EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000016376 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 4981 bases
Position: chr1:19069341-19074321
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000026794	MMR_HSR1	PF01926.23	4.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000027119	-	2307	-	ENSSMAP00000026794	200 (aa)	-	A0A2U9AYA3

Gene Model

Click here to download ENSSMAG00000016376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000016376's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000016376	-	88	37.430	ENSSMAG00000011579	RAB7A	86	37.430
ENSSMAG00000016376	-	96	36.269	ENSSMAG00000014984	rras	96	36.269
ENSSMAG00000016376	-	73	44.079	ENSSMAG00000012178	-	63	44.079
ENSSMAG00000016376	-	84	39.053	ENSSMAG00000020311	rab42a	78	39.053
ENSSMAG00000016376	-	78	31.875	ENSSMAG00000009101	-	75	31.875
ENSSMAG00000016376	-	88	36.158	ENSSMAG00000006341	rab23	90	35.979
ENSSMAG00000016376	-	99	47.030	ENSSMAG00000000660	rab35b	100	47.030
ENSSMAG00000016376	-	84	47.024	ENSSMAG00000001002	rab2a	79	47.024
ENSSMAG00000016376	-	81	32.948	ENSSMAG00000002148	rasl11a	67	32.948
ENSSMAG00000016376	-	94	42.347	ENSSMAG00000013733	rab33a	72	42.347
ENSSMAG00000016376	-	98	54.000	ENSSMAG00000021049	-	98	54.000
ENSSMAG00000016376	-	79	44.304	ENSSMAG00000017205	-	76	43.038
ENSSMAG00000016376	-	83	42.771	ENSSMAG00000016183	rab25b	79	42.771
ENSSMAG00000016376	-	79	43.671	ENSSMAG00000015774	rab41	75	43.671
ENSSMAG00000016376	-	82	38.462	ENSSMAG00000006709	rab9b	81	38.462
ENSSMAG00000016376	-	83	30.409	ENSSMAG00000016456	rasd4	78	30.409
ENSSMAG00000016376	-	81	31.953	ENSSMAG00000014061	rasl11b	72	30.601
ENSSMAG00000016376	-	86	54.386	ENSSMAG00000005651	-	81	54.386
ENSSMAG00000016376	-	84	37.209	ENSSMAG00000013945	si:dkey-13a21.4	83	37.209
ENSSMAG00000016376	-	86	49.419	ENSSMAG00000012678	rab12	71	49.419
ENSSMAG00000016376	-	88	37.430	ENSSMAG00000001414	-	76	37.430
ENSSMAG00000016376	-	92	36.979	ENSSMAG00000020045	rab36	73	36.979
ENSSMAG00000016376	-	95	39.062	ENSSMAG00000009229	rab5aa	91	39.062
ENSSMAG00000016376	-	84	44.910	ENSSMAG00000003166	rab14	78	44.910
ENSSMAG00000016376	-	79	40.000	ENSSMAG00000004343	rab34a	60	40.000
ENSSMAG00000016376	-	85	40.571	ENSSMAG00000002229	zgc:101559	73	40.571
ENSSMAG00000016376	-	95	41.538	ENSSMAG00000011814	rab18b	93	41.538
ENSSMAG00000016376	-	97	38.942	ENSSMAG00000018454	-	97	38.942
ENSSMAG00000016376	-	100	67.633	ENSSMAG00000002569	-	100	67.633
ENSSMAG00000016376	-	77	35.714	ENSSMAG00000013303	rheb	83	35.714
ENSSMAG00000016376	-	95	35.450	ENSSMAG00000010140	rab22a	97	35.450
ENSSMAG00000016376	-	79	36.875	ENSSMAG00000019926	rab34b	68	36.875
ENSSMAG00000016376	-	79	44.937	ENSSMAG00000009722	rab25a	75	44.937
ENSSMAG00000016376	-	93	45.699	ENSSMAG00000004133	rab11a	87	45.699
ENSSMAG00000016376	-	82	46.341	ENSSMAG00000002969	rab18a	80	46.341
ENSSMAG00000016376	-	88	53.714	ENSSMAG00000019773	rab15	82	53.714
ENSSMAG00000016376	-	82	39.286	ENSSMAG00000014078	RAB9A	83	39.286
ENSSMAG00000016376	-	87	47.399	ENSSMAG00000018613	-	79	47.399
ENSSMAG00000016376	-	85	56.805	ENSSMAG00000017528	rab1ab	98	52.020
ENSSMAG00000016376	-	96	43.000	ENSSMAG00000016206	rab11al	93	43.000
ENSSMAG00000016376	-	97	53.030	ENSSMAG00000009201	rab1ba	98	53.030
ENSSMAG00000016376	-	87	40.571	ENSSMAG00000007323	rab5c	88	39.691
ENSSMAG00000016376	-	87	32.584	ENSSMAG00000014329	si:cabz01085950.1	87	32.584
ENSSMAG00000016376	-	85	47.059	ENSSMAG00000011769	si:dkey-16l2.16	81	45.055
ENSSMAG00000016376	-	96	34.896	ENSSMAG00000008745	hrasb	98	34.896
ENSSMAG00000016376	-	85	38.953	ENSSMAG00000015955	rab33ba	75	38.378
ENSSMAG00000016376	-	85	45.349	ENSSMAG00000001953	rab39bb	81	45.349
ENSSMAG00000016376	-	72	31.333	ENSSMAG00000008394	arl4d	74	31.333
ENSSMAG00000016376	-	86	47.368	ENSSMAG00000002500	rab30	85	47.368
ENSSMAG00000016376	-	96	35.533	ENSSMAG00000007370	kras	98	35.533
ENSSMAG00000016376	-	66	30.075	ENSSMAG00000006815	ARF6	86	30.075
ENSSMAG00000016376	-	100	52.239	ENSSMAG00000004416	-	94	52.239
ENSSMAG00000016376	-	92	40.860	ENSSMAG00000000335	rab6bb	89	40.860
ENSSMAG00000016376	-	84	35.294	ENSSMAG00000004806	si:ch73-116o1.2	81	35.294
ENSSMAG00000016376	-	82	38.690	ENSSMAG00000017426	rab9a	78	38.690
ENSSMAG00000016376	-	82	33.333	ENSSMAG00000004606	rabl2	72	33.333
ENSSMAG00000016376	-	88	33.898	ENSSMAG00000001964	rhebl1	93	33.898
ENSSMAG00000016376	-	87	47.977	ENSSMAG00000004922	rab11bb	79	47.977

