EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000016028 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 10161 bases
Position: chr13:24205560-24215720
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000026208	SLBP_RNA_bind	PF15247.6	1.3e-28	1	1
ENSSMAP00000026220	SLBP_RNA_bind	PF15247.6	3.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000026524	-	2611	-	ENSSMAP00000026208	306 (aa)	-	A0A2U9CA19
ENSSMAT00000026536	-	2542	-	ENSSMAP00000026220	283 (aa)	-	A0A2U9C7R7

Gene Model

Click here to download ENSSMAG00000016028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000016028's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000016028	-	84	46.241	ENSG00000163950	SLBP	84	47.328	Homo_sapiens
ENSSMAG00000016028	-	100	79.859	ENSAPOG00000004953	slbp	100	79.859	Acanthochromis_polyacanthus
ENSSMAG00000016028	-	51	65.068	ENSAMEG00000016915	SLBP	65	64.430	Ailuropoda_melanoleuca
ENSSMAG00000016028	-	93	74.427	ENSACIG00000022308	slbp	96	74.427	Amphilophus_citrinellus
ENSSMAG00000016028	-	100	80.212	ENSAOCG00000024545	slbp	100	80.212	Amphiprion_ocellaris
ENSSMAG00000016028	-	100	80.919	ENSAPEG00000017629	slbp	100	80.919	Amphiprion_percula
ENSSMAG00000016028	-	100	80.919	ENSATEG00000016358	slbp	100	80.919	Anabas_testudineus
ENSSMAG00000016028	-	75	47.418	ENSAPLG00000015989	-	91	50.235	Anas_platyrhynchos
ENSSMAG00000016028	-	90	45.833	ENSANAG00000034769	SLBP	84	51.613	Aotus_nancymaae
ENSSMAG00000016028	-	100	72.438	ENSACLG00000007036	-	100	72.438	Astatotilapia_calliptera
ENSSMAG00000016028	-	95	56.679	ENSAMXG00000014527	slbp	96	56.679	Astyanax_mexicanus
ENSSMAG00000016028	-	74	54.976	ENSBTAG00000001328	SLBP	84	48.276	Bos_taurus
ENSSMAG00000016028	-	73	52.885	ENSCJAG00000001790	SLBP	72	50.917	Callithrix_jacchus
ENSSMAG00000016028	-	73	54.808	ENSCAFG00000015016	SLBP	69	54.976	Canis_familiaris
ENSSMAG00000016028	-	73	54.808	ENSCAFG00020012334	SLBP	69	54.976	Canis_lupus_dingo
ENSSMAG00000016028	-	67	58.115	ENSCHIG00000019364	SLBP	84	48.276	Capra_hircus
ENSSMAG00000016028	-	72	55.122	ENSTSYG00000000376	SLBP	68	61.818	Carlito_syrichta
ENSSMAG00000016028	-	53	63.576	ENSCPOG00000000031	SLBP	87	44.981	Cavia_porcellus
ENSSMAG00000016028	-	73	54.286	ENSCATG00000029173	SLBP	84	47.328	Cercocebus_atys
ENSSMAG00000016028	-	55	63.291	ENSCLAG00000008157	SLBP	86	47.710	Chinchilla_lanigera
ENSSMAG00000016028	-	63	46.111	ENSCSAG00000015628	SLBP	65	42.786	Chlorocebus_sabaeus
ENSSMAG00000016028	-	69	58.462	ENSCPBG00000000746	SLBP	67	58.462	Chrysemys_picta_bellii
ENSSMAG00000016028	-	51	65.517	ENSCANG00000041008	SLBP	67	63.514	Colobus_angolensis_palliatus
ENSSMAG00000016028	-	77	52.055	ENSCGRG00001009760	-	73	51.802	Cricetulus_griseus_chok1gshd
ENSSMAG00000016028	-	78	51.351	ENSCGRG00001012991	-	74	52.273	Cricetulus_griseus_chok1gshd
ENSSMAG00000016028	-	77	52.055	ENSCGRG00000004506	Slbp	73	51.802	Cricetulus_griseus_crigri
