EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000016460 (Gene tree)
Gene ID: -
Gene Symbol: utp20
Alias: im:7159098|wu:fb83c08
Full Name: UTP20 small subunit (SSU) processome component
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 21813 bases
Position: chr2:12541932-12563744
Accession: ZDB-GENE-080225-38
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000027104	DRIM	PF07539.12	7.7e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000027435	-	7704	-	ENSSMAP00000027104	2568 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000016460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000016460's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000016460	utp20	99	52.851	ENSG00000120800	UTP20	98	52.823	Homo_sapiens
ENSSMAG00000016460	utp20	100	79.752	ENSAPOG00000002429	utp20	98	79.570	Acanthochromis_polyacanthus
ENSSMAG00000016460	utp20	99	52.973	ENSAMEG00000016416	UTP20	98	52.950	Ailuropoda_melanoleuca
ENSSMAG00000016460	utp20	100	77.871	ENSACIG00000007987	utp20	98	77.697	Amphilophus_citrinellus
ENSSMAG00000016460	utp20	59	79.649	ENSAOCG00000015055	utp20	96	79.964	Amphiprion_ocellaris
ENSSMAG00000016460	utp20	100	80.264	ENSAPEG00000011605	utp20	98	80.490	Amphiprion_percula
ENSSMAG00000016460	utp20	100	83.743	ENSATEG00000005601	utp20	100	83.780	Anabas_testudineus
ENSSMAG00000016460	utp20	99	54.345	ENSAPLG00000015651	UTP20	98	53.924	Anas_platyrhynchos
ENSSMAG00000016460	utp20	99	53.142	ENSACAG00000011671	UTP20	98	53.150	Anolis_carolinensis
ENSSMAG00000016460	utp20	99	52.161	ENSANAG00000027152	UTP20	98	52.083	Aotus_nancymaae
ENSSMAG00000016460	utp20	100	77.507	ENSACLG00000008064	utp20	98	77.342	Astatotilapia_calliptera
ENSSMAG00000016460	utp20	100	64.812	ENSAMXG00000021039	utp20	98	64.448	Astyanax_mexicanus
ENSSMAG00000016460	utp20	99	53.988	ENSBTAG00000003239	UTP20	98	53.947	Bos_taurus
ENSSMAG00000016460	utp20	100	52.860	ENSCJAG00000001913	UTP20	98	52.800	Callithrix_jacchus
ENSSMAG00000016460	utp20	99	53.236	ENSCAFG00000006964	UTP20	98	53.289	Canis_familiaris
ENSSMAG00000016460	utp20	99	53.125	ENSCAFG00020024305	UTP20	98	53.178	Canis_lupus_dingo
ENSSMAG00000016460	utp20	99	53.710	ENSCHIG00000009221	UTP20	98	53.370	Capra_hircus
ENSSMAG00000016460	utp20	99	52.988	ENSTSYG00000003040	UTP20	98	53.115	Carlito_syrichta
ENSSMAG00000016460	utp20	99	50.182	ENSCAPG00000014920	UTP20	98	49.982	Cavia_aperea
ENSSMAG00000016460	utp20	100	52.013	ENSCPOG00000003129	UTP20	98	52.042	Cavia_porcellus
ENSSMAG00000016460	utp20	99	52.746	ENSCCAG00000031422	UTP20	98	52.729	Cebus_capucinus
ENSSMAG00000016460	utp20	99	51.215	ENSCATG00000035636	UTP20	98	50.892	Cercocebus_atys
