EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000016151 (Gene tree)
Gene ID: -
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 37993 bases
Position: chr6:21753042-21791034
Accession: ZDB-GENE-070112-1412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000026425	SHQ1	PF04925.15	4.2e-66	1	1
ENSSMAP00000026403	SHQ1	PF04925.15	8.3e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000026746	-	2619	-	ENSSMAP00000026425	603 (aa)	-	A0A2U9BHA0
ENSSMAT00000026723	-	2745	-	ENSSMAP00000026403	645 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000016151's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000016151's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000016151	shq1	72	63.431	ENSG00000144736	SHQ1	96	72.917	Homo_sapiens
ENSSMAG00000016151	shq1	100	77.325	ENSAPOG00000000397	shq1	100	77.651	Acanthochromis_polyacanthus
ENSSMAG00000016151	shq1	90	53.136	ENSAMEG00000015140	SHQ1	77	62.277	Ailuropoda_melanoleuca
ENSSMAG00000016151	shq1	100	76.672	ENSACIG00000021249	shq1	100	76.183	Amphilophus_citrinellus
ENSSMAG00000016151	shq1	100	78.827	ENSAOCG00000023311	shq1	100	78.176	Amphiprion_ocellaris
ENSSMAG00000016151	shq1	100	78.525	ENSAPEG00000021686	shq1	100	78.852	Amphiprion_percula
ENSSMAG00000016151	shq1	99	79.132	ENSATEG00000008475	shq1	99	79.270	Anabas_testudineus
ENSSMAG00000016151	shq1	73	59.465	ENSAPLG00000013926	SHQ1	88	59.911	Anas_platyrhynchos
ENSSMAG00000016151	shq1	70	62.645	ENSACAG00000014809	SHQ1	64	63.014	Anolis_carolinensis
ENSSMAG00000016151	shq1	92	39.267	ENSANAG00000030500	-	99	38.368	Aotus_nancymaae
ENSSMAG00000016151	shq1	77	60.208	ENSANAG00000029241	SHQ1	76	63.205	Aotus_nancymaae
ENSSMAG00000016151	shq1	99	73.964	ENSACLG00000023077	shq1	99	71.044	Astatotilapia_calliptera
ENSSMAG00000016151	shq1	70	64.871	ENSAMXG00000043822	shq1	91	54.181	Astyanax_mexicanus
ENSSMAG00000016151	shq1	72	62.754	ENSBTAG00000005436	SHQ1	76	62.754	Bos_taurus
ENSSMAG00000016151	shq1	70	31.881	WBGene00021655	Y48A5A.1	90	31.618	Caenorhabditis_elegans
ENSSMAG00000016151	shq1	72	62.754	ENSCJAG00000015131	SHQ1	76	62.754	Callithrix_jacchus
ENSSMAG00000016151	shq1	92	54.138	ENSCAFG00000006434	SHQ1	77	63.393	Canis_familiaris
ENSSMAG00000016151	shq1	92	54.310	ENSCAFG00020016743	SHQ1	77	63.616	Canis_lupus_dingo
ENSSMAG00000016151	shq1	92	54.017	ENSCHIG00000012271	SHQ1	69	62.980	Capra_hircus
ENSSMAG00000016151	shq1	72	58.864	ENSTSYG00000014439	SHQ1	77	58.864	Carlito_syrichta
ENSSMAG00000016151	shq1	73	62.329	ENSCAPG00000009343	SHQ1	95	62.329	Cavia_aperea
