EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSMAG00000015432 (Gene tree)
Gene ID
-
Gene Symbol
trnt1
Alias
zgc:86645
Full Name
tRNA nucleotidyl transferase%2C CCA-adding%2C 1
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Minus strand
Length
8507 bases
Position
chr6:21300060-21308566
Accession
ZDB-GENE-040625-176
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000025236PolyA_polPF01743.201.4e-3311
ENSSMAP00000025254PolyA_polPF01743.203.6e-3311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000025536-5646-ENSSMAP00000025236446 (aa)--
ENSSMAT00000025555-3499-ENSSMAP00000025254436 (aa)--
Gene Model
Click here to download ENSSMAG00000015432's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000015432's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000015432trnt19766.824ENSG00000072756TRNT19866.824Homo_sapiens
ENSSMAG00000015432trnt19884.075ENSAPOG00000013687trnt110084.075Acanthochromis_polyacanthus
ENSSMAG00000015432trnt19766.511ENSAMEG00000014520TRNT19866.511Ailuropoda_melanoleuca
ENSSMAG00000015432trnt19886.885ENSACIG00000021706trnt110086.885Amphilophus_citrinellus
ENSSMAG00000015432trnt19886.183ENSAOCG00000024612trnt110086.183Amphiprion_ocellaris
ENSSMAG00000015432trnt19579.087ENSAPEG00000022627trnt19779.087Amphiprion_percula
ENSSMAG00000015432trnt19287.841ENSATEG00000008928trnt19987.841Anabas_testudineus
ENSSMAG00000015432trnt18868.930ENSAPLG00000004258TRNT19568.930Anas_platyrhynchos
ENSSMAG00000015432trnt19964.598ENSACAG00000005657TRNT19964.598Anolis_carolinensis
ENSSMAG00000015432trnt19567.711ENSANAG00000024802TRNT19667.711Aotus_nancymaae
ENSSMAG00000015432trnt19885.915ENSACLG00000022227trnt19985.915Astatotilapia_calliptera
ENSSMAG00000015432trnt19777.103ENSAMXG00000003960trnt19977.103Astyanax_mexicanus
ENSSMAG00000015432trnt19765.882ENSBTAG00000019534TRNT19865.882Bos_taurus
ENSSMAG00000015432trnt19343.373WBGene00010089hpo-319443.373Caenorhabditis_elegans
ENSSMAG00000015432trnt19567.952ENSCJAG00000015466TRNT19667.952Callithrix_jacchus
ENSSMAG00000015432trnt19567.866ENSCAFG00000005985TRNT19667.866Canis_familiaris
ENSSMAG00000015432trnt19567.866ENSCAFG00020014746TRNT19667.866Canis_lupus_dingo
ENSSMAG00000015432trnt19767.059ENSCHIG00000007030TRNT19767.059Capra_hircus
ENSSMAG00000015432trnt19767.059ENSTSYG00000013390TRNT19867.059Carlito_syrichta
ENSSMAG00000015432trnt18655.053ENSCAPG00000006891TRNT19955.053Cavia_aperea
ENSSMAG00000015432trnt19766.118ENSCPOG00000007849TRNT19866.118Cavia_porcellus
ENSSMAG00000015432trnt19467.150ENSCCAG00000002919TRNT19868.448Cebus_capucinus
ENSSMAG00000015432trnt19767.294ENSCATG00000031985TRNT19767.294Cercocebus_atys
ENSSMAG00000015432trnt19767.059ENSCLAG00000005186TRNT19275.000Chinchilla_lanigera
ENSSMAG00000015432trnt19767.294ENSCSAG00000011052TRNT19867.294Chlorocebus_sabaeus
ENSSMAG00000015432trnt18274.359ENSCHOG00000005712TRNT18374.359Choloepus_hoffmanni
ENSSMAG00000015432trnt19469.118ENSCPBG00000017636TRNT19369.118Chrysemys_picta_bellii
ENSSMAG00000015432trnt19241.728ENSCING00000007069-9941.728Ciona_intestinalis
ENSSMAG00000015432trnt19540.909ENSCSAVG00000007494-9840.909Ciona_savignyi