ENSSMAG00000016028	-	98	76.259	ENSCSEG00000020337	-	99	76.259	Cynoglossus_semilaevis
ENSSMAG00000016028	-	92	69.202	ENSCVAG00000019592	-	92	70.155	Cyprinodon_variegatus
ENSSMAG00000016028	-	91	54.135	ENSDARG00000100558	slbp	83	54.887	Danio_rerio
ENSSMAG00000016028	-	74	54.717	ENSDNOG00000047539	SLBP	84	49.603	Dasypus_novemcinctus
ENSSMAG00000016028	-	57	56.098	ENSDORG00000003028	Slbp	87	64.138	Dipodomys_ordii
ENSSMAG00000016028	-	69	53.061	ENSETEG00000004641	SLBP	88	52.511	Echinops_telfairi
ENSSMAG00000016028	-	73	55.502	ENSECAG00000011689	SLBP	62	55.189	Equus_caballus
ENSSMAG00000016028	-	96	58.759	ENSELUG00000012854	slbp	96	58.759	Esox_lucius
ENSSMAG00000016028	-	73	52.174	ENSFCAG00000000169	SLBP	61	64.667	Felis_catus
ENSSMAG00000016028	-	90	48.649	ENSFALG00000010003	-	86	48.649	Ficedula_albicollis
ENSSMAG00000016028	-	55	62.264	ENSFDAG00000007592	SLBP	79	52.466	Fukomys_damarensis
ENSSMAG00000016028	-	93	67.925	ENSFHEG00000007497	slbp	94	67.547	Fundulus_heteroclitus
ENSSMAG00000016028	-	54	70.701	ENSGMOG00000015352	slbp	100	70.000	Gadus_morhua
ENSSMAG00000016028	-	90	50.781	ENSGALG00000015712	SLBP	86	50.781	Gallus_gallus
ENSSMAG00000016028	-	97	68.116	ENSGAFG00000019577	slbp	97	69.884	Gambusia_affinis
ENSSMAG00000016028	-	93	68.421	ENSGACG00000019596	slbp	96	68.561	Gasterosteus_aculeatus
ENSSMAG00000016028	-	74	55.981	ENSGAGG00000012096	SLBP	81	55.981	Gopherus_agassizii
ENSSMAG00000016028	-	73	54.286	ENSGGOG00000003167	SLBP	84	47.328	Gorilla_gorilla
ENSSMAG00000016028	-	100	72.792	ENSHBUG00000003338	-	100	72.792	Haplochromis_burtoni
ENSSMAG00000016028	-	52	53.741	ENSHGLG00000008313	-	78	42.918	Heterocephalus_glaber_female
ENSSMAG00000016028	-	55	54.321	ENSHGLG00000010461	-	65	52.874	Heterocephalus_glaber_female
ENSSMAG00000016028	-	55	54.321	ENSHGLG00100014906	-	65	52.874	Heterocephalus_glaber_male
ENSSMAG00000016028	-	53	54.362	ENSHGLG00100010510	-	78	43.777	Heterocephalus_glaber_male
ENSSMAG00000016028	-	57	60.736	ENSHGLG00100014018	-	95	53.810	Heterocephalus_glaber_male
ENSSMAG00000016028	-	100	68.310	ENSHCOG00000013425	slbp	100	68.310	Hippocampus_comes
ENSSMAG00000016028	-	89	54.118	ENSIPUG00000016780	slbp	92	54.118	Ictalurus_punctatus
ENSSMAG00000016028	-	73	55.288	ENSSTOG00000003262	SLBP	89	46.403	Ictidomys_tridecemlineatus
ENSSMAG00000016028	-	80	52.402	ENSJJAG00000002394	-	77	51.724	Jaculus_jaculus
ENSSMAG00000016028	-	80	52.402	ENSJJAG00000020549	-	76	51.724	Jaculus_jaculus
ENSSMAG00000016028	-	100	68.056	ENSKMAG00000008187	slbp	100	68.056	Kryptolebias_marmoratus
ENSSMAG00000016028	-	99	73.929	ENSLBEG00000024709	slbp	99	73.929	Labrus_bergylta
ENSSMAG00000016028	-	91	48.659	ENSLACG00000014623	SLBP	88	48.659	Latimeria_chalumnae
ENSSMAG00000016028	-	99	56.055	ENSLOCG00000011027	slbp	93	56.055	Lepisosteus_oculatus
ENSSMAG00000016028	-	72	54.589	ENSLAFG00000012933	SLBP	83	53.052	Loxodonta_africana
ENSSMAG00000016028	-	73	54.327	ENSMFAG00000030130	SLBP	80	47.059	Macaca_fascicularis
