EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000015834 (Gene tree)
Gene ID: -
Gene Symbol: usb1
Alias: zgc:91896
Full Name: U6 snRNA biogenesis 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 4111 bases
Position: chr10:22433280-22437390
Accession: ZDB-GENE-040801-197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000025864	HVSL	PF09749.9	1e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000026178	-	888	-	ENSSMAP00000025864	295 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000015834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000015834's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000015834	usb1	83	50.202	ENSG00000103005	USB1	100	51.754	Homo_sapiens
ENSSMAG00000015834	usb1	100	68.814	ENSAPOG00000011942	usb1	100	68.475	Acanthochromis_polyacanthus
ENSSMAG00000015834	usb1	99	46.939	ENSAMEG00000017205	USB1	96	47.292	Ailuropoda_melanoleuca
ENSSMAG00000015834	usb1	81	76.050	ENSACIG00000012234	usb1	83	76.050	Amphilophus_citrinellus
ENSSMAG00000015834	usb1	99	71.284	ENSAOCG00000014831	usb1	99	71.284	Amphiprion_ocellaris
ENSSMAG00000015834	usb1	99	70.608	ENSAPEG00000000296	usb1	99	70.608	Amphiprion_percula
ENSSMAG00000015834	usb1	99	72.449	ENSATEG00000009348	usb1	99	72.727	Anabas_testudineus
ENSSMAG00000015834	usb1	80	52.720	ENSAPLG00000002756	USB1	99	52.720	Anas_platyrhynchos
ENSSMAG00000015834	usb1	80	49.791	ENSACAG00000015481	USB1	98	49.791	Anolis_carolinensis
ENSSMAG00000015834	usb1	99	46.128	ENSANAG00000035640	USB1	98	47.826	Aotus_nancymaae
ENSSMAG00000015834	usb1	100	68.013	ENSACLG00000020586	usb1	100	68.896	Astatotilapia_calliptera
ENSSMAG00000015834	usb1	80	60.504	ENSAMXG00000040146	usb1	74	60.504	Astyanax_mexicanus
ENSSMAG00000015834	usb1	99	47.619	ENSBTAG00000015758	USB1	98	48.029	Bos_taurus
ENSSMAG00000015834	usb1	99	47.138	ENSCJAG00000011733	USB1	98	48.913	Callithrix_jacchus
ENSSMAG00000015834	usb1	83	50.202	ENSCAFG00000008556	USB1	75	45.973	Canis_familiaris
ENSSMAG00000015834	usb1	99	46.416	ENSCAFG00020009263	USB1	97	47.810	Canis_lupus_dingo
ENSSMAG00000015834	usb1	99	47.619	ENSCHIG00000024290	USB1	98	48.913	Capra_hircus
ENSSMAG00000015834	usb1	83	49.393	ENSTSYG00000006997	USB1	98	46.763	Carlito_syrichta
ENSSMAG00000015834	usb1	83	41.224	ENSCAPG00000009057	USB1	99	41.224	Cavia_aperea
ENSSMAG00000015834	usb1	99	46.959	ENSCPOG00000014325	USB1	87	51.012	Cavia_porcellus
ENSSMAG00000015834	usb1	99	46.801	ENSCCAG00000022132	USB1	98	48.551	Cebus_capucinus
ENSSMAG00000015834	usb1	99	48.299	ENSCATG00000032174	USB1	98	49.275	Cercocebus_atys
ENSSMAG00000015834	usb1	63	51.337	ENSCLAG00000007363	USB1	87	52.695	Chinchilla_lanigera
ENSSMAG00000015834	usb1	99	47.619	ENSCSAG00000004783	USB1	98	48.913	Chlorocebus_sabaeus
ENSSMAG00000015834	usb1	80	54.852	ENSCPBG00000026943	USB1	98	50.000	Chrysemys_picta_bellii
ENSSMAG00000015834	usb1	83	51.417	ENSCANG00000037135	USB1	99	49.640	Colobus_angolensis_palliatus
ENSSMAG00000015834	usb1	99	49.153	ENSCGRG00001011243	USB1	91	48.375	Cricetulus_griseus_chok1gshd