ENSSMAG00000015432trnt19767.529ENSCANG00000039030TRNT19867.529Colobus_angolensis_palliatus
ENSSMAG00000015432trnt19766.588ENSCGRG00001009998Trnt19866.588Cricetulus_griseus_chok1gshd
ENSSMAG00000015432trnt19766.588ENSCGRG00000013410Trnt19474.874Cricetulus_griseus_crigri
ENSSMAG00000015432trnt19884.742ENSCSEG00000008157trnt19984.742Cynoglossus_semilaevis
ENSSMAG00000015432trnt19883.841ENSCVAG00000019770trnt110083.841Cyprinodon_variegatus
ENSSMAG00000015432trnt19778.638ENSDARG00000075297trnt19978.638Danio_rerio
ENSSMAG00000015432trnt19868.065ENSDNOG00000008837TRNT19968.065Dasypus_novemcinctus
ENSSMAG00000015432trnt19768.075ENSDORG00000014035Trnt19868.075Dipodomys_ordii
ENSSMAG00000015432trnt19248.768FBgn0037369CG21008348.768Drosophila_melanogaster
ENSSMAG00000015432trnt15773.494ENSETEG00000018177TRNT110073.494Echinops_telfairi
ENSSMAG00000015432trnt19760.235ENSEBUG00000012779-9960.235Eptatretus_burgeri
ENSSMAG00000015432trnt19768.000ENSEASG00005003577TRNT19868.000Equus_asinus_asinus
ENSSMAG00000015432trnt19768.235ENSECAG00000014420TRNT19868.235Equus_caballus
ENSSMAG00000015432trnt19766.588ENSEEUG00000009567TRNT19766.588Erinaceus_europaeus
ENSSMAG00000015432trnt19780.796ENSELUG00000003802trnt19980.796Esox_lucius
ENSSMAG00000015432trnt19767.059ENSFCAG00000026805TRNT19767.059Felis_catus
ENSSMAG00000015432trnt18869.191ENSFALG00000013539TRNT19969.191Ficedula_albicollis
ENSSMAG00000015432trnt19767.059ENSFDAG00000018412TRNT19867.059Fukomys_damarensis
ENSSMAG00000015432trnt19885.246ENSFHEG00000019294trnt110085.246Fundulus_heteroclitus
ENSSMAG00000015432trnt19780.986ENSGMOG00000007460trnt110080.986Gadus_morhua
ENSSMAG00000015432trnt19863.488ENSGALG00000017368TRNT19963.488Gallus_gallus
ENSSMAG00000015432trnt19882.864ENSGAFG00000008647trnt19982.864Gambusia_affinis
ENSSMAG00000015432trnt19884.507ENSGACG00000011903trnt19984.507Gasterosteus_aculeatus
ENSSMAG00000015432trnt19569.324ENSGAGG00000020942TRNT19469.324Gopherus_agassizii
ENSSMAG00000015432trnt19767.059ENSGGOG00000015286TRNT19867.059Gorilla_gorilla
ENSSMAG00000015432trnt19886.150ENSHBUG00000002797trnt19986.150Haplochromis_burtoni
ENSSMAG00000015432trnt19767.059ENSHGLG00000003649TRNT19867.059Heterocephalus_glaber_female
ENSSMAG00000015432trnt19761.972ENSHGLG00000000221-9861.972Heterocephalus_glaber_female
ENSSMAG00000015432trnt19765.882ENSHGLG00100016421TRNT19865.882Heterocephalus_glaber_male
ENSSMAG00000015432trnt19876.347ENSHCOG00000010618trnt110076.347Hippocampus_comes
ENSSMAG00000015432trnt19776.402ENSIPUG00000000971trnt19976.402Ictalurus_punctatus
ENSSMAG00000015432trnt19567.874ENSSTOG00000000150TRNT19077.957Ictidomys_tridecemlineatus
ENSSMAG00000015432trnt19866.667ENSJJAG00000018561Trnt19866.667Jaculus_jaculus
ENSSMAG00000015432trnt19882.864ENSKMAG00000011307trnt19982.864Kryptolebias_marmoratus
ENSSMAG00000015432trnt19479.756ENSLBEG00000019457trnt19779.756Labrus_bergylta
ENSSMAG00000015432trnt19469.830ENSLACG00000013227TRNT19569.830Latimeria_chalumnae
ENSSMAG00000015432trnt19873.953ENSLOCG00000011105trnt19873.953Lepisosteus_oculatus
ENSSMAG00000015432trnt19767.294ENSLAFG00000023191TRNT19867.294Loxodonta_africana