ENSSMAG00000016028	-	84	46.241	ENSMMUG00000032303	SLBP	88	45.725	Macaca_mulatta
ENSSMAG00000016028	-	53	47.500	ENSMNEG00000008082	SLBP	64	47.239	Macaca_nemestrina
ENSSMAG00000016028	-	57	62.195	ENSMLEG00000024639	SLBP	78	50.000	Mandrillus_leucophaeus
ENSSMAG00000016028	-	99	76.429	ENSMAMG00000001046	-	99	76.429	Mastacembelus_armatus
ENSSMAG00000016028	-	100	72.792	ENSMZEG00005017261	-	100	72.792	Maylandia_zebra
ENSSMAG00000016028	-	74	50.952	ENSMGAG00000013085	SLBP	91	50.952	Meleagris_gallopavo
ENSSMAG00000016028	-	82	51.064	ENSMAUG00000009490	Slbp	77	50.840	Mesocricetus_auratus
ENSSMAG00000016028	-	54	64.286	ENSMICG00000014244	SLBP	62	65.333	Microcebus_murinus
ENSSMAG00000016028	-	82	50.638	ENSMOCG00000015826	Slbp	88	54.028	Microtus_ochrogaster
ENSSMAG00000016028	-	92	66.031	ENSMMOG00000010181	slbp	95	66.031	Mola_mola
ENSSMAG00000016028	-	68	60.000	ENSMODG00000004304	SLBP	79	54.222	Monodelphis_domestica
ENSSMAG00000016028	-	99	80.427	ENSMALG00000013883	-	73	80.427	Monopterus_albus
ENSSMAG00000016028	-	82	50.213	MGP_CAROLIEiJ_G0027117	Slbp	86	54.327	Mus_caroli
ENSSMAG00000016028	-	82	50.213	ENSMUSG00000004642	Slbp	86	53.555	Mus_musculus
ENSSMAG00000016028	-	82	50.213	MGP_PahariEiJ_G0016901	Slbp	86	54.327	Mus_pahari
ENSSMAG00000016028	-	82	50.213	MGP_SPRETEiJ_G0028113	Slbp	86	53.555	Mus_spretus
ENSSMAG00000016028	-	51	63.699	ENSMLUG00000004425	SLBP	61	59.310	Myotis_lucifugus
ENSSMAG00000016028	-	82	51.064	ENSNGAG00000020799	Slbp	85	46.183	Nannospalax_galili
ENSSMAG00000016028	-	86	76.543	ENSNBRG00000006044	-	92	76.860	Neolamprologus_brichardi
ENSSMAG00000016028	-	84	46.241	ENSNLEG00000000048	SLBP	85	46.097	Nomascus_leucogenys
ENSSMAG00000016028	-	58	60.843	ENSMEUG00000002501	SLBP	91	58.857	Notamacropus_eugenii
ENSSMAG00000016028	-	65	56.021	ENSODEG00000012641	SLBP	87	48.263	Octodon_degus
ENSSMAG00000016028	-	99	72.598	ENSONIG00000017469	-	99	72.598	Oreochromis_niloticus
ENSSMAG00000016028	-	51	68.750	ENSOANG00000014243	SLBP	86	53.521	Ornithorhynchus_anatinus
ENSSMAG00000016028	-	100	61.268	ENSORLG00000024887	-	100	61.268	Oryzias_latipes
ENSSMAG00000016028	-	100	59.717	ENSORLG00020007798	slbp	100	59.717	Oryzias_latipes_hni
ENSSMAG00000016028	-	100	60.211	ENSORLG00015016656	slbp	100	60.211	Oryzias_latipes_hsok
ENSSMAG00000016028	-	99	60.993	ENSOMEG00000010818	slbp	99	61.348	Oryzias_melastigma
ENSSMAG00000016028	-	60	59.884	ENSOGAG00000009750	SLBP	84	47.529	Otolemur_garnettii
ENSSMAG00000016028	-	51	65.068	ENSOARG00000016090	SLBP	91	50.926	Ovis_aries
ENSSMAG00000016028	-	73	54.286	ENSPPAG00000033300	SLBP	89	46.930	Pan_paniscus
ENSSMAG00000016028	-	53	60.000	ENSPPRG00000016897	SLBP	70	57.292	Panthera_pardus
ENSSMAG00000016028	-	90	47.471	ENSPTRG00000015832	SLBP	84	47.308	Pan_troglodytes
ENSSMAG00000016028	-	67	54.545	ENSPANG00000004932	SLBP	84	45.149	Papio_anubis
ENSSMAG00000016028	-	95	56.777	ENSPKIG00000006183	slbp	94	56.835	Paramormyrops_kingsleyae
