EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000016277 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 1097 bases
Position: chr4:3365702-3366798
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000026669	GTP_EFTU_D2	PF03144.25	7.5e-14	1	1
ENSSMAP00000026652	GTP_EFTU_D2	PF03144.25	1.9e-07	1	1
ENSSMAP00000026652	GTP_EFTU_D3	PF03143.17	1.2e-41	1	1
ENSSMAP00000026669	GTP_EFTU_D3	PF03143.17	2.6e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000026972	-	573	-	ENSSMAP00000026652	190 (aa)	-	-
ENSSMAT00000026987	-	765	-	ENSSMAP00000026669	254 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000016277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000016277's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000016277	-	94	89.326	ENSSMAG00000018469	-	55	78.571
ENSSMAG00000016277	-	85	82.949	ENSSMAG00000010349	eef1a1b	50	82.949
ENSSMAG00000016277	-	58	56.757	ENSSMAG00000018446	-	94	56.604
ENSSMAG00000016277	-	97	67.073	ENSSMAG00000016143	si:dkey-37o8.1	53	66.803
ENSSMAG00000016277	-	100	76.078	ENSSMAG00000018455	-	53	77.143
ENSSMAG00000016277	-	100	84.314	ENSSMAG00000018483	-	52	85.477

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000016277	-	57	85.321	ENSAPOG00000004775	-	89	85.321	Acanthochromis_polyacanthus
ENSSMAG00000016277	-	96	93.443	ENSAPOG00000004714	-	54	93.443	Acanthochromis_polyacanthus
ENSSMAG00000016277	-	87	86.145	ENSAPOG00000004685	-	51	82.065	Acanthochromis_polyacanthus
ENSSMAG00000016277	-	100	90.945	ENSACIG00000001219	-	59	90.984	Amphilophus_citrinellus
ENSSMAG00000016277	-	100	88.583	ENSAOCG00000022039	-	53	89.344	Amphiprion_ocellaris
ENSSMAG00000016277	-	96	93.852	ENSAOCG00000022002	-	59	93.852	Amphiprion_ocellaris
ENSSMAG00000016277	-	100	89.370	ENSAPEG00000016361	-	53	90.164	Amphiprion_percula
ENSSMAG00000016277	-	96	91.803	ENSATEG00000003244	-	51	91.803	Anabas_testudineus
ENSSMAG00000016277	-	100	90.551	ENSACLG00000022560	-	53	90.574	Astatotilapia_calliptera
ENSSMAG00000016277	-	100	78.039	WBGene00001169	eef-1A.2	57	78.776	Caenorhabditis_elegans
ENSSMAG00000016277	-	100	78.039	WBGene00001168	eef-1A.1	53	78.776	Caenorhabditis_elegans
ENSSMAG00000016277	-	100	71.815	ENSCING00000007703	-	51	73.950	Ciona_intestinalis
ENSSMAG00000016277	-	94	79.330	ENSCING00000018894	-	53	76.113	Ciona_intestinalis
ENSSMAG00000016277	-	96	72.984	ENSCING00000005126	-	53	72.984	Ciona_intestinalis
ENSSMAG00000016277	-	98	81.283	ENSCING00000021478	-	53	79.918	Ciona_intestinalis
ENSSMAG00000016277	-	94	79.888	ENSCSAVG00000009663	-	52	78.601	Ciona_savignyi
ENSSMAG00000016277	-	97	83.152	ENSCSAVG00000006357	-	84	84.173	Ciona_savignyi
ENSSMAG00000016277	-	94	80.447	ENSCSAVG00000003196	-	52	74.390	Ciona_savignyi
ENSSMAG00000016277	-	100	78.824	ENSCSEG00000007972	-	59	79.184	Cynoglossus_semilaevis
ENSSMAG00000016277	-	96	93.033	ENSCSEG00000008011	-	53	93.033	Cynoglossus_semilaevis
ENSSMAG00000016277	-	99	79.447	ENSCSEG00000007992	-	59	79.508	Cynoglossus_semilaevis
ENSSMAG00000016277	-	96	92.623	ENSCVAG00000019356	-	53	92.623	Cyprinodon_variegatus
