerio
ENSSMAG00000015379	prpf38a	75	87.879	ENSDNOG00000042326	PRPF38A	72	88.688	Dasypus_novemcinctus
ENSSMAG00000015379	prpf38a	84	98.958	ENSDORG00000023857	-	64	98.958	Dipodomys_ordii
ENSSMAG00000015379	prpf38a	85	75.285	ENSDORG00000025371	-	75	80.734	Dipodomys_ordii
ENSSMAG00000015379	prpf38a	85	75.285	ENSDORG00000023691	-	75	80.734	Dipodomys_ordii
ENSSMAG00000015379	prpf38a	68	70.142	FBgn0050342	Prp38	57	74.468	Drosophila_melanogaster
ENSSMAG00000015379	prpf38a	77	80.335	ENSEBUG00000012588	prpf38a	71	79.821	Eptatretus_burgeri
ENSSMAG00000015379	prpf38a	75	87.879	ENSEASG00005014427	PRPF38A	71	88.688	Equus_asinus_asinus
ENSSMAG00000015379	prpf38a	75	87.879	ENSECAG00000022628	PRPF38A	71	88.688	Equus_caballus
ENSSMAG00000015379	prpf38a	72	95.023	ENSELUG00000021094	prpf38a	75	95.023	Esox_lucius
ENSSMAG00000015379	prpf38a	75	87.879	ENSFCAG00000002518	PRPF38A	71	88.688	Felis_catus
ENSSMAG00000015379	prpf38a	99	75.000	ENSFALG00000003612	-	73	82.110	Ficedula_albicollis
ENSSMAG00000015379	prpf38a	62	83.684	ENSFALG00000005598	-	66	84.444	Ficedula_albicollis
ENSSMAG00000015379	prpf38a	99	82.524	ENSFDAG00000011287	PRPF38A	72	88.688	Fukomys_damarensis
ENSSMAG00000015379	prpf38a	91	82.796	ENSFHEG00000014317	prpf38a	75	94.570	Fundulus_heteroclitus
ENSSMAG00000015379	prpf38a	54	96.988	ENSGMOG00000011384	prpf38a	54	96.988	Gadus_morhua
ENSSMAG00000015379	prpf38a	75	86.580	ENSGALG00000010627	PRPF38A	71	87.330	Gallus_gallus
ENSSMAG00000015379	prpf38a	72	95.023	ENSGAFG00000012422	prpf38a	72	95.023	Gambusia_affinis
ENSSMAG00000015379	prpf38a	72	93.722	ENSGACG00000005423	prpf38a	72	93.722	Gasterosteus_aculeatus
ENSSMAG00000015379	prpf38a	50	93.548	ENSGACG00000000182	-	91	93.548	Gasterosteus_aculeatus
ENSSMAG00000015379	prpf38a	75	87.446	ENSGAGG00000020547	PRPF38A	71	88.235	Gopherus_agassizii
ENSSMAG00000015379	prpf38a	75	87.879	ENSGGOG00000003940	PRPF38A	71	88.688	Gorilla_gorilla
ENSSMAG00000015379	prpf38a	61	95.767	ENSHBUG00000020572	prpf38a	80	95.745	Haplochromis_burtoni
ENSSMAG00000015379	prpf38a	99	73.463	ENSHGLG00000007918	-	71	76.018	Heterocephalus_glaber_female
ENSSMAG00000015379	prpf38a	75	87.879	ENSHGLG00000000475	PRPF38A	71	88.688	Heterocephalus_glaber_female
ENSSMAG00000015379	prpf38a	99	73.463	ENSHGLG00100003928	-	71	76.018	Heterocephalus_glaber_male
ENSSMAG00000015379	prpf38a	75	87.879	ENSHGLG00100008935	PRPF38A	71	88.688	Heterocephalus_glaber_male
ENSSMAG00000015379	prpf38a	59	92.308	ENSHCOG00000020781	prpf38a	59	92.553	Hippocampus_comes
ENSSMAG00000015379	prpf38a	91	79.298	ENSIPUG00000005757	prpf38a	71	91.892	Ictalurus_punctatus
ENSSMAG00000015379	prpf38a	75	87.879	ENSSTOG00000015610	PRPF38A	71	88.688	Ictidomys_tridecemlineatus
ENSSMAG00000015379	prpf38a	75	87.879	ENSJJAG00000015811	Prpf38a	71	88.688	Jaculus_jaculus