ENSSMAG00000016151	shq1	90	53.322	ENSCPOG00000011443	SHQ1	96	53.710	Cavia_porcellus
ENSSMAG00000016151	shq1	72	55.305	ENSCCAG00000027080	SHQ1	75	54.464	Cebus_capucinus
ENSSMAG00000016151	shq1	80	44.715	ENSCCAG00000036087	-	76	46.606	Cebus_capucinus
ENSSMAG00000016151	shq1	72	63.657	ENSCATG00000041238	SHQ1	77	63.029	Cercocebus_atys
ENSSMAG00000016151	shq1	91	50.166	ENSCLAG00000004206	SHQ1	76	61.851	Chinchilla_lanigera
ENSSMAG00000016151	shq1	57	61.299	ENSCSAG00000011514	SHQ1	73	60.556	Chlorocebus_sabaeus
ENSSMAG00000016151	shq1	56	51.734	ENSCHOG00000003273	-	99	51.734	Choloepus_hoffmanni
ENSSMAG00000016151	shq1	71	61.416	ENSCPBG00000006441	SHQ1	71	63.014	Chrysemys_picta_bellii
ENSSMAG00000016151	shq1	65	42.386	ENSCING00000008013	-	85	42.132	Ciona_intestinalis
ENSSMAG00000016151	shq1	67	39.268	ENSCSAVG00000002332	-	98	40.741	Ciona_savignyi
ENSSMAG00000016151	shq1	91	52.981	ENSCANG00000039295	SHQ1	78	62.584	Colobus_angolensis_palliatus
ENSSMAG00000016151	shq1	72	62.162	ENSCGRG00001012583	Shq1	78	61.712	Cricetulus_griseus_chok1gshd
ENSSMAG00000016151	shq1	72	62.162	ENSCGRG00000009849	Shq1	78	61.712	Cricetulus_griseus_crigri
ENSSMAG00000016151	shq1	99	72.581	ENSCSEG00000007829	shq1	99	72.890	Cynoglossus_semilaevis
ENSSMAG00000016151	shq1	99	71.906	ENSCVAG00000020049	shq1	99	72.093	Cyprinodon_variegatus
ENSSMAG00000016151	shq1	71	66.900	ENSDARG00000058522	shq1	97	53.312	Danio_rerio
ENSSMAG00000016151	shq1	92	52.721	ENSDNOG00000033937	SHQ1	98	52.890	Dasypus_novemcinctus
ENSSMAG00000016151	shq1	73	54.241	ENSETEG00000005766	SHQ1	78	54.018	Echinops_telfairi
ENSSMAG00000016151	shq1	60	50.000	ENSEBUG00000005445	shq1	79	50.284	Eptatretus_burgeri
ENSSMAG00000016151	shq1	72	63.431	ENSEASG00005002237	SHQ1	76	63.431	Equus_asinus_asinus
ENSSMAG00000016151	shq1	72	63.431	ENSECAG00000015673	SHQ1	75	63.431	Equus_caballus
ENSSMAG00000016151	shq1	72	62.980	ENSEEUG00000010568	SHQ1	96	53.860	Erinaceus_europaeus
ENSSMAG00000016151	shq1	98	64.725	ENSELUG00000003476	shq1	98	64.745	Esox_lucius
ENSSMAG00000016151	shq1	92	54.750	ENSFCAG00000012781	SHQ1	78	63.393	Felis_catus
ENSSMAG00000016151	shq1	72	62.077	ENSFALG00000013428	SHQ1	72	62.302	Ficedula_albicollis
ENSSMAG00000016151	shq1	72	62.077	ENSFDAG00000005595	SHQ1	91	52.020	Fukomys_damarensis
ENSSMAG00000016151	shq1	98	71.309	ENSFHEG00000017552	shq1	99	71.309	Fundulus_heteroclitus
ENSSMAG00000016151	shq1	65	73.522	ENSGMOG00000007350	shq1	100	73.522	Gadus_morhua
ENSSMAG00000016151	shq1	72	61.312	ENSGALG00000007798	SHQ1	72	61.036	Gallus_gallus