ENSSMAG00000015834	usb1	99	49.153	ENSCGRG00000013252	USB1	91	48.375	Cricetulus_griseus_crigri
ENSSMAG00000015834	usb1	99	68.814	ENSCSEG00000013881	usb1	93	70.000	Cynoglossus_semilaevis
ENSSMAG00000015834	usb1	80	69.295	ENSCVAG00000009252	usb1	97	69.710	Cyprinodon_variegatus
ENSSMAG00000015834	usb1	80	56.723	ENSDARG00000003841	usb1	97	50.534	Danio_rerio
ENSSMAG00000015834	usb1	84	49.600	ENSDORG00000001888	Usb1	98	48.201	Dipodomys_ordii
ENSSMAG00000015834	usb1	74	38.914	FBgn0037713	CG16790	97	33.455	Drosophila_melanogaster
ENSSMAG00000015834	usb1	99	41.356	ENSETEG00000019682	USB1	97	42.125	Echinops_telfairi
ENSSMAG00000015834	usb1	88	41.304	ENSEBUG00000005889	usb1	82	42.629	Eptatretus_burgeri
ENSSMAG00000015834	usb1	99	47.619	ENSEASG00005005484	USB1	98	48.201	Equus_asinus_asinus
ENSSMAG00000015834	usb1	99	47.782	ENSECAG00000019493	USB1	89	48.375	Equus_caballus
ENSSMAG00000015834	usb1	63	46.524	ENSEEUG00000000154	USB1	58	46.707	Erinaceus_europaeus
ENSSMAG00000015834	usb1	86	57.812	ENSELUG00000010974	usb1	89	57.812	Esox_lucius
ENSSMAG00000015834	usb1	89	47.909	ENSFCAG00000002693	USB1	91	47.909	Felis_catus
ENSSMAG00000015834	usb1	82	52.049	ENSFALG00000006876	USB1	93	50.566	Ficedula_albicollis
ENSSMAG00000015834	usb1	99	47.119	ENSFDAG00000010052	USB1	98	47.636	Fukomys_damarensis
ENSSMAG00000015834	usb1	88	64.368	ENSFHEG00000012334	usb1	97	65.517	Fundulus_heteroclitus
ENSSMAG00000015834	usb1	80	68.354	ENSGMOG00000004228	usb1	100	68.354	Gadus_morhua
ENSSMAG00000015834	usb1	80	53.165	ENSGALG00000035604	USB1	96	49.815	Gallus_gallus
ENSSMAG00000015834	usb1	100	67.568	ENSGAFG00000021890	usb1	99	67.568	Gambusia_affinis
ENSSMAG00000015834	usb1	99	68.027	ENSGACG00000003257	usb1	99	68.027	Gasterosteus_aculeatus
ENSSMAG00000015834	usb1	99	50.853	ENSGAGG00000022572	USB1	98	50.171	Gopherus_agassizii
ENSSMAG00000015834	usb1	83	50.607	ENSGGOG00000017147	USB1	98	48.913	Gorilla_gorilla
ENSSMAG00000015834	usb1	100	69.257	ENSHBUG00000009823	usb1	100	69.257	Haplochromis_burtoni
ENSSMAG00000015834	usb1	99	47.279	ENSHGLG00000016078	USB1	95	48.727	Heterocephalus_glaber_female
ENSSMAG00000015834	usb1	99	47.279	ENSHGLG00100005562	USB1	95	48.727	Heterocephalus_glaber_male
ENSSMAG00000015834	usb1	79	68.670	ENSHCOG00000015633	usb1	87	68.908	Hippocampus_comes
ENSSMAG00000015834	usb1	99	51.438	ENSIPUG00000008601	usb1	80	58.025	Ictalurus_punctatus
ENSSMAG00000015834	usb1	99	46.599	ENSSTOG00000007548	USB1	98	47.552	Ictidomys_tridecemlineatus
ENSSMAG00000015834	usb1	99	47.619	ENSJJAG00000021859	Usb1	97	48.529	Jaculus_jaculus
ENSSMAG00000015834	usb1	99	66.667	ENSKMAG00000007200	usb1	99	66.667	Kryptolebias_marmoratus
ENSSMAG00000015834	usb1	91	65.074	ENSLBEG00000008452	usb1	81	64.835	Labrus_bergylta
ENSSMAG00000015834	usb1	74	51.802	ENSLACG00000000105	USB1	72	52.252	Latimeria_chalumnae
ENSSMAG00000015834	usb1	80	55.042	ENSLOCG00000000465	usb1	79	55.042	Lepisosteus_oculatus
ENSSMAG00000015834	usb1	99	39.867	ENSLAFG00000002267	USB1	84	42.149	Loxodonta_africana