ENSSMAG00000015379	prpf38a	72	95.475	ENSKMAG00000006588	prpf38a	72	95.475	Kryptolebias_marmoratus
ENSSMAG00000015379	prpf38a	95	95.238	ENSLBEG00000020585	prpf38a	72	95.475	Labrus_bergylta
ENSSMAG00000015379	prpf38a	73	86.222	ENSLACG00000011495	PRPF38A	71	86.425	Latimeria_chalumnae
ENSSMAG00000015379	prpf38a	99	91.883	ENSLOCG00000006262	prpf38a	72	89.640	Lepisosteus_oculatus
ENSSMAG00000015379	prpf38a	75	87.879	ENSLAFG00000025862	PRPF38A	71	88.688	Loxodonta_africana
ENSSMAG00000015379	prpf38a	83	84.170	ENSMFAG00000039449	PRPF38A	74	88.688	Macaca_fascicularis
ENSSMAG00000015379	prpf38a	62	85.263	ENSMMUG00000014333	PRPF38A	65	85.635	Macaca_mulatta
ENSSMAG00000015379	prpf38a	100	53.871	ENSMNEG00000040242	-	65	57.971	Macaca_nemestrina
ENSSMAG00000015379	prpf38a	75	87.879	ENSMNEG00000031221	PRPF38A	71	88.688	Macaca_nemestrina
ENSSMAG00000015379	prpf38a	75	87.879	ENSMLEG00000041105	PRPF38A	71	88.688	Mandrillus_leucophaeus
ENSSMAG00000015379	prpf38a	99	96.417	ENSMAMG00000015431	prpf38a	99	96.417	Mastacembelus_armatus
ENSSMAG00000015379	prpf38a	72	94.570	ENSMZEG00005017838	prpf38a	72	94.570	Maylandia_zebra
ENSSMAG00000015379	prpf38a	75	86.580	ENSMGAG00000011176	PRPF38A	74	87.330	Meleagris_gallopavo
ENSSMAG00000015379	prpf38a	85	83.333	ENSMAUG00000018029	-	84	84.163	Mesocricetus_auratus
ENSSMAG00000015379	prpf38a	75	87.879	ENSMICG00000014193	PRPF38A	71	88.688	Microcebus_murinus
ENSSMAG00000015379	prpf38a	75	87.879	ENSMOCG00000013080	Prpf38a	71	88.688	Microtus_ochrogaster
ENSSMAG00000015379	prpf38a	100	88.387	ENSMMOG00000016972	prpf38a	85	89.695	Mola_mola
ENSSMAG00000015379	prpf38a	75	84.914	ENSMODG00000000644	PRPF38A	71	85.586	Monodelphis_domestica
ENSSMAG00000015379	prpf38a	99	97.394	ENSMALG00000019363	prpf38a	97	97.394	Monopterus_albus
ENSSMAG00000015379	prpf38a	75	86.580	MGP_CAROLIEiJ_G0026269	Prpf38a	71	87.330	Mus_caroli
ENSSMAG00000015379	prpf38a	75	86.580	ENSMUSG00000063800	Prpf38a	71	87.330	Mus_musculus
ENSSMAG00000015379	prpf38a	75	86.580	MGP_PahariEiJ_G0028602	Prpf38a	71	87.330	Mus_pahari
ENSSMAG00000015379	prpf38a	75	86.580	MGP_SPRETEiJ_G0027238	Prpf38a	93	90.957	Mus_spretus
ENSSMAG00000015379	prpf38a	75	87.879	ENSMPUG00000006896	PRPF38A	71	88.688	Mustela_putorius_furo
ENSSMAG00000015379	prpf38a	99	83.172	ENSNGAG00000011884	Prpf38a	72	88.688	Nannospalax_galili
ENSSMAG00000015379	prpf38a	72	93.243	ENSNBRG00000004013	prpf38a	71	93.243	Neolamprologus_brichardi
ENSSMAG00000015379	prpf38a	93	55.670	ENSNLEG00000033398	-	60	50.685	Nomascus_leucogenys
ENSSMAG00000015379	prpf38a	97	62.829	ENSNLEG00000012592	-	67	58.824	Nomascus_leucogenys
ENSSMAG00000015379	prpf38a	68	87.019	ENSNLEG00000017999	PRPF38A	63	87.879	Nomascus_leucogenys
ENSSMAG00000015379	prpf38a	75	83.983	ENSMEUG00000003860	PRPF38A	71	84.615	Notamacropus_eugenii