ENSSMAG00000016277	-	96	77.959	FBgn0000557	eEF1alpha2	53	77.959	Drosophila_melanogaster
ENSSMAG00000016277	-	100	80.784	FBgn0284245	eEF1alpha1	52	81.328	Drosophila_melanogaster
ENSSMAG00000016277	-	99	75.494	ENSEBUG00000015814	-	53	76.230	Eptatretus_burgeri
ENSSMAG00000016277	-	96	93.033	ENSFHEG00000015054	-	53	93.033	Fundulus_heteroclitus
ENSSMAG00000016277	-	96	93.033	ENSGAFG00000014646	-	53	93.033	Gambusia_affinis
ENSSMAG00000016277	-	96	93.852	ENSGACG00000002182	-	53	93.852	Gasterosteus_aculeatus
ENSSMAG00000016277	-	100	90.551	ENSGACG00000002143	-	53	90.984	Gasterosteus_aculeatus
ENSSMAG00000016277	-	99	90.873	ENSHBUG00000017166	-	91	90.909	Haplochromis_burtoni
ENSSMAG00000016277	-	96	93.443	ENSHCOG00000008468	-	53	93.443	Hippocampus_comes
ENSSMAG00000016277	-	99	80.315	ENSHCOG00000008489	-	51	82.128	Hippocampus_comes
ENSSMAG00000016277	-	96	94.262	ENSLBEG00000002759	-	53	94.262	Labrus_bergylta
ENSSMAG00000016277	-	99	78.261	ENSLBEG00000002955	-	53	78.279	Labrus_bergylta
ENSSMAG00000016277	-	96	92.213	ENSMAMG00000007715	-	53	92.213	Mastacembelus_armatus
ENSSMAG00000016277	-	99	79.842	ENSMMOG00000001106	-	53	80.328	Mola_mola
ENSSMAG00000016277	-	96	90.574	ENSMMOG00000001165	-	61	90.574	Mola_mola
ENSSMAG00000016277	-	98	71.888	ENSMMOG00000018160	-	60	74.786	Mola_mola
ENSSMAG00000016277	-	74	86.429	ENSMALG00000012689	-	73	86.429	Monopterus_albus
ENSSMAG00000016277	-	100	90.945	ENSNBRG00000017346	-	56	90.984	Neolamprologus_brichardi
ENSSMAG00000016277	-	96	92.623	ENSORLG00000007614	eef1a	53	92.623	Oryzias_latipes
ENSSMAG00000016277	-	100	91.406	ENSORLG00015002397	-	53	93.033	Oryzias_latipes_hsok
ENSSMAG00000016277	-	96	93.033	ENSOMEG00000018226	-	53	93.033	Oryzias_melastigma
ENSSMAG00000016277	-	89	52.071	ENSPMGG00000022427	-	50	50.000	Periophthalmus_magnuspinnatus
ENSSMAG00000016277	-	96	90.204	ENSPMGG00000023911	-	54	90.535	Periophthalmus_magnuspinnatus
ENSSMAG00000016277	-	96	93.033	ENSPFOG00000003924	-	59	93.033	Poecilia_formosa
ENSSMAG00000016277	-	96	93.033	ENSPLAG00000004316	-	53	93.033	Poecilia_latipinna
ENSSMAG00000016277	-	96	92.623	ENSPMEG00000001010	-	53	92.623	Poecilia_mexicana
ENSSMAG00000016277	-	100	90.196	ENSPREG00000008243	-	53	92.213	Poecilia_reticulata
ENSSMAG00000016277	-	100	90.551	ENSPNYG00000007263	-	53	90.574	Pundamilia_nyererei
ENSSMAG00000016277	-	92	79.828	YPR080W	TEF1	53	77.686	Saccharomyces_cerevisiae
ENSSMAG00000016277	-	92	79.828	YBR118W	TEF2	53	77.686	Saccharomyces_cerevisiae
ENSSMAG00000016277	-	96	92.213	ENSSDUG00000008198	-	53	92.213	Seriola_dumerili
ENSSMAG00000016277	-	96	88.525	ENSSPAG00000001710	-	53	88.525	Stegastes_partitus
ENSSMAG00000016277	-	96	92.623	ENSTRUG00000005727	ef-1a	53	92.623	Takifugu_rubripes
ENSSMAG00000016277	-	99	80.632	ENSTRUG00000005066	-	53	81.148	Takifugu_rubripes
ENSSMAG00000016277	-	96	92.213	ENSTNIG00000002619	-	53	92.213	Tetraodon_nigroviridis
ENSSMAG00000016277	-	99	75.494	ENSTNIG00000002617	-	51	78.512	Tetraodon_nigroviridis
ENSSMAG00000016277	-	96	93.033	ENSXCOG00000001542	-	55	93.033	Xiphophorus_couchianus