EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000016096 (Gene tree)
Gene ID: -
Gene Symbol: casc3
Alias: -
Full Name: casc3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 8343 bases
Position: chr19:20090738-20099080
Accession: ZDB-GENE-040308-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000026321	Btz	PF09405.10	6.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000026639	-	5307	-	ENSSMAP00000026321	793 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000016096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000016096's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000016096	casc3	55	65.563	ENSG00000108349	CASC3	65	66.667	Homo_sapiens
ENSSMAG00000016096	casc3	100	68.703	ENSAPOG00000008467	casc3	100	69.975	Acanthochromis_polyacanthus
ENSSMAG00000016096	casc3	56	61.728	ENSAMEG00000007764	CASC3	66	67.361	Ailuropoda_melanoleuca
ENSSMAG00000016096	casc3	70	82.237	ENSACIG00000000720	casc3	77	82.979	Amphilophus_citrinellus
ENSSMAG00000016096	casc3	100	69.538	ENSAOCG00000016676	casc3	100	71.820	Amphiprion_ocellaris
ENSSMAG00000016096	casc3	100	69.500	ENSAPEG00000006787	casc3	100	71.144	Amphiprion_percula
ENSSMAG00000016096	casc3	100	72.414	ENSATEG00000017196	casc3	100	71.852	Anabas_testudineus
ENSSMAG00000016096	casc3	63	59.524	ENSACAG00000002674	CASC3	66	66.429	Anolis_carolinensis
ENSSMAG00000016096	casc3	55	58.108	ENSANAG00000034820	-	64	60.759	Aotus_nancymaae
ENSSMAG00000016096	casc3	100	71.197	ENSACLG00000016198	casc3	100	69.004	Astatotilapia_calliptera
ENSSMAG00000016096	casc3	76	52.978	ENSBTAG00000006250	CASC3	75	67.361	Bos_taurus
ENSSMAG00000016096	casc3	75	61.350	ENSCJAG00000016032	CASC3	66	67.361	Callithrix_jacchus
ENSSMAG00000016096	casc3	56	61.728	ENSCAFG00000016141	CASC3	65	67.361	Canis_familiaris
ENSSMAG00000016096	casc3	56	61.728	ENSCAFG00020018882	CASC3	75	67.361	Canis_lupus_dingo
ENSSMAG00000016096	casc3	75	53.674	ENSCHIG00000006338	CASC3	75	66.667	Capra_hircus
ENSSMAG00000016096	casc3	54	68.571	ENSTSYG00000002975	CASC3	66	68.750	Carlito_syrichta
ENSSMAG00000016096	casc3	56	62.805	ENSCAPG00000010514	CASC3	85	67.361	Cavia_aperea
ENSSMAG00000016096	casc3	56	62.805	ENSCPOG00000015139	CASC3	54	48.214	Cavia_porcellus
ENSSMAG00000016096	casc3	58	61.585	ENSCCAG00000033620	CASC3	75	67.361	Cebus_capucinus
ENSSMAG00000016096	casc3	75	53.871	ENSCATG00000033593	CASC3	65	67.361	Cercocebus_atys
ENSSMAG00000016096	casc3	56	63.580	ENSCLAG00000013730	CASC3	68	68.056	Chinchilla_lanigera
ENSSMAG00000016096	casc3	55	66.225	ENSCSAG00000002777	CASC3	65	67.361	Chlorocebus_sabaeus
ENSSMAG00000016096	casc3	72	55.851	ENSCPBG00000004750	CASC3	69	67.361	Chrysemys_picta_bellii