ENSSMAG00000015379	prpf38a	74	88.158	ENSOPRG00000008985	PRPF38A	92	88.688	Ochotona_princeps
ENSSMAG00000015379	prpf38a	75	87.879	ENSODEG00000005869	PRPF38A	71	88.688	Octodon_degus
ENSSMAG00000015379	prpf38a	72	94.118	ENSONIG00000007816	prpf38a	72	94.118	Oreochromis_niloticus
ENSSMAG00000015379	prpf38a	75	45.494	ENSOANG00000009541	-	71	44.196	Ornithorhynchus_anatinus
ENSSMAG00000015379	prpf38a	75	87.879	ENSOCUG00000000963	PRPF38A	71	88.688	Oryctolagus_cuniculus
ENSSMAG00000015379	prpf38a	96	94.613	ENSORLG00000013485	prpf38a	79	95.023	Oryzias_latipes
ENSSMAG00000015379	prpf38a	96	94.613	ENSORLG00020002130	prpf38a	79	95.023	Oryzias_latipes_hni
ENSSMAG00000015379	prpf38a	96	94.276	ENSORLG00015021393	prpf38a	75	94.570	Oryzias_latipes_hsok
ENSSMAG00000015379	prpf38a	95	93.878	ENSOMEG00000016333	prpf38a	72	94.118	Oryzias_melastigma
ENSSMAG00000015379	prpf38a	75	87.879	ENSOGAG00000005423	PRPF38A	71	88.688	Otolemur_garnettii
ENSSMAG00000015379	prpf38a	75	87.879	ENSOARG00000005373	PRPF38A	71	88.688	Ovis_aries
ENSSMAG00000015379	prpf38a	75	87.879	ENSPPAG00000030905	PRPF38A	71	88.688	Pan_paniscus
ENSSMAG00000015379	prpf38a	93	68.385	ENSPPAG00000033867	-	68	69.231	Pan_paniscus
ENSSMAG00000015379	prpf38a	75	87.879	ENSPPRG00000013268	PRPF38A	71	88.688	Panthera_pardus
ENSSMAG00000015379	prpf38a	75	87.879	ENSPTIG00000015419	PRPF38A	71	88.688	Panthera_tigris_altaica
ENSSMAG00000015379	prpf38a	83	82.625	ENSPTRG00000000739	PRPF38A	74	88.688	Pan_troglodytes
ENSSMAG00000015379	prpf38a	75	87.879	ENSPANG00000015483	PRPF38A	71	88.688	Papio_anubis
ENSSMAG00000015379	prpf38a	99	94.137	ENSPKIG00000011439	prpf38a	72	93.665	Paramormyrops_kingsleyae
ENSSMAG00000015379	prpf38a	75	86.147	ENSPSIG00000017487	PRPF38A	71	86.878	Pelodiscus_sinensis
ENSSMAG00000015379	prpf38a	99	79.553	ENSPEMG00000011212	-	70	81.166	Peromyscus_maniculatus_bairdii
ENSSMAG00000015379	prpf38a	75	87.879	ENSPEMG00000023277	-	71	88.688	Peromyscus_maniculatus_bairdii
ENSSMAG00000015379	prpf38a	75	84.483	ENSPCIG00000022369	-	71	85.135	Phascolarctos_cinereus
ENSSMAG00000015379	prpf38a	95	87.205	ENSPFOG00000004248	prpf38a	72	95.023	Poecilia_formosa
ENSSMAG00000015379	prpf38a	92	82.007	ENSPLAG00000010328	prpf38a	72	95.023	Poecilia_latipinna
ENSSMAG00000015379	prpf38a	92	82.007	ENSPMEG00000011804	prpf38a	72	95.023	Poecilia_mexicana
ENSSMAG00000015379	prpf38a	94	80.678	ENSPREG00000002835	prpf38a	58	96.277	Poecilia_reticulata
ENSSMAG00000015379	prpf38a	75	77.119	ENSPPYG00000001348	PRPF38A	71	77.434	Pongo_abelii
ENSSMAG00000015379	prpf38a	75	87.446	ENSPCAG00000013328	PRPF38A	71	88.235	Procavia_capensis
ENSSMAG00000015379	prpf38a	99	66.775	ENSPCOG00000020709	-	73	71.493	Propithecus_coquereli