ENSSMAG00000016151	shq1	65	82.776	ENSGACG00000011797	shq1	100	83.033	Gasterosteus_aculeatus
ENSSMAG00000016151	shq1	90	52.759	ENSGGOG00000034818	SHQ1	76	62.613	Gorilla_gorilla
ENSSMAG00000016151	shq1	99	73.632	ENSHBUG00000010857	shq1	99	74.129	Haplochromis_burtoni
ENSSMAG00000016151	shq1	95	51.765	ENSHGLG00000003637	SHQ1	88	53.076	Heterocephalus_glaber_female
ENSSMAG00000016151	shq1	95	52.108	ENSHGLG00100011957	SHQ1	88	53.086	Heterocephalus_glaber_male
ENSSMAG00000016151	shq1	100	66.283	ENSHCOG00000010799	shq1	100	65.568	Hippocampus_comes
ENSSMAG00000016151	shq1	98	55.008	ENSIPUG00000001247	shq1	88	56.673	Ictalurus_punctatus
ENSSMAG00000016151	shq1	91	53.381	ENSSTOG00000010043	SHQ1	99	52.381	Ictidomys_tridecemlineatus
ENSSMAG00000016151	shq1	72	62.528	ENSJJAG00000017611	Shq1	78	62.528	Jaculus_jaculus
ENSSMAG00000016151	shq1	100	71.901	ENSKMAG00000004457	shq1	100	72.085	Kryptolebias_marmoratus
ENSSMAG00000016151	shq1	99	51.447	ENSLACG00000014243	SHQ1	86	53.276	Latimeria_chalumnae
ENSSMAG00000016151	shq1	99	55.662	ENSLOCG00000009970	shq1	97	57.867	Lepisosteus_oculatus
ENSSMAG00000016151	shq1	72	43.736	ENSMFAG00000037396	-	75	43.115	Macaca_fascicularis
ENSSMAG00000016151	shq1	72	63.657	ENSMFAG00000039148	SHQ1	77	63.029	Macaca_fascicularis
ENSSMAG00000016151	shq1	72	43.736	ENSMMUG00000021761	-	75	43.115	Macaca_mulatta
ENSSMAG00000016151	shq1	64	62.532	ENSMMUG00000009571	SHQ1	72	61.845	Macaca_mulatta
ENSSMAG00000016151	shq1	72	63.657	ENSMNEG00000032667	SHQ1	77	63.029	Macaca_nemestrina
ENSSMAG00000016151	shq1	72	63.205	ENSMLEG00000038493	SHQ1	77	62.584	Mandrillus_leucophaeus
ENSSMAG00000016151	shq1	99	75.481	ENSMAMG00000023432	shq1	96	75.201	Mastacembelus_armatus
ENSSMAG00000016151	shq1	99	73.798	ENSMZEG00005008649	shq1	99	74.295	Maylandia_zebra
ENSSMAG00000016151	shq1	72	60.497	ENSMGAG00000009640	SHQ1	72	61.098	Meleagris_gallopavo
ENSSMAG00000016151	shq1	72	62.387	ENSMAUG00000022030	Shq1	78	62.077	Mesocricetus_auratus
ENSSMAG00000016151	shq1	91	52.604	ENSMICG00000009224	SHQ1	76	61.712	Microcebus_murinus
ENSSMAG00000016151	shq1	73	63.029	ENSMOCG00000017836	Shq1	79	62.584	Microtus_ochrogaster
ENSSMAG00000016151	shq1	99	74.415	ENSMMOG00000010569	shq1	99	74.124	Mola_mola
ENSSMAG00000016151	shq1	78	54.733	ENSMODG00000003926	SHQ1	78	58.998	Monodelphis_domestica
ENSSMAG00000016151	shq1	99	79.700	ENSMALG00000008870	shq1	99	80.033	Monopterus_albus
ENSSMAG00000016151	shq1	72	61.521	MGP_CAROLIEiJ_G0028689	Shq1	78	61.745	Mus_caroli