ENSSMAG00000016096	casc3	55	66.225	ENSCANG00000008814	CASC3	66	67.361	Colobus_angolensis_palliatus
ENSSMAG00000016096	casc3	58	64.516	ENSCGRG00001014706	Casc3	66	67.361	Cricetulus_griseus_chok1gshd
ENSSMAG00000016096	casc3	77	52.121	ENSCGRG00000001952	Casc3	71	67.361	Cricetulus_griseus_crigri
ENSSMAG00000016096	casc3	100	68.227	ENSCSEG00000010047	casc3	100	66.996	Cynoglossus_semilaevis
ENSSMAG00000016096	casc3	100	68.040	ENSCVAG00000014935	casc3	100	67.211	Cyprinodon_variegatus
ENSSMAG00000016096	casc3	59	62.195	ENSDNOG00000017249	CASC3	71	66.667	Dasypus_novemcinctus
ENSSMAG00000016096	casc3	57	62.577	ENSETEG00000013720	CASC3	76	48.943	Echinops_telfairi
ENSSMAG00000016096	casc3	74	34.444	ENSEBUG00000010654	casc3	56	45.000	Eptatretus_burgeri
ENSSMAG00000016096	casc3	57	61.585	ENSEASG00005002909	CASC3	75	67.361	Equus_asinus_asinus
ENSSMAG00000016096	casc3	57	61.585	ENSECAG00000019947	CASC3	65	67.361	Equus_caballus
ENSSMAG00000016096	casc3	100	55.822	ENSELUG00000015093	casc3	93	53.189	Esox_lucius
ENSSMAG00000016096	casc3	56	61.728	ENSFCAG00000014998	CASC3	66	67.361	Felis_catus
ENSSMAG00000016096	casc3	67	48.800	ENSFALG00000000412	CASC3	73	66.667	Ficedula_albicollis
ENSSMAG00000016096	casc3	57	66.225	ENSFDAG00000020696	CASC3	71	67.361	Fukomys_damarensis
ENSSMAG00000016096	casc3	79	72.370	ENSFHEG00000015793	casc3	100	68.204	Fundulus_heteroclitus
ENSSMAG00000016096	casc3	60	57.609	ENSGALG00000031813	CASC3	69	66.438	Gallus_gallus
ENSSMAG00000016096	casc3	98	67.875	ENSGAFG00000017148	casc3	86	67.710	Gambusia_affinis
ENSSMAG00000016096	casc3	73	53.500	ENSGAGG00000008432	CASC3	80	67.361	Gopherus_agassizii
ENSSMAG00000016096	casc3	75	52.548	ENSGGOG00000005067	CASC3	66	66.667	Gorilla_gorilla
ENSSMAG00000016096	casc3	100	71.322	ENSHBUG00000013155	casc3	100	69.127	Haplochromis_burtoni
ENSSMAG00000016096	casc3	55	66.225	ENSHGLG00000012117	CASC3	66	67.361	Heterocephalus_glaber_female
ENSSMAG00000016096	casc3	55	66.225	ENSHGLG00100002268	CASC3	74	67.361	Heterocephalus_glaber_male
ENSSMAG00000016096	casc3	100	60.100	ENSHCOG00000002664	casc3	92	57.763	Hippocampus_comes
ENSSMAG00000016096	casc3	59	61.176	ENSSTOG00000006374	CASC3	74	67.361	Ictidomys_tridecemlineatus
ENSSMAG00000016096	casc3	58	60.000	ENSJJAG00000023525	Casc3	66	64.151	Jaculus_jaculus
ENSSMAG00000016096	casc3	94	68.742	ENSKMAG00000019507	casc3	76	85.714	Kryptolebias_marmoratus
ENSSMAG00000016096	casc3	96	69.697	ENSLBEG00000005435	casc3	100	70.438	Labrus_bergylta
ENSSMAG00000016096	casc3	77	49.547	ENSLACG00000013200	CASC3	72	50.000	Latimeria_chalumnae
