EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000016143 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: si:dkey-37o8.1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 4324 bases
Position: chr18:318174-322497
Accession: ZDB-GENE-030131-5667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000026394	GTP_EFTU	PF00009.27	2.1e-54	1	1
ENSSMAP00000026394	MMR_HSR1	PF01926.23	8.6e-08	1	1
ENSSMAP00000026394	GTP_EFTU_D2	PF03144.25	8.8e-13	1	1
ENSSMAP00000026394	GTP_EFTU_D3	PF03143.17	3.1e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000026714	-	3747	-	ENSSMAP00000026394	456 (aa)	-	A0A2U9CQR9

Gene Model

Click here to download ENSSMAG00000016143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000016143's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000016143	si:dkey-37o8.1	95	37.011	ENSSMAG00000014782	gspt1l	73	37.011
ENSSMAG00000016143	si:dkey-37o8.1	96	30.405	ENSSMAG00000010053	tufm	86	30.405
ENSSMAG00000016143	si:dkey-37o8.1	87	71.212	ENSSMAG00000019345	EEF1A1	75	71.212
ENSSMAG00000016143	si:dkey-37o8.1	93	70.588	ENSSMAG00000010349	eef1a1b	97	70.588
ENSSMAG00000016143	si:dkey-37o8.1	99	63.636	ENSSMAG00000018469	-	98	63.789
ENSSMAG00000016143	si:dkey-37o8.1	96	38.269	ENSSMAG00000010621	hbs1l	62	38.269
ENSSMAG00000016143	si:dkey-37o8.1	95	36.591	ENSSMAG00000007886	GSPT1	71	36.674
ENSSMAG00000016143	si:dkey-37o8.1	53	66.803	ENSSMAG00000016277	-	97	67.073
ENSSMAG00000016143	si:dkey-37o8.1	100	66.886	ENSSMAG00000018455	-	98	66.886
ENSSMAG00000016143	si:dkey-37o8.1	99	70.925	ENSSMAG00000018483	-	98	70.925