ENSSMAG00000015834	usb1	99	48.299	ENSMFAG00000003926	USB1	98	49.275	Macaca_fascicularis
ENSSMAG00000015834	usb1	99	48.299	ENSMMUG00000022669	USB1	98	49.275	Macaca_mulatta
ENSSMAG00000015834	usb1	99	47.959	ENSMNEG00000042487	USB1	98	48.913	Macaca_nemestrina
ENSSMAG00000015834	usb1	99	48.299	ENSMLEG00000028756	USB1	98	49.275	Mandrillus_leucophaeus
ENSSMAG00000015834	usb1	99	74.490	ENSMAMG00000015092	usb1	99	74.150	Mastacembelus_armatus
ENSSMAG00000015834	usb1	100	68.919	ENSMZEG00005010008	usb1	100	68.919	Maylandia_zebra
ENSSMAG00000015834	usb1	99	47.959	ENSMAUG00000007832	Usb1	98	47.959	Mesocricetus_auratus
ENSSMAG00000015834	usb1	80	52.101	ENSMICG00000004900	USB1	98	48.913	Microcebus_murinus
ENSSMAG00000015834	usb1	99	48.299	ENSMOCG00000022647	Usb1	98	48.299	Microtus_ochrogaster
ENSSMAG00000015834	usb1	82	72.199	ENSMMOG00000000490	usb1	88	72.199	Mola_mola
ENSSMAG00000015834	usb1	99	46.622	ENSMODG00000014067	USB1	99	47.635	Monodelphis_domestica
ENSSMAG00000015834	usb1	100	73.154	ENSMALG00000005930	usb1	100	73.490	Monopterus_albus
ENSSMAG00000015834	usb1	99	48.639	MGP_CAROLIEiJ_G0031421	Usb1	99	51.786	Mus_caroli
ENSSMAG00000015834	usb1	99	48.299	ENSMUSG00000031792	Usb1	99	51.786	Mus_musculus
ENSSMAG00000015834	usb1	99	48.299	MGP_PahariEiJ_G0023019	Usb1	100	53.846	Mus_pahari
ENSSMAG00000015834	usb1	99	48.639	MGP_SPRETEiJ_G0032540	Usb1	98	48.639	Mus_spretus
ENSSMAG00000015834	usb1	99	45.918	ENSMPUG00000004684	USB1	94	46.953	Mustela_putorius_furo
ENSSMAG00000015834	usb1	80	52.941	ENSMLUG00000007400	USB1	97	52.941	Myotis_lucifugus
ENSSMAG00000015834	usb1	99	46.599	ENSNGAG00000009703	Usb1	97	46.739	Nannospalax_galili
ENSSMAG00000015834	usb1	100	63.851	ENSNBRG00000008747	usb1	100	71.053	Neolamprologus_brichardi
ENSSMAG00000015834	usb1	80	50.840	ENSNLEG00000003340	USB1	96	49.425	Nomascus_leucogenys
ENSSMAG00000015834	usb1	99	50.000	ENSODEG00000016214	USB1	97	49.270	Octodon_degus
ENSSMAG00000015834	usb1	99	69.492	ENSONIG00000011063	usb1	100	69.492	Oreochromis_niloticus
ENSSMAG00000015834	usb1	80	52.720	ENSOANG00000012118	USB1	94	52.720	Ornithorhynchus_anatinus
ENSSMAG00000015834	usb1	92	68.635	ENSORLG00000012479	usb1	94	68.635	Oryzias_latipes
ENSSMAG00000015834	usb1	91	69.403	ENSORLG00020018671	usb1	93	69.403	Oryzias_latipes_hni
ENSSMAG00000015834	usb1	92	69.259	ENSORLG00015009679	usb1	94	69.259	Oryzias_latipes_hsok
ENSSMAG00000015834	usb1	100	68.136	ENSOMEG00000012930	usb1	100	68.136	Oryzias_melastigma
ENSSMAG00000015834	usb1	84	48.193	ENSOGAG00000003273	USB1	98	46.739	Otolemur_garnettii
ENSSMAG00000015834	usb1	84	51.004	ENSOARG00000001107	USB1	90	51.004	Ovis_aries
ENSSMAG00000015834	usb1	83	50.202	ENSPPAG00000042137	USB1	98	48.551	Pan_paniscus
ENSSMAG00000015834	usb1	86	48.263	ENSPPRG00000024797	USB1	99	45.714	Panthera_pardus
ENSSMAG00000015834	usb1	89	47.148	ENSPTIG00000007506	USB1	99	42.652	Panthera_tigris_altaica
ENSSMAG00000015834	usb1	83	47.773	ENSPTRG00000008172	USB1	100	52.193	Pan_troglodytes
ENSSMAG00000015834	usb1	99	48.299	ENSPANG00000025138	USB1	98	49.275	Papio_anubis