ENSSMAG00000016096	casc3	67	67.773	ENSLOCG00000013518	casc3	57	67.773	Lepisosteus_oculatus
ENSSMAG00000016096	casc3	56	61.728	ENSLAFG00000000606	CASC3	66	66.667	Loxodonta_africana
ENSSMAG00000016096	casc3	75	53.871	ENSMFAG00000041496	CASC3	72	67.361	Macaca_fascicularis
ENSSMAG00000016096	casc3	55	66.225	ENSMMUG00000045187	CASC3	65	67.361	Macaca_mulatta
ENSSMAG00000016096	casc3	67	53.871	ENSMLEG00000029049	CASC3	73	67.361	Mandrillus_leucophaeus
ENSSMAG00000016096	casc3	96	70.475	ENSMAMG00000005235	casc3	96	68.855	Mastacembelus_armatus
ENSSMAG00000016096	casc3	100	71.197	ENSMZEG00005003815	casc3	100	69.004	Maylandia_zebra
ENSSMAG00000016096	casc3	59	56.989	ENSMGAG00000013247	CASC3	73	66.438	Meleagris_gallopavo
ENSSMAG00000016096	casc3	53	70.000	ENSMICG00000003321	CASC3	65	67.361	Microcebus_murinus
ENSSMAG00000016096	casc3	58	64.516	ENSMOCG00000013644	Casc3	66	67.361	Microtus_ochrogaster
ENSSMAG00000016096	casc3	100	67.079	ENSMMOG00000014339	casc3	82	67.919	Mola_mola
ENSSMAG00000016096	casc3	55	64.667	ENSMODG00000013044	CASC3	56	77.586	Monodelphis_domestica
ENSSMAG00000016096	casc3	60	93.137	ENSMALG00000019771	casc3	81	90.991	Monopterus_albus
ENSSMAG00000016096	casc3	67	65.806	MGP_CAROLIEiJ_G0017099	Casc3	75	68.750	Mus_caroli
ENSSMAG00000016096	casc3	64	65.806	ENSMUSG00000078676	Casc3	66	68.750	Mus_musculus
ENSSMAG00000016096	casc3	64	65.806	MGP_SPRETEiJ_G0017943	Casc3	66	68.750	Mus_spretus
ENSSMAG00000016096	casc3	59	61.728	ENSMPUG00000014903	CASC3	74	67.361	Mustela_putorius_furo
ENSSMAG00000016096	casc3	56	60.366	ENSMLUG00000010520	CASC3	64	65.972	Myotis_lucifugus
ENSSMAG00000016096	casc3	54	67.857	ENSNGAG00000023121	Casc3	71	64.384	Nannospalax_galili
ENSSMAG00000016096	casc3	55	66.225	ENSNLEG00000001598	CASC3	66	67.361	Nomascus_leucogenys
ENSSMAG00000016096	casc3	59	64.706	ENSMEUG00000015662	CASC3	58	63.946	Notamacropus_eugenii
ENSSMAG00000016096	casc3	61	62.069	ENSODEG00000017858	CASC3	66	67.361	Octodon_degus
ENSSMAG00000016096	casc3	100	71.836	ENSONIG00000009337	casc3	100	68.505	Oreochromis_niloticus
ENSSMAG00000016096	casc3	59	61.585	ENSOCUG00000002954	CASC3	66	67.361	Oryctolagus_cuniculus
ENSSMAG00000016096	casc3	78	67.308	ENSORLG00000023125	casc3	100	63.990	Oryzias_latipes
ENSSMAG00000016096	casc3	55	65.563	ENSOGAG00000034486	CASC3	74	66.667	Otolemur_garnettii
ENSSMAG00000016096	casc3	75	53.355	ENSOARG00000013239	CASC3	74	67.361	Ovis_aries
ENSSMAG00000016096	casc3	55	65.563	ENSPPAG00000035069	CASC3	65	66.667	Pan_paniscus
ENSSMAG00000016096	casc3	56	61.728	ENSPPRG00000023670	CASC3	66	67.361	Panthera_pardus
ENSSMAG00000016096	casc3	56	61.111	ENSPTIG00000010891	CASC3	74	51.682	Panthera_tigris_altaica