ENSSMAG00000015432trnt19767.294ENSMFAG00000045113TRNT19767.294Macaca_fascicularis
ENSSMAG00000015432trnt19767.294ENSMMUG00000017983TRNT19767.294Macaca_mulatta
ENSSMAG00000015432trnt19767.294ENSMNEG00000037805TRNT19767.294Macaca_nemestrina
ENSSMAG00000015432trnt18869.895ENSMLEG00000033671TRNT19969.895Mandrillus_leucophaeus
ENSSMAG00000015432trnt19886.417ENSMAMG00000023401trnt110086.417Mastacembelus_armatus
ENSSMAG00000015432trnt19885.915ENSMZEG00005009141trnt19985.915Maylandia_zebra
ENSSMAG00000015432trnt17364.890ENSMGAG00000009971TRNT19964.890Meleagris_gallopavo
ENSSMAG00000015432trnt19766.353ENSMAUG00000020707Trnt19866.353Mesocricetus_auratus
ENSSMAG00000015432trnt19767.529ENSMICG00000016615TRNT19867.529Microcebus_murinus
ENSSMAG00000015432trnt19766.588ENSMOCG00000004539Trnt19866.588Microtus_ochrogaster
ENSSMAG00000015432trnt19885.211ENSMMOG00000010742trnt19985.211Mola_mola
ENSSMAG00000015432trnt19965.197ENSMODG00000004368TRNT19765.197Monodelphis_domestica
ENSSMAG00000015432trnt19883.372ENSMALG00000008376trnt19983.372Monopterus_albus
ENSSMAG00000015432trnt19766.824MGP_CAROLIEiJ_G0028698Trnt19672.414Mus_caroli
ENSSMAG00000015432trnt19766.588ENSMUSG00000013736Trnt19176.020Mus_musculus
ENSSMAG00000015432trnt19867.133MGP_PahariEiJ_G0022449Trnt19975.500Mus_pahari
ENSSMAG00000015432trnt19766.824MGP_SPRETEiJ_G0029726Trnt19176.020Mus_spretus
ENSSMAG00000015432trnt19567.229ENSMPUG00000017017TRNT19567.229Mustela_putorius_furo
ENSSMAG00000015432trnt18869.191ENSMLUG00000011864TRNT19969.191Myotis_lucifugus
ENSSMAG00000015432trnt19567.470ENSNGAG00000000537Trnt19667.470Nannospalax_galili
ENSSMAG00000015432trnt17986.705ENSNBRG00000023606trnt110086.744Neolamprologus_brichardi
ENSSMAG00000015432trnt19767.294ENSNLEG00000003226TRNT19867.294Nomascus_leucogenys
ENSSMAG00000015432trnt19964.733ENSMEUG00000004684TRNT19764.733Notamacropus_eugenii
ENSSMAG00000015432trnt18865.969ENSOPRG00000015067TRNT19965.969Ochotona_princeps
ENSSMAG00000015432trnt19767.294ENSODEG00000007597TRNT19867.294Octodon_degus
ENSSMAG00000015432trnt19986.111ENSONIG00000020273trnt19986.111Oreochromis_niloticus
ENSSMAG00000015432trnt19763.357ENSOANG00000007514TRNT19863.357Ornithorhynchus_anatinus
ENSSMAG00000015432trnt19367.980ENSOCUG00000008580TRNT19467.980Oryctolagus_cuniculus
ENSSMAG00000015432trnt19480.147ENSORLG00000003165trnt19680.147Oryzias_latipes
ENSSMAG00000015432trnt19480.392ENSORLG00020022060trnt19680.392Oryzias_latipes_hni
ENSSMAG00000015432trnt19480.392ENSORLG00015018915trnt19680.392Oryzias_latipes_hsok
ENSSMAG00000015432trnt19874.883ENSOMEG00000003331trnt19974.883Oryzias_melastigma
ENSSMAG00000015432trnt19767.059ENSOARG00000008631TRNT19767.059Ovis_aries
ENSSMAG00000015432trnt19766.824ENSPPAG00000043566TRNT19866.824Pan_paniscus
ENSSMAG00000015432trnt19767.059ENSPPRG00000001327TRNT19767.059Panthera_pardus
ENSSMAG00000015432trnt19767.059ENSPTIG00000011448TRNT19767.059Panthera_tigris_altaica
ENSSMAG00000015432trnt19766.824ENSPTRG00000014564TRNT19866.824Pan_troglodytes
ENSSMAG00000015432trnt19767.294ENSPANG00000025944TRNT19767.294Papio_anubis
ENSSMAG00000015432trnt19775.234ENSPKIG00000020015trnt19975.234Paramormyrops_kingsleyae