ENSSMAG00000015379	prpf38a	75	87.879	ENSPCOG00000016387	-	71	88.688	Propithecus_coquereli
ENSSMAG00000015379	prpf38a	75	87.879	ENSPVAG00000009803	PRPF38A	71	88.688	Pteropus_vampyrus
ENSSMAG00000015379	prpf38a	72	94.570	ENSPNYG00000005571	prpf38a	72	94.570	Pundamilia_nyererei
ENSSMAG00000015379	prpf38a	72	93.213	ENSPNAG00000010399	prpf38a	71	93.213	Pygocentrus_nattereri
ENSSMAG00000015379	prpf38a	75	87.446	ENSRNOG00000009451	Prpf38a	71	88.235	Rattus_norvegicus
ENSSMAG00000015379	prpf38a	75	87.879	ENSRBIG00000036442	PRPF38A	74	88.688	Rhinopithecus_bieti
ENSSMAG00000015379	prpf38a	100	69.677	ENSRROG00000040003	-	72	71.946	Rhinopithecus_roxellana
ENSSMAG00000015379	prpf38a	75	87.879	ENSRROG00000032788	PRPF38A	71	88.688	Rhinopithecus_roxellana
ENSSMAG00000015379	prpf38a	75	87.879	ENSSBOG00000019515	PRPF38A	71	88.688	Saimiri_boliviensis_boliviensis
ENSSMAG00000015379	prpf38a	61	81.579	ENSSHAG00000006906	-	66	82.222	Sarcophilus_harrisii
ENSSMAG00000015379	prpf38a	96	66.890	ENSSHAG00000006029	-	74	77.376	Sarcophilus_harrisii
ENSSMAG00000015379	prpf38a	99	91.883	ENSSFOG00015013572	prpf38a	72	87.387	Scleropages_formosus
ENSSMAG00000015379	prpf38a	99	97.720	ENSSDUG00000001324	prpf38a	99	97.720	Seriola_dumerili
ENSSMAG00000015379	prpf38a	99	97.720	ENSSLDG00000014803	prpf38a	99	97.720	Seriola_lalandi_dorsalis
ENSSMAG00000015379	prpf38a	75	64.502	ENSSARG00000014458	PRPF38A	71	64.253	Sorex_araneus
ENSSMAG00000015379	prpf38a	75	86.580	ENSSPUG00000013259	PRPF38A	71	87.330	Sphenodon_punctatus
ENSSMAG00000015379	prpf38a	72	77.376	ENSSPAG00000010449	prpf38a	68	77.376	Stegastes_partitus
ENSSMAG00000015379	prpf38a	75	87.879	ENSSSCG00000028288	PRPF38A	71	88.688	Sus_scrofa
ENSSMAG00000015379	prpf38a	75	81.385	ENSTGUG00000008995	PRPF38A	71	81.900	Taeniopygia_guttata
ENSSMAG00000015379	prpf38a	72	96.380	ENSTRUG00000003374	prpf38a	68	96.380	Takifugu_rubripes
ENSSMAG00000015379	prpf38a	95	94.932	ENSTNIG00000005533	prpf38a	95	94.932	Tetraodon_nigroviridis
ENSSMAG00000015379	prpf38a	75	87.879	ENSTBEG00000000725	PRPF38A	71	88.688	Tupaia_belangeri
ENSSMAG00000015379	prpf38a	75	87.879	ENSTTRG00000016139	PRPF38A	71	88.688	Tursiops_truncatus
ENSSMAG00000015379	prpf38a	75	87.879	ENSUAMG00000000625	PRPF38A	71	88.688	Ursus_americanus
ENSSMAG00000015379	prpf38a	75	87.879	ENSUMAG00000022674	PRPF38A	71	88.688	Ursus_maritimus
ENSSMAG00000015379	prpf38a	75	87.446	ENSVPAG00000000907	PRPF38A	71	88.235	Vicugna_pacos
ENSSMAG00000015379	prpf38a	75	87.879	ENSVVUG00000004475	PRPF38A	71	88.688	Vulpes_vulpes
ENSSMAG00000015379	prpf38a	99	79.808	ENSXETG00000008060	prpf38a	71	86.425	Xenopus_tropicalis
ENSSMAG00000015379	prpf38a	73	92.920	ENSXCOG00000007393	prpf38a	75	92.920	Xiphophorus_couchianus
ENSSMAG00000015379	prpf38a	72	95.023	ENSXMAG00000026143	prpf38a	72	95.023	Xiphophorus_maculatus