ENSSMAG00000016096	casc3	55	66.225	ENSPANG00000021708	CASC3	66	67.361	Papio_anubis
ENSSMAG00000016096	casc3	58	64.516	ENSPEMG00000009774	Casc3	67	67.361	Peromyscus_maniculatus_bairdii
ENSSMAG00000016096	casc3	72	51.282	ENSPCIG00000025678	CASC3	72	68.056	Phascolarctos_cinereus
ENSSMAG00000016096	casc3	78	69.352	ENSPFOG00000017632	casc3	96	70.157	Poecilia_formosa
ENSSMAG00000016096	casc3	100	69.938	ENSPLAG00000005268	casc3	100	69.441	Poecilia_latipinna
ENSSMAG00000016096	casc3	51	80.690	ENSPMEG00000010299	casc3	67	81.560	Poecilia_mexicana
ENSSMAG00000016096	casc3	77	72.026	ENSPREG00000011856	casc3	91	71.750	Poecilia_reticulata
ENSSMAG00000016096	casc3	75	53.247	ENSPPYG00000008467	CASC3	66	66.667	Pongo_abelii
ENSSMAG00000016096	casc3	53	70.000	ENSPCOG00000008183	CASC3	74	67.361	Propithecus_coquereli
ENSSMAG00000016096	casc3	56	62.346	ENSPVAG00000008556	CASC3	66	67.361	Pteropus_vampyrus
ENSSMAG00000016096	casc3	100	71.322	ENSPNYG00000011962	casc3	100	69.127	Pundamilia_nyererei
ENSSMAG00000016096	casc3	60	65.161	ENSRNOG00000009716	Casc3	79	68.056	Rattus_norvegicus
ENSSMAG00000016096	casc3	55	66.225	ENSRBIG00000033289	CASC3	66	67.361	Rhinopithecus_bieti
ENSSMAG00000016096	casc3	55	66.225	ENSRROG00000022337	CASC3	66	67.361	Rhinopithecus_roxellana
ENSSMAG00000016096	casc3	57	61.585	ENSSBOG00000031406	CASC3	73	67.361	Saimiri_boliviensis_boliviensis
ENSSMAG00000016096	casc3	59	57.297	ENSSHAG00000013338	CASC3	74	67.361	Sarcophilus_harrisii
ENSSMAG00000016096	casc3	100	72.873	ENSSDUG00000016893	casc3	95	73.325	Seriola_dumerili
ENSSMAG00000016096	casc3	81	75.284	ENSSLDG00000020308	casc3	79	91.538	Seriola_lalandi_dorsalis
ENSSMAG00000016096	casc3	51	60.714	ENSSARG00000010378	CASC3	67	69.014	Sorex_araneus
ENSSMAG00000016096	casc3	100	69.704	ENSSPAG00000023008	casc3	100	70.407	Stegastes_partitus
ENSSMAG00000016096	casc3	67	52.258	ENSSSCG00000017477	CASC3	71	67.361	Sus_scrofa
ENSSMAG00000016096	casc3	50	64.286	ENSTGUG00000002300	CASC3	90	65.263	Taeniopygia_guttata
ENSSMAG00000016096	casc3	96	66.449	ENSTRUG00000000673	casc3	81	69.921	Takifugu_rubripes
ENSSMAG00000016096	casc3	100	60.674	ENSTNIG00000003208	casc3	52	69.399	Tetraodon_nigroviridis
ENSSMAG00000016096	casc3	56	61.728	ENSUAMG00000015116	CASC3	76	67.361	Ursus_americanus
ENSSMAG00000016096	casc3	60	56.085	ENSUMAG00000017697	CASC3	91	65.278	Ursus_maritimus
ENSSMAG00000016096	casc3	56	61.728	ENSVVUG00000000997	CASC3	66	67.361	Vulpes_vulpes
ENSSMAG00000016096	casc3	50	78.261	ENSXETG00000024395	casc3	64	70.677	Xenopus_tropicalis
ENSSMAG00000016096	casc3	100	70.247	ENSXMAG00000013937	casc3	100	70.683	Xiphophorus_maculatus