ENSSMAG00000015834	usb1	81	57.322	ENSPKIG00000015109	usb1	98	49.508	Paramormyrops_kingsleyae
ENSSMAG00000015834	usb1	80	44.770	ENSPSIG00000004305	USB1	100	44.770	Pelodiscus_sinensis
ENSSMAG00000015834	usb1	80	63.136	ENSPMGG00000017725	usb1	85	63.136	Periophthalmus_magnuspinnatus
ENSSMAG00000015834	usb1	99	47.157	ENSPEMG00000016183	Usb1	98	47.331	Peromyscus_maniculatus_bairdii
ENSSMAG00000015834	usb1	80	47.699	ENSPMAG00000000462	usb1	95	47.699	Petromyzon_marinus
ENSSMAG00000015834	usb1	100	67.905	ENSPFOG00000011130	usb1	99	67.905	Poecilia_formosa
ENSSMAG00000015834	usb1	100	67.230	ENSPLAG00000009820	usb1	99	67.230	Poecilia_latipinna
ENSSMAG00000015834	usb1	100	67.905	ENSPMEG00000006402	usb1	99	67.905	Poecilia_mexicana
ENSSMAG00000015834	usb1	88	66.667	ENSPREG00000001047	usb1	98	67.433	Poecilia_reticulata
ENSSMAG00000015834	usb1	77	49.345	ENSPPYG00000007401	USB1	96	47.674	Pongo_abelii
ENSSMAG00000015834	usb1	83	49.798	ENSPCOG00000022612	USB1	98	46.763	Propithecus_coquereli
ENSSMAG00000015834	usb1	99	46.939	ENSPVAG00000004613	USB1	98	48.188	Pteropus_vampyrus
ENSSMAG00000015834	usb1	100	69.257	ENSPNYG00000022262	usb1	100	69.257	Pundamilia_nyererei
ENSSMAG00000015834	usb1	90	55.882	ENSPNAG00000011736	usb1	87	55.882	Pygocentrus_nattereri
ENSSMAG00000015834	usb1	99	48.299	ENSRNOG00000013216	Usb1	98	48.299	Rattus_norvegicus
ENSSMAG00000015834	usb1	83	47.368	ENSRBIG00000044466	USB1	100	52.632	Rhinopithecus_bieti
ENSSMAG00000015834	usb1	83	51.012	ENSRROG00000029211	USB1	98	49.275	Rhinopithecus_roxellana
ENSSMAG00000015834	usb1	81	51.667	ENSSBOG00000029362	USB1	98	48.551	Saimiri_boliviensis_boliviensis
ENSSMAG00000015834	usb1	78	50.216	ENSSHAG00000006993	USB1	89	50.420	Sarcophilus_harrisii
ENSSMAG00000015834	usb1	90	57.090	ENSSFOG00015023663	usb1	80	57.090	Scleropages_formosus
ENSSMAG00000015834	usb1	100	73.244	ENSSDUG00000002949	usb1	100	73.913	Seriola_dumerili
ENSSMAG00000015834	usb1	100	79.322	ENSSLDG00000014174	usb1	100	79.322	Seriola_lalandi_dorsalis
ENSSMAG00000015834	usb1	77	52.632	ENSSPUG00000006741	USB1	100	52.632	Sphenodon_punctatus
ENSSMAG00000015834	usb1	99	69.128	ENSSPAG00000007484	usb1	99	69.697	Stegastes_partitus
ENSSMAG00000015834	usb1	85	50.598	ENSSSCG00000002807	USB1	98	49.458	Sus_scrofa
ENSSMAG00000015834	usb1	76	54.222	ENSTGUG00000004792	USB1	96	49.630	Taeniopygia_guttata
ENSSMAG00000015834	usb1	99	65.646	ENSTRUG00000021069	usb1	99	65.646	Takifugu_rubripes
ENSSMAG00000015834	usb1	99	56.463	ENSTNIG00000000626	usb1	97	56.569	Tetraodon_nigroviridis
ENSSMAG00000015834	usb1	80	36.975	ENSTBEG00000001507	USB1	97	36.975	Tupaia_belangeri
ENSSMAG00000015834	usb1	99	46.939	ENSUAMG00000016823	USB1	96	47.292	Ursus_americanus
ENSSMAG00000015834	usb1	77	51.754	ENSUMAG00000021369	USB1	100	51.754	Ursus_maritimus
ENSSMAG00000015834	usb1	99	46.075	ENSVVUG00000023700	USB1	92	49.206	Vulpes_vulpes
ENSSMAG00000015834	usb1	78	53.247	ENSXETG00000013795	usb1	89	53.165	Xenopus_tropicalis
ENSSMAG00000015834	usb1	89	70.833	ENSXMAG00000024687	usb1	81	67.424	Xiphophorus_maculatus