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000016143	si:dkey-37o8.1	100	94.298	ENSAPOG00000016459	si:dkey-37o8.1	100	94.298	Acanthochromis_polyacanthus
ENSSMAG00000016143	si:dkey-37o8.1	96	92.220	ENSACIG00000020985	si:dkey-37o8.1	82	92.220	Amphilophus_citrinellus
ENSSMAG00000016143	si:dkey-37o8.1	100	94.530	ENSAOCG00000002663	si:dkey-37o8.1	100	94.530	Amphiprion_ocellaris
ENSSMAG00000016143	si:dkey-37o8.1	100	94.530	ENSAPEG00000012670	si:dkey-37o8.1	100	94.530	Amphiprion_percula
ENSSMAG00000016143	si:dkey-37o8.1	93	96.209	ENSATEG00000002217	si:dkey-37o8.1	99	96.209	Anabas_testudineus
ENSSMAG00000016143	si:dkey-37o8.1	100	92.544	ENSACLG00000003519	si:dkey-37o8.1	100	92.544	Astatotilapia_calliptera
ENSSMAG00000016143	si:dkey-37o8.1	100	85.153	ENSAMXG00000002728	si:dkey-37o8.1	100	85.153	Astyanax_mexicanus
ENSSMAG00000016143	si:dkey-37o8.1	96	74.487	ENSCPBG00000020570	-	87	74.487	Chrysemys_picta_bellii
ENSSMAG00000016143	si:dkey-37o8.1	100	86.900	ENSCSEG00000019807	si:dkey-37o8.1	100	86.177	Cynoglossus_semilaevis
ENSSMAG00000016143	si:dkey-37o8.1	99	90.308	ENSCVAG00000009828	si:dkey-37o8.1	99	90.308	Cyprinodon_variegatus
ENSSMAG00000016143	si:dkey-37o8.1	99	82.667	ENSDARG00000071727	si:dkey-37o8.1	93	82.667	Danio_rerio
ENSSMAG00000016143	si:dkey-37o8.1	100	84.934	ENSELUG00000007495	si:dkey-37o8.1	100	84.934	Esox_lucius
ENSSMAG00000016143	si:dkey-37o8.1	99	89.800	ENSFHEG00000017452	si:dkey-37o8.1	99	89.800	Fundulus_heteroclitus
ENSSMAG00000016143	si:dkey-37o8.1	99	81.596	ENSGMOG00000006122	si:dkey-37o8.1	99	81.596	Gadus_morhua
ENSSMAG00000016143	si:dkey-37o8.1	98	84.152	ENSGAFG00000000367	si:dkey-37o8.1	99	84.152	Gambusia_affinis
ENSSMAG00000016143	si:dkey-37o8.1	100	91.247	ENSGACG00000004505	si:dkey-37o8.1	100	91.247	Gasterosteus_aculeatus
ENSSMAG00000016143	si:dkey-37o8.1	96	74.943	ENSGAGG00000007724	-	93	77.885	Gopherus_agassizii
ENSSMAG00000016143	si:dkey-37o8.1	100	92.325	ENSHBUG00000015515	si:dkey-37o8.1	100	92.325	Haplochromis_burtoni
ENSSMAG00000016143	si:dkey-37o8.1	99	80.710	ENSHCOG00000001215	si:dkey-37o8.1	100	80.710	Hippocampus_comes
ENSSMAG00000016143	si:dkey-37o8.1	100	82.969	ENSIPUG00000004067	si:dkey-37o8.1	100	82.969	Ictalurus_punctatus
ENSSMAG00000016143	si:dkey-37o8.1	99	90.667	ENSKMAG00000015910	si:dkey-37o8.1	98	90.667	Kryptolebias_marmoratus
ENSSMAG00000016143	si:dkey-37o8.1	100	94.737	ENSLBEG00000021334	si:dkey-37o8.1	90	94.737	Labrus_bergylta
ENSSMAG00000016143	si:dkey-37o8.1	97	77.652	ENSLACG00000003948	si:dkey-37o8.1	96	77.652	Latimeria_chalumnae
ENSSMAG00000016143	si:dkey-37o8.1	99	80.574	ENSLOCG00000011245	si:dkey-37o8.1	99	80.574	Lepisosteus_oculatus
ENSSMAG00000016143	si:dkey-37o8.1	98	76.339	ENSMAMG00000009907	si:dkey-37o8.1	94	76.339	Mastacembelus_armatus
ENSSMAG00000016143	si:dkey-37o8.1	100	92.544	ENSMZEG00005018358	si:dkey-37o8.1	100	92.544	Maylandia_zebra
ENSSMAG00000016143	si:dkey-37o8.1	98	92.857	ENSMMOG00000004111	si:dkey-37o8.1	98	92.857	Mola_mola
ENSSMAG00000016143	si:dkey-37o8.1	96	83.562	ENSMALG00000017152	si:dkey-37o8.1	99	83.562	Monopterus_albus
ENSSMAG00000016143	si:dkey-37o8.1	100	92.544	ENSNBRG00000013552	si:dkey-37o8.1	100	92.544	Neolamprologus_brichardi
ENSSMAG00000016143	si:dkey-37o8.1	100	92.544	ENSONIG00000006165	si:dkey-37o8.1	100	92.544	Oreochromis_niloticus
ENSSMAG00000016143	si:dkey-37o8.1	100	90.789	ENSORLG00000019066	si:dkey-37o8.1	100	90.789	Oryzias_latipes
ENSSMAG00000016143	si:dkey-37o8.1	100	90.789	ENSORLG00020008094	si:dkey-37o8.1	100	90.789	Oryzias_latipes_hni
ENSSMAG00000016143	si:dkey-37o8.1	100	90.570	ENSORLG00015008410	si:dkey-37o8.1	100	90.570	Oryzias_latipes_hsok
ENSSMAG00000016143	si:dkey-37o8.1	100	91.009	ENSOMEG00000001868	si:dkey-37o8.1	100	91.009	Oryzias_melastigma
ENSSMAG00000016143	si:dkey-37o8.1	97	83.973	ENSPKIG00000017246	si:dkey-37o8.1	97	83.973	Paramormyrops_kingsleyae
ENSSMAG00000016143	si:dkey-37o8.1	58	67.778	ENSPSIG00000008080	-	95	67.778	Pelodiscus_sinensis
ENSSMAG00000016143	si:dkey-37o8.1	99	90.244	ENSPFOG00000013173	si:dkey-37o8.1	99	90.244	Poecilia_formosa
ENSSMAG00000016143	si:dkey-37o8.1	99	89.135	ENSPLAG00000010405	si:dkey-37o8.1	99	89.135	Poecilia_latipinna
ENSSMAG00000016143	si:dkey-37o8.1	99	90.687	ENSPMEG00000015233	si:dkey-37o8.1	99	90.687	Poecilia_mexicana
ENSSMAG00000016143	si:dkey-37o8.1	98	90.179	ENSPREG00000006280	si:dkey-37o8.1	99	90.179	Poecilia_reticulata
ENSSMAG00000016143	si:dkey-37o8.1	100	91.886	ENSPNYG00000002059	si:dkey-37o8.1	100	91.886	Pundamilia_nyererei
ENSSMAG00000016143	si:dkey-37o8.1	100	83.843	ENSPNAG00000009990	si:dkey-37o8.1	100	83.843	Pygocentrus_nattereri
ENSSMAG00000016143	si:dkey-37o8.1	98	82.589	ENSSFOG00015019070	si:dkey-37o8.1	98	82.589	Scleropages_formosus
ENSSMAG00000016143	si:dkey-37o8.1	100	95.842	ENSSDUG00000009163	si:dkey-37o8.1	100	95.842	Seriola_dumerili
ENSSMAG00000016143	si:dkey-37o8.1	100	95.624	ENSSLDG00000023761	si:dkey-37o8.1	100	95.624	Seriola_lalandi_dorsalis
ENSSMAG00000016143	si:dkey-37o8.1	99	71.239	ENSSPUG00000007467	-	99	70.742	Sphenodon_punctatus
ENSSMAG00000016143	si:dkey-37o8.1	100	94.530	ENSSPAG00000013856	si:dkey-37o8.1	100	94.530	Stegastes_partitus
ENSSMAG00000016143	si:dkey-37o8.1	98	94.170	ENSTRUG00000009006	si:dkey-37o8.1	99	94.170	Takifugu_rubripes
ENSSMAG00000016143	si:dkey-37o8.1	98	93.318	ENSTNIG00000017138	si:dkey-37o8.1	97	93.318	Tetraodon_nigroviridis
ENSSMAG00000016143	si:dkey-37o8.1	96	77.221	ENSXETG00000017744	42Sp50	96	76.577	Xenopus_tropicalis
ENSSMAG00000016143	si:dkey-37o8.1	98	90.625	ENSXCOG00000012296	si:dkey-37o8.1	99	90.625	Xiphophorus_couchianus
ENSSMAG00000016143	si:dkey-37o8.1	99	90.687	ENSXMAG00000001998	si:dkey-37o8.1	99	90.687	Xiphophorus_maculatus