ENSSMAG00000016460	utp20	100	53.176	ENSCLAG00000011569	UTP20	98	53.098	Chinchilla_lanigera
ENSSMAG00000016460	utp20	99	53.215	ENSCSAG00000003388	UTP20	98	53.066	Chlorocebus_sabaeus
ENSSMAG00000016460	utp20	88	71.212	ENSCHOG00000003532	UTP20	85	71.212	Choloepus_hoffmanni
ENSSMAG00000016460	utp20	95	54.149	ENSCPBG00000004844	UTP20	98	53.946	Chrysemys_picta_bellii
ENSSMAG00000016460	utp20	95	53.421	ENSCANG00000034768	UTP20	98	51.728	Colobus_angolensis_palliatus
ENSSMAG00000016460	utp20	99	52.586	ENSCGRG00001017151	Utp20	98	52.272	Cricetulus_griseus_chok1gshd
ENSSMAG00000016460	utp20	99	52.643	ENSCGRG00000008595	Utp20	98	52.329	Cricetulus_griseus_crigri
ENSSMAG00000016460	utp20	99	78.416	ENSCSEG00000014760	utp20	99	78.199	Cynoglossus_semilaevis
ENSSMAG00000016460	utp20	100	77.090	ENSCVAG00000001727	utp20	98	76.866	Cyprinodon_variegatus
ENSSMAG00000016460	utp20	100	63.469	ENSDARG00000099280	utp20	98	63.858	Danio_rerio
ENSSMAG00000016460	utp20	99	53.026	ENSDNOG00000016845	UTP20	98	52.781	Dasypus_novemcinctus
ENSSMAG00000016460	utp20	97	57.069	ENSDORG00000014762	Utp20	97	57.053	Dipodomys_ordii
ENSSMAG00000016460	utp20	89	74.820	ENSETEG00000019983	UTP20	87	74.820	Echinops_telfairi
ENSSMAG00000016460	utp20	99	53.171	ENSEASG00005019981	UTP20	98	53.188	Equus_asinus_asinus
ENSSMAG00000016460	utp20	99	53.208	ENSECAG00000006876	UTP20	98	53.224	Equus_caballus
ENSSMAG00000016460	utp20	74	62.500	ENSEEUG00000003774	UTP20	74	61.765	Erinaceus_europaeus
ENSSMAG00000016460	utp20	100	69.209	ENSELUG00000000798	utp20	98	69.267	Esox_lucius
ENSSMAG00000016460	utp20	99	53.447	ENSFCAG00000006150	UTP20	98	53.453	Felis_catus
ENSSMAG00000016460	utp20	94	53.303	ENSFALG00000011135	UTP20	98	52.887	Ficedula_albicollis
ENSSMAG00000016460	utp20	98	48.590	ENSFDAG00000007567	UTP20	95	63.158	Fukomys_damarensis
ENSSMAG00000016460	utp20	100	79.630	ENSFHEG00000004142	utp20	100	79.823	Fundulus_heteroclitus
ENSSMAG00000016460	utp20	99	63.541	ENSGMOG00000006762	utp20	98	64.031	Gadus_morhua
ENSSMAG00000016460	utp20	99	54.379	ENSGALG00000011643	UTP20	98	53.890	Gallus_gallus
ENSSMAG00000016460	utp20	99	76.662	ENSGAFG00000006986	utp20	100	76.700	Gambusia_affinis
ENSSMAG00000016460	utp20	99	74.393	ENSGACG00000019092	utp20	98	74.236	Gasterosteus_aculeatus
ENSSMAG00000016460	utp20	69	58.260	ENSGAGG00000011169	UTP20	93	57.871	Gopherus_agassizii
ENSSMAG00000016460	utp20	99	52.343	ENSGGOG00000004904	UTP20	98	52.277	Gorilla_gorilla
ENSSMAG00000016460	utp20	100	76.864	ENSHBUG00000010613	utp20	98	76.728	Haplochromis_burtoni
ENSSMAG00000016460	utp20	100	52.464	ENSHGLG00000006422	UTP20	98	52.586	Heterocephalus_glaber_female