ENSSMAG00000016151	shq1	72	62.302	ENSMUSG00000035378	Shq1	78	62.302	Mus_musculus
ENSSMAG00000016151	shq1	72	62.077	MGP_PahariEiJ_G0022440	Shq1	77	62.754	Mus_pahari
ENSSMAG00000016151	shq1	77	59.748	MGP_SPRETEiJ_G0029717	Shq1	78	61.969	Mus_spretus
ENSSMAG00000016151	shq1	96	51.155	ENSMPUG00000017006	SHQ1	75	62.528	Mustela_putorius_furo
ENSSMAG00000016151	shq1	65	60.500	ENSMLUG00000013539	SHQ1	75	60.500	Myotis_lucifugus
ENSSMAG00000016151	shq1	76	57.430	ENSNGAG00000023317	Shq1	70	64.828	Nannospalax_galili
ENSSMAG00000016151	shq1	84	70.760	ENSNBRG00000024004	shq1	98	71.540	Neolamprologus_brichardi
ENSSMAG00000016151	shq1	91	51.064	ENSNLEG00000002731	SHQ1	76	63.063	Nomascus_leucogenys
ENSSMAG00000016151	shq1	67	57.407	ENSMEUG00000009350	-	63	65.789	Notamacropus_eugenii
ENSSMAG00000016151	shq1	74	59.211	ENSODEG00000009192	SHQ1	98	58.996	Octodon_degus
ENSSMAG00000016151	shq1	99	73.964	ENSONIG00000020264	shq1	99	74.627	Oreochromis_niloticus
ENSSMAG00000016151	shq1	93	53.846	ENSOCUG00000016695	SHQ1	99	49.137	Oryctolagus_cuniculus
ENSSMAG00000016151	shq1	88	70.037	ENSORLG00000023538	shq1	92	70.412	Oryzias_latipes
ENSSMAG00000016151	shq1	99	65.391	ENSORLG00020003697	shq1	95	68.761	Oryzias_latipes_hni
ENSSMAG00000016151	shq1	99	64.226	ENSORLG00015021040	shq1	92	69.476	Oryzias_latipes_hsok
ENSSMAG00000016151	shq1	93	68.739	ENSOMEG00000001225	shq1	97	68.917	Oryzias_melastigma
ENSSMAG00000016151	shq1	77	59.671	ENSOGAG00000003898	SHQ1	78	62.332	Otolemur_garnettii
ENSSMAG00000016151	shq1	94	54.266	ENSOARG00000009547	SHQ1	76	62.332	Ovis_aries
ENSSMAG00000016151	shq1	72	63.657	ENSPPAG00000027714	SHQ1	76	63.657	Pan_paniscus
ENSSMAG00000016151	shq1	77	43.451	ENSPPAG00000043263	-	75	44.395	Pan_paniscus
ENSSMAG00000016151	shq1	92	54.655	ENSPPRG00000004769	SHQ1	98	54.231	Panthera_pardus
ENSSMAG00000016151	shq1	92	51.826	ENSPTIG00000011478	SHQ1	77	59.819	Panthera_tigris_altaica
ENSSMAG00000016151	shq1	72	63.657	ENSPTRG00000015106	SHQ1	76	63.657	Pan_troglodytes
ENSSMAG00000016151	shq1	77	42.500	ENSPTRG00000048303	-	75	43.371	Pan_troglodytes
ENSSMAG00000016151	shq1	72	63.883	ENSPANG00000002881	SHQ1	77	63.474	Papio_anubis
ENSSMAG00000016151	shq1	98	55.912	ENSPKIG00000021517	shq1	99	55.464	Paramormyrops_kingsleyae
ENSSMAG00000016151	shq1	72	60.811	ENSPSIG00000005536	SHQ1	72	61.036	Pelodiscus_sinensis
ENSSMAG00000016151	shq1	99	62.833	ENSPMGG00000008838	shq1	99	63.333	Periophthalmus_magnuspinnatus
ENSSMAG00000016151	shq1	72	63.063	ENSPEMG00000000251	Shq1	77	62.613	Peromyscus_maniculatus_bairdii