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000016376	-	100	97.500	ENSAPOG00000001040	-	100	97.500	Acanthochromis_polyacanthus
ENSSMAG00000016376	-	100	67.164	ENSACIG00000003157	-	100	67.164	Amphilophus_citrinellus
ENSSMAG00000016376	-	100	97.500	ENSAOCG00000015908	-	100	97.500	Amphiprion_ocellaris
ENSSMAG00000016376	-	100	97.500	ENSAPEG00000004121	-	100	97.500	Amphiprion_percula
ENSSMAG00000016376	-	100	92.500	ENSATEG00000023662	-	100	92.500	Anabas_testudineus
ENSSMAG00000016376	-	100	95.000	ENSACLG00000019643	-	100	95.000	Astatotilapia_calliptera
ENSSMAG00000016376	-	100	92.000	ENSCVAG00000022649	-	100	92.000	Cyprinodon_variegatus
ENSSMAG00000016376	-	86	72.674	ENSDARG00000103934	megf8	99	72.674	Danio_rerio
ENSSMAG00000016376	-	100	90.500	ENSGAFG00000014787	-	100	90.500	Gambusia_affinis
ENSSMAG00000016376	-	100	95.000	ENSHBUG00000003728	-	100	95.000	Haplochromis_burtoni
ENSSMAG00000016376	-	100	95.000	ENSMZEG00005015817	-	100	95.000	Maylandia_zebra
ENSSMAG00000016376	-	100	94.500	ENSMMOG00000003924	-	100	94.500	Mola_mola
ENSSMAG00000016376	-	100	94.500	ENSMALG00000020807	-	100	94.500	Monopterus_albus
ENSSMAG00000016376	-	54	88.889	ENSOPRG00000014416	-	100	88.889	Ochotona_princeps
ENSSMAG00000016376	-	100	91.000	ENSORLG00000025395	-	100	91.000	Oryzias_latipes
ENSSMAG00000016376	-	100	91.000	ENSORLG00020009535	-	100	91.000	Oryzias_latipes_hni
ENSSMAG00000016376	-	100	91.500	ENSORLG00015015518	-	100	91.500	Oryzias_latipes_hsok
ENSSMAG00000016376	-	100	88.557	ENSPKIG00000014528	-	100	88.557	Paramormyrops_kingsleyae
ENSSMAG00000016376	-	100	92.000	ENSPFOG00000014418	-	100	92.000	Poecilia_formosa
ENSSMAG00000016376	-	100	92.000	ENSPLAG00000003181	-	100	92.000	Poecilia_latipinna
ENSSMAG00000016376	-	100	92.000	ENSPMEG00000008020	-	100	92.000	Poecilia_mexicana
ENSSMAG00000016376	-	100	92.000	ENSPMEG00000022988	-	100	92.000	Poecilia_mexicana
ENSSMAG00000016376	-	100	94.000	ENSPNYG00000004681	-	100	94.000	Pundamilia_nyererei
ENSSMAG00000016376	-	100	91.000	ENSSFOG00015021754	rab13	100	91.000	Scleropages_formosus
ENSSMAG00000016376	-	100	97.500	ENSSDUG00000006307	-	100	97.500	Seriola_dumerili
ENSSMAG00000016376	-	100	97.500	ENSSLDG00000015823	-	100	97.500	Seriola_lalandi_dorsalis
ENSSMAG00000016376	-	100	97.500	ENSSPAG00000022440	-	100	97.500	Stegastes_partitus
ENSSMAG00000016376	-	100	95.000	ENSTNIG00000018319	-	100	95.000	Tetraodon_nigroviridis
ENSSMAG00000016376	-	100	91.000	ENSXMAG00000016094	-	100	91.000	Xiphophorus_maculatus