ENSSMAG00000016460	utp20	100	51.161	ENSHGLG00100001086	UTP20	98	51.276	Heterocephalus_glaber_male
ENSSMAG00000016460	utp20	96	76.794	ENSHCOG00000005421	utp20	95	80.451	Hippocampus_comes
ENSSMAG00000016460	utp20	100	64.625	ENSIPUG00000013717	utp20	98	64.603	Ictalurus_punctatus
ENSSMAG00000016460	utp20	100	53.302	ENSSTOG00000015995	UTP20	98	53.362	Ictidomys_tridecemlineatus
ENSSMAG00000016460	utp20	99	52.735	ENSJJAG00000019321	Utp20	98	52.734	Jaculus_jaculus
ENSSMAG00000016460	utp20	100	79.293	ENSKMAG00000005972	utp20	98	79.593	Kryptolebias_marmoratus
ENSSMAG00000016460	utp20	100	81.828	ENSLBEG00000000781	utp20	100	81.859	Labrus_bergylta
ENSSMAG00000016460	utp20	79	56.872	ENSLACG00000010098	UTP20	99	56.872	Latimeria_chalumnae
ENSSMAG00000016460	utp20	92	62.557	ENSLOCG00000015197	utp20	80	62.557	Lepisosteus_oculatus
ENSSMAG00000016460	utp20	100	52.556	ENSLAFG00000012983	UTP20	98	52.700	Loxodonta_africana
ENSSMAG00000016460	utp20	99	52.854	ENSMFAG00000037766	UTP20	98	52.806	Macaca_fascicularis
ENSSMAG00000016460	utp20	99	52.926	ENSMMUG00000012891	UTP20	98	52.879	Macaca_mulatta
ENSSMAG00000016460	utp20	99	51.621	ENSMNEG00000037418	UTP20	98	51.403	Macaca_nemestrina
ENSSMAG00000016460	utp20	99	51.175	ENSMLEG00000029148	UTP20	98	51.035	Mandrillus_leucophaeus
ENSSMAG00000016460	utp20	100	79.032	ENSMAMG00000002063	utp20	98	78.996	Mastacembelus_armatus
ENSSMAG00000016460	utp20	100	78.744	ENSMZEG00005018123	utp20	98	78.590	Maylandia_zebra
ENSSMAG00000016460	utp20	99	53.780	ENSMGAG00000011726	UTP20	98	53.966	Meleagris_gallopavo
ENSSMAG00000016460	utp20	64	50.359	ENSMAUG00000011898	Utp20	99	50.303	Mesocricetus_auratus
ENSSMAG00000016460	utp20	99	51.126	ENSMICG00000015736	UTP20	98	51.022	Microcebus_murinus
ENSSMAG00000016460	utp20	99	51.991	ENSMOCG00000015242	Utp20	98	51.616	Microtus_ochrogaster
ENSSMAG00000016460	utp20	99	72.597	ENSMMOG00000003360	utp20	98	72.138	Mola_mola
ENSSMAG00000016460	utp20	99	52.850	ENSMODG00000003141	UTP20	98	52.777	Monodelphis_domestica
ENSSMAG00000016460	utp20	100	78.443	ENSMALG00000002723	utp20	98	78.443	Monopterus_albus
ENSSMAG00000016460	utp20	99	52.721	MGP_CAROLIEiJ_G0015713	Utp20	98	52.168	Mus_caroli
ENSSMAG00000016460	utp20	99	52.956	ENSMUSG00000004356	Utp20	98	52.346	Mus_musculus
ENSSMAG00000016460	utp20	99	52.552	MGP_PahariEiJ_G0031372	Utp20	98	52.206	Mus_pahari
ENSSMAG00000016460	utp20	99	52.740	MGP_SPRETEiJ_G0016531	Utp20	86	74.419	Mus_spretus
ENSSMAG00000016460	utp20	100	53.415	ENSMPUG00000011641	UTP20	98	53.399	Mustela_putorius_furo
ENSSMAG00000016460	utp20	99	53.073	ENSMLUG00000002313	UTP20	98	53.185	Myotis_lucifugus