ENSSMAG00000015432trnt19169.620ENSPSIG00000017356TRNT19970.474Pelodiscus_sinensis
ENSSMAG00000015432trnt19880.841ENSPMGG00000008888trnt19980.841Periophthalmus_magnuspinnatus
ENSSMAG00000015432trnt19766.118ENSPEMG00000019845Trnt19866.118Peromyscus_maniculatus_bairdii
ENSSMAG00000015432trnt19766.430ENSPCIG00000030436TRNT19766.430Phascolarctos_cinereus
ENSSMAG00000015432trnt19783.452ENSPFOG00000006194trnt19983.452Poecilia_formosa
ENSSMAG00000015432trnt19783.452ENSPLAG00000015623trnt19985.608Poecilia_latipinna
ENSSMAG00000015432trnt19883.568ENSPMEG00000012216trnt19985.608Poecilia_mexicana
ENSSMAG00000015432trnt19882.864ENSPREG00000021470trnt19982.864Poecilia_reticulata
ENSSMAG00000015432trnt19767.059ENSPPYG00000013702TRNT19867.059Pongo_abelii
ENSSMAG00000015432trnt18869.895ENSPCAG00000001951TRNT19969.895Procavia_capensis
ENSSMAG00000015432trnt19767.294ENSPCOG00000022228TRNT19867.294Propithecus_coquereli
ENSSMAG00000015432trnt18868.848ENSPVAG00000008784TRNT19968.848Pteropus_vampyrus
ENSSMAG00000015432trnt19885.681ENSPNYG00000003120trnt19985.681Pundamilia_nyererei
ENSSMAG00000015432trnt19777.804ENSPNAG00000000565trnt19977.804Pygocentrus_nattereri
ENSSMAG00000015432trnt19767.294ENSRNOG00000006432Trnt19867.294Rattus_norvegicus
ENSSMAG00000015432trnt19766.353ENSRBIG00000042632TRNT19866.353Rhinopithecus_bieti
ENSSMAG00000015432trnt19767.294ENSRROG00000036866TRNT19867.294Rhinopithecus_roxellana
ENSSMAG00000015432trnt19567.952ENSSBOG00000021208TRNT19667.952Saimiri_boliviensis_boliviensis
ENSSMAG00000015432trnt19466.910ENSSHAG00000018861TRNT19566.910Sarcophilus_harrisii
ENSSMAG00000015432trnt19874.142ENSSFOG00015020844trnt19974.592Scleropages_formosus
ENSSMAG00000015432trnt19888.967ENSSDUG00000012320trnt110088.967Seriola_dumerili
ENSSMAG00000015432trnt19888.498ENSSLDG00000009325trnt110088.498Seriola_lalandi_dorsalis
ENSSMAG00000015432trnt15587.448ENSSLDG00000016463-9287.243Seriola_lalandi_dorsalis
ENSSMAG00000015432trnt18871.466ENSSPUG00000014153TRNT19971.466Sphenodon_punctatus
ENSSMAG00000015432trnt19885.012ENSSPAG00000021005trnt110085.012Stegastes_partitus
ENSSMAG00000015432trnt19767.529ENSSSCG00000011529TRNT19867.529Sus_scrofa
ENSSMAG00000015432trnt19367.822ENSTGUG00000010192TRNT19967.822Taeniopygia_guttata
ENSSMAG00000015432trnt19882.864ENSTRUG00000001088trnt19982.864Takifugu_rubripes
ENSSMAG00000015432trnt19981.481ENSTNIG00000007363trnt19981.481Tetraodon_nigroviridis
ENSSMAG00000015432trnt16058.846ENSTBEG00000006367TRNT18658.846Tupaia_belangeri
ENSSMAG00000015432trnt19766.588ENSTTRG00000007803TRNT19866.588Tursiops_truncatus
ENSSMAG00000015432trnt19766.824ENSUAMG00000022574TRNT19766.824Ursus_americanus
ENSSMAG00000015432trnt19766.824ENSUMAG00000024092TRNT19766.824Ursus_maritimus
ENSSMAG00000015432trnt19567.866ENSVVUG00000012810TRNT19667.866Vulpes_vulpes
ENSSMAG00000015432trnt19661.190ENSXETG00000025091trnt19962.687Xenopus_tropicalis
ENSSMAG00000015432trnt19883.099ENSXCOG00000010150trnt19983.099Xiphophorus_couchianus
ENSSMAG00000015432trnt19883.333ENSXMAG00000002227trnt19983.333Xiphophorus_maculatus

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