ENSSMAG00000016151	shq1	71	56.236	ENSPMAG00000005372	shq1	98	56.881	Petromyzon_marinus
ENSSMAG00000016151	shq1	91	68.852	ENSPFOG00000003118	shq1	98	70.182	Poecilia_formosa
ENSSMAG00000016151	shq1	76	66.812	ENSPMEG00000011076	shq1	97	67.756	Poecilia_mexicana
ENSSMAG00000016151	shq1	83	68.663	ENSPREG00000000591	shq1	92	69.522	Poecilia_reticulata
ENSSMAG00000016151	shq1	77	60.417	ENSPPYG00000013717	SHQ1	77	62.723	Pongo_abelii
ENSSMAG00000016151	shq1	72	63.657	ENSPCAG00000009035	SHQ1	77	63.657	Procavia_capensis
ENSSMAG00000016151	shq1	91	52.901	ENSPCOG00000008415	SHQ1	96	53.065	Propithecus_coquereli
ENSSMAG00000016151	shq1	90	54.902	ENSPVAG00000017392	SHQ1	77	62.054	Pteropus_vampyrus
ENSSMAG00000016151	shq1	99	73.964	ENSPNYG00000003878	shq1	99	74.295	Pundamilia_nyererei
ENSSMAG00000016151	shq1	98	57.818	ENSPNAG00000026840	shq1	99	57.051	Pygocentrus_nattereri
ENSSMAG00000016151	shq1	72	61.745	ENSRNOG00000005433	Shq1	74	61.969	Rattus_norvegicus
ENSSMAG00000016151	shq1	91	51.295	ENSRBIG00000026280	SHQ1	76	61.098	Rhinopithecus_bieti
ENSSMAG00000016151	shq1	91	53.242	ENSRROG00000034126	SHQ1	77	63.514	Rhinopithecus_roxellana
ENSSMAG00000016151	shq1	72	55.982	ENSSBOG00000021038	SHQ1	75	55.357	Saimiri_boliviensis_boliviensis
ENSSMAG00000016151	shq1	76	60.814	ENSSHAG00000015077	SHQ1	77	62.329	Sarcophilus_harrisii
ENSSMAG00000016151	shq1	99	59.699	ENSSFOG00015016241	shq1	99	59.699	Scleropages_formosus
ENSSMAG00000016151	shq1	100	81.759	ENSSDUG00000011986	shq1	100	82.410	Seriola_dumerili
ENSSMAG00000016151	shq1	100	80.360	ENSSLDG00000013908	shq1	100	82.488	Seriola_lalandi_dorsalis
ENSSMAG00000016151	shq1	92	46.794	ENSSARG00000007119	SHQ1	78	52.045	Sorex_araneus
ENSSMAG00000016151	shq1	56	62.571	ENSSPUG00000011526	-	65	62.571	Sphenodon_punctatus
ENSSMAG00000016151	shq1	71	62.500	ENSSSCG00000011518	SHQ1	76	62.500	Sus_scrofa
ENSSMAG00000016151	shq1	67	62.679	ENSTGUG00000009933	SHQ1	76	62.132	Taeniopygia_guttata
ENSSMAG00000016151	shq1	99	69.435	ENSTRUG00000009446	shq1	99	69.269	Takifugu_rubripes
ENSSMAG00000016151	shq1	67	75.366	ENSTNIG00000007354	shq1	97	74.545	Tetraodon_nigroviridis
ENSSMAG00000016151	shq1	72	62.077	ENSTTRG00000005320	SHQ1	77	62.077	Tursiops_truncatus
ENSSMAG00000016151	shq1	90	53.710	ENSUMAG00000024031	SHQ1	75	62.442	Ursus_maritimus
ENSSMAG00000016151	shq1	50	63.107	ENSVPAG00000004880	SHQ1	60	63.208	Vicugna_pacos
ENSSMAG00000016151	shq1	90	54.497	ENSVVUG00000013906	SHQ1	77	63.170	Vulpes_vulpes
ENSSMAG00000016151	shq1	72	59.453	ENSXETG00000032215	shq1	71	60.046	Xenopus_tropicalis