ENSSMAG00000016460	utp20	99	52.756	ENSNGAG00000013738	Utp20	98	52.522	Nannospalax_galili
ENSSMAG00000016460	utp20	82	92.754	ENSNBRG00000019464	utp20	96	92.754	Neolamprologus_brichardi
ENSSMAG00000016460	utp20	99	52.731	ENSNLEG00000006166	UTP20	98	52.746	Nomascus_leucogenys
ENSSMAG00000016460	utp20	88	85.185	ENSMEUG00000015457	UTP20	85	85.185	Notamacropus_eugenii
ENSSMAG00000016460	utp20	85	76.433	ENSOPRG00000010546	UTP20	80	76.433	Ochotona_princeps
ENSSMAG00000016460	utp20	100	53.072	ENSODEG00000013411	UTP20	98	52.789	Octodon_degus
ENSSMAG00000016460	utp20	100	77.598	ENSONIG00000009910	utp20	98	77.678	Oreochromis_niloticus
ENSSMAG00000016460	utp20	99	53.494	ENSOANG00000005578	UTP20	98	53.365	Ornithorhynchus_anatinus
ENSSMAG00000016460	utp20	99	53.082	ENSOCUG00000010475	UTP20	98	53.277	Oryctolagus_cuniculus
ENSSMAG00000016460	utp20	99	74.571	ENSORLG00000008900	utp20	99	74.326	Oryzias_latipes
ENSSMAG00000016460	utp20	99	74.218	ENSORLG00020005879	utp20	99	74.116	Oryzias_latipes_hni
ENSSMAG00000016460	utp20	99	74.704	ENSORLG00015002843	utp20	99	74.458	Oryzias_latipes_hsok
ENSSMAG00000016460	utp20	100	79.692	ENSOMEG00000023583	utp20	100	79.540	Oryzias_melastigma
ENSSMAG00000016460	utp20	99	52.555	ENSOGAG00000015130	UTP20	98	52.601	Otolemur_garnettii
ENSSMAG00000016460	utp20	99	53.657	ENSOARG00000014722	UTP20	98	53.751	Ovis_aries
ENSSMAG00000016460	utp20	99	52.744	ENSPPAG00000001381	UTP20	98	52.716	Pan_paniscus
ENSSMAG00000016460	utp20	99	53.319	ENSPPRG00000001026	UTP20	98	53.489	Panthera_pardus
ENSSMAG00000016460	utp20	99	53.433	ENSPTIG00000020972	UTP20	98	53.489	Panthera_tigris_altaica
ENSSMAG00000016460	utp20	99	52.781	ENSPTRG00000005349	UTP20	98	52.716	Pan_troglodytes
ENSSMAG00000016460	utp20	99	52.888	ENSPANG00000020388	UTP20	98	52.806	Papio_anubis
ENSSMAG00000016460	utp20	100	63.083	ENSPKIG00000007196	utp20	98	63.037	Paramormyrops_kingsleyae
ENSSMAG00000016460	utp20	94	53.966	ENSPSIG00000016689	UTP20	98	53.894	Pelodiscus_sinensis
ENSSMAG00000016460	utp20	99	73.436	ENSPMGG00000004066	utp20	98	73.446	Periophthalmus_magnuspinnatus
ENSSMAG00000016460	utp20	99	53.112	ENSPEMG00000024120	Utp20	98	52.898	Peromyscus_maniculatus_bairdii
ENSSMAG00000016460	utp20	99	52.491	ENSPCIG00000009298	UTP20	98	52.481	Phascolarctos_cinereus
ENSSMAG00000016460	utp20	92	73.705	ENSPFOG00000003312	utp20	98	73.901	Poecilia_formosa
ENSSMAG00000016460	utp20	100	77.290	ENSPLAG00000012874	utp20	100	77.290	Poecilia_latipinna
ENSSMAG00000016460	utp20	100	76.663	ENSPMEG00000005915	utp20	100	76.891	Poecilia_mexicana
ENSSMAG00000016460	utp20	100	77.340	ENSPREG00000013285	utp20	100	77.576	Poecilia_reticulata