ENSSMAG00000016028	-	87	59.514	ENSPMGG00000017684	-	99	63.679	Periophthalmus_magnuspinnatus
ENSSMAG00000016028	-	77	52.055	ENSPEMG00000018369	Slbp	73	51.802	Peromyscus_maniculatus_bairdii
ENSSMAG00000016028	-	69	59.406	ENSPCIG00000013575	SLBP	63	54.310	Phascolarctos_cinereus
ENSSMAG00000016028	-	97	69.565	ENSPFOG00000000462	slbp	98	69.565	Poecilia_formosa
ENSSMAG00000016028	-	97	69.203	ENSPLAG00000008300	slbp	98	69.203	Poecilia_latipinna
ENSSMAG00000016028	-	97	69.565	ENSPMEG00000020807	slbp	98	69.565	Poecilia_mexicana
ENSSMAG00000016028	-	97	69.203	ENSPREG00000004561	slbp	98	69.203	Poecilia_reticulata
ENSSMAG00000016028	-	73	54.286	ENSPPYG00000014529	SLBP	75	52.036	Pongo_abelii
ENSSMAG00000016028	-	57	62.195	ENSPCOG00000017399	SLBP	62	65.333	Propithecus_coquereli
ENSSMAG00000016028	-	72	51.707	ENSPVAG00000002807	SLBP	68	51.707	Pteropus_vampyrus
ENSSMAG00000016028	-	100	72.792	ENSPNYG00000005451	-	100	72.792	Pundamilia_nyererei
ENSSMAG00000016028	-	96	55.957	ENSPNAG00000018503	slbp	97	55.957	Pygocentrus_nattereri
ENSSMAG00000016028	-	82	50.213	ENSRNOG00000037162	Slbp	77	50.000	Rattus_norvegicus
ENSSMAG00000016028	-	73	54.286	ENSRBIG00000039159	SLBP	84	47.328	Rhinopithecus_bieti
ENSSMAG00000016028	-	80	52.632	ENSRROG00000030081	SLBP	92	46.071	Rhinopithecus_roxellana
ENSSMAG00000016028	-	60	49.189	ENSSBOG00000033897	SLBP	89	48.404	Saimiri_boliviensis_boliviensis
ENSSMAG00000016028	-	68	59.296	ENSSHAG00000013939	SLBP	77	51.406	Sarcophilus_harrisii
ENSSMAG00000016028	-	96	56.777	ENSSFOG00015019429	slbp	94	56.777	Scleropages_formosus
ENSSMAG00000016028	-	97	85.455	ENSSDUG00000000855	-	98	85.455	Seriola_dumerili
ENSSMAG00000016028	-	53	87.417	ENSSLDG00000022893	-	87	87.417	Seriola_lalandi_dorsalis
ENSSMAG00000016028	-	98	61.620	ENSSLDG00000007554	-	92	61.268	Seriola_lalandi_dorsalis
ENSSMAG00000016028	-	89	44.841	ENSSPUG00000016007	SLBP	87	48.047	Sphenodon_punctatus
ENSSMAG00000016028	-	100	78.521	ENSSPAG00000004021	slbp	100	80.000	Stegastes_partitus
ENSSMAG00000016028	-	82	51.709	ENSSSCG00000008676	SLBP	76	51.477	Sus_scrofa
ENSSMAG00000016028	-	90	47.490	ENSTGUG00000010626	-	91	47.266	Taeniopygia_guttata
ENSSMAG00000016028	-	99	70.714	ENSTRUG00000000688	slbp	99	70.714	Takifugu_rubripes
ENSSMAG00000016028	-	92	65.900	ENSTNIG00000000484	-	100	65.900	Tetraodon_nigroviridis
ENSSMAG00000016028	-	51	59.310	ENSTTRG00000004010	-	79	59.310	Tursiops_truncatus
ENSSMAG00000016028	-	51	64.828	ENSTTRG00000010901	-	65	64.828	Tursiops_truncatus
ENSSMAG00000016028	-	73	55.288	ENSUAMG00000012990	SLBP	75	51.515	Ursus_americanus
ENSSMAG00000016028	-	73	54.808	ENSVVUG00000015578	-	69	54.976	Vulpes_vulpes
ENSSMAG00000016028	-	95	46.667	ENSXETG00000003876	slbp	93	46.667	Xenopus_tropicalis
ENSSMAG00000016028	-	88	71.146	ENSXCOG00000008275	slbp	91	72.653	Xiphophorus_couchianus
ENSSMAG00000016028	-	97	68.116	ENSXMAG00000001331	-	94	69.403	Xiphophorus_maculatus