ENSSMAG00000016460	utp20	89	52.881	ENSPPYG00000004871	UTP20	99	52.898	Pongo_abelii
ENSSMAG00000016460	utp20	79	64.583	ENSPCAG00000012791	UTP20	79	72.222	Procavia_capensis
ENSSMAG00000016460	utp20	96	53.641	ENSPCOG00000024948	UTP20	98	53.537	Propithecus_coquereli
ENSSMAG00000016460	utp20	99	52.377	ENSPVAG00000008113	UTP20	98	52.169	Pteropus_vampyrus
ENSSMAG00000016460	utp20	100	76.784	ENSPNYG00000011561	utp20	98	76.373	Pundamilia_nyererei
ENSSMAG00000016460	utp20	100	64.438	ENSPNAG00000006176	utp20	98	64.527	Pygocentrus_nattereri
ENSSMAG00000016460	utp20	99	52.796	ENSRNOG00000005823	Utp20	98	52.329	Rattus_norvegicus
ENSSMAG00000016460	utp20	99	52.277	ENSRBIG00000025384	UTP20	98	51.791	Rhinopithecus_bieti
ENSSMAG00000016460	utp20	99	53.089	ENSRROG00000041254	UTP20	98	52.971	Rhinopithecus_roxellana
ENSSMAG00000016460	utp20	99	52.782	ENSSBOG00000035762	UTP20	98	52.635	Saimiri_boliviensis_boliviensis
ENSSMAG00000016460	utp20	99	52.155	ENSSHAG00000002298	UTP20	99	52.350	Sarcophilus_harrisii
ENSSMAG00000016460	utp20	99	64.510	ENSSFOG00015001674	utp20	98	64.547	Scleropages_formosus
ENSSMAG00000016460	utp20	100	82.781	ENSSDUG00000013730	utp20	98	82.721	Seriola_dumerili
ENSSMAG00000016460	utp20	100	82.709	ENSSLDG00000012844	utp20	98	82.715	Seriola_lalandi_dorsalis
ENSSMAG00000016460	utp20	57	85.185	ENSSARG00000002796	-	52	72.477	Sorex_araneus
ENSSMAG00000016460	utp20	99	54.193	ENSSPUG00000004513	UTP20	97	53.941	Sphenodon_punctatus
ENSSMAG00000016460	utp20	100	78.202	ENSSPAG00000014674	utp20	98	78.275	Stegastes_partitus
ENSSMAG00000016460	utp20	99	53.304	ENSSSCG00000000869	UTP20	98	53.216	Sus_scrofa
ENSSMAG00000016460	utp20	76	53.222	ENSTGUG00000009053	-	100	52.705	Taeniopygia_guttata
ENSSMAG00000016460	utp20	99	76.119	ENSTRUG00000005849	utp20	98	76.348	Takifugu_rubripes
ENSSMAG00000016460	utp20	99	74.829	ENSTNIG00000006921	utp20	98	72.740	Tetraodon_nigroviridis
ENSSMAG00000016460	utp20	88	51.451	ENSTBEG00000011917	UTP20	88	50.980	Tupaia_belangeri
ENSSMAG00000016460	utp20	97	53.997	ENSTTRG00000017195	UTP20	95	54.057	Tursiops_truncatus
ENSSMAG00000016460	utp20	99	52.928	ENSUAMG00000016363	UTP20	98	52.807	Ursus_americanus
ENSSMAG00000016460	utp20	99	52.422	ENSUMAG00000000077	UTP20	98	52.410	Ursus_maritimus
ENSSMAG00000016460	utp20	82	57.384	ENSVPAG00000011620	UTP20	90	56.649	Vicugna_pacos
ENSSMAG00000016460	utp20	99	53.195	ENSVVUG00000018110	UTP20	96	55.292	Vulpes_vulpes
ENSSMAG00000016460	utp20	99	53.774	ENSXETG00000032346	UTP20	99	53.899	Xenopus_tropicalis
ENSSMAG00000016460	utp20	100	78.274	ENSXMAG00000006503	utp20	100	78.198	Xiphophorus_maculatus