EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000016611 (Gene tree)
Gene ID: -
Gene Symbol: pop4
Alias: zgc:110597
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 12048 bases
Position: chr5:28904500-28916547
Accession: ZDB-GENE-050522-505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000027177	UPF0086	PF01868.16	6.3e-27	1	1
ENSSMAP00000027168	UPF0086	PF01868.16	6.9e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000027499	-	4612	-	ENSSMAP00000027168	223 (aa)	-	-
ENSSMAT00000027508	-	4585	-	ENSSMAP00000027177	214 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000016611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000016611's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000016611	pop4	95	63.902	ENSG00000105171	POP4	100	77.083	Homo_sapiens
ENSSMAG00000016611	pop4	99	60.190	ENSAMEG00000018329	-	93	60.664	Ailuropoda_melanoleuca
ENSSMAG00000016611	pop4	93	55.224	ENSAMEG00000003172	-	94	54.286	Ailuropoda_melanoleuca
ENSSMAG00000016611	pop4	99	78.281	ENSACIG00000008358	pop4	99	78.281	Amphilophus_citrinellus
ENSSMAG00000016611	pop4	94	85.075	ENSAOCG00000010116	pop4	98	85.075	Amphiprion_ocellaris
ENSSMAG00000016611	pop4	100	81.696	ENSAPEG00000002829	pop4	94	81.696	Amphiprion_percula
ENSSMAG00000016611	pop4	99	82.353	ENSATEG00000013028	pop4	99	82.353	Anabas_testudineus
ENSSMAG00000016611	pop4	95	61.084	ENSAPLG00000014051	POP4	97	61.084	Anas_platyrhynchos
ENSSMAG00000016611	pop4	95	64.390	ENSANAG00000020295	POP4	94	64.115	Aotus_nancymaae
ENSSMAG00000016611	pop4	100	77.578	ENSACLG00000000526	pop4	100	77.578	Astatotilapia_calliptera
ENSSMAG00000016611	pop4	100	69.955	ENSAMXG00000002899	pop4	100	69.955	Astyanax_mexicanus
ENSSMAG00000016611	pop4	99	62.559	ENSBTAG00000002223	POP4	94	63.462	Bos_taurus
ENSSMAG00000016611	pop4	95	62.927	ENSCJAG00000046750	POP4	95	69.186	Callithrix_jacchus
ENSSMAG00000016611	pop4	80	66.279	ENSCAFG00000007630	POP4	93	67.442	Canis_familiaris
ENSSMAG00000016611	pop4	99	61.611	ENSCHIG00000016743	POP4	93	62.559	Capra_hircus
ENSSMAG00000016611	pop4	99	62.085	ENSTSYG00000003488	POP4	93	62.621	Carlito_syrichta
ENSSMAG00000016611	pop4	99	45.972	ENSCAPG00000011105	POP4	93	46.445	Cavia_aperea
ENSSMAG00000016611	pop4	99	62.559	ENSCPOG00000002992	POP4	93	63.033	Cavia_porcellus
ENSSMAG00000016611	pop4	95	63.415	ENSCCAG00000020285	-	92	64.251	Cebus_capucinus
ENSSMAG00000016611	pop4	89	56.021	ENSCCAG00000034244	-	87	56.021	Cebus_capucinus
ENSSMAG00000016611	pop4	93	66.000	ENSCATG00000036022	POP4	100	78.125	Cercocebus_atys
ENSSMAG00000016611	pop4	99	62.085	ENSCLAG00000013162	POP4	93	63.033	Chinchilla_lanigera
ENSSMAG00000016611	pop4	93	64.824	ENSCSAG00000004868	POP4	90	65.327	Chlorocebus_sabaeus
ENSSMAG00000016611	pop4	99	45.498	ENSCHOG00000002071	POP4	94	45.972	Choloepus_hoffmanni
ENSSMAG00000016611	pop4	99	59.276	ENSCPBG00000016132	POP4	99	58.824	Chrysemys_picta_bellii
ENSSMAG00000016611	pop4	57	36.585	ENSCING00000023871	-	94	30.366	Ciona_intestinalis
ENSSMAG00000016611	pop4	93	64.824	ENSCANG00000005924	POP4	98	65.327	Colobus_angolensis_palliatus
ENSSMAG00000016611	pop4	99	63.033	ENSCGRG00001017185	Pop4	93	63.084	Cricetulus_griseus_chok1gshd
ENSSMAG00000016611	pop4	99	63.033	ENSCGRG00000008155	Pop4	93	63.084	Cricetulus_griseus_crigri
ENSSMAG00000016611	pop4	98	71.560	ENSCSEG00000002946	pop4	98	71.560	Cynoglossus_semilaevis
ENSSMAG00000016611	pop4	100	58.296	ENSCVAG00000018602	POP4	96	58.296	Cyprinodon_variegatus
ENSSMAG00000016611	pop4	99	68.778	ENSDARG00000101472	pop4	99	69.683	Danio_rerio
ENSSMAG00000016611	pop4	99	63.033	ENSDNOG00000047663	POP4	82	63.507	Dasypus_novemcinctus
ENSSMAG00000016611	pop4	77	55.488	ENSDORG00000008577	Pop4	92	57.317	Dipodomys_ordii
ENSSMAG00000016611	pop4	77	30.994	FBgn0035831	CG8038	83	30.994	Drosophila_melanogaster
ENSSMAG00000016611	pop4	92	52.792	ENSETEG00000003607	POP4	95	52.885	Echinops_telfairi
ENSSMAG00000016611	pop4	95	43.556	ENSEBUG00000010447	pop4	87	44.444	Eptatretus_burgeri
ENSSMAG00000016611	pop4	93	39.336	ENSEBUG00000004305	pop4	91	40.284	Eptatretus_burgeri
ENSSMAG00000016611	pop4	96	41.262	ENSEBUG00000008575	pop4	92	41.262	Eptatretus_burgeri
ENSSMAG00000016611	pop4	99	71.154	ENSECAG00000020206	POP4	77	71.154	Equus_caballus
ENSSMAG00000016611	pop4	93	47.236	ENSEEUG00000013109	POP4	99	47.739	Erinaceus_europaeus
ENSSMAG00000016611	pop4	99	66.063	ENSELUG00000019812	pop4	99	66.516	Esox_lucius
ENSSMAG00000016611	pop4	99	62.085	ENSFCAG00000001619	POP4	93	62.559	Felis_catus
ENSSMAG00000016611	pop4	99	58.962	ENSFALG00000000206	POP4	95	59.535	Ficedula_albicollis
ENSSMAG00000016611	pop4	99	61.137	ENSFDAG00000017859	POP4	93	61.611	Fukomys_damarensis
ENSSMAG00000016611	pop4	97	67.123	ENSFHEG00000012745	pop4	99	67.123	Fundulus_heteroclitus
ENSSMAG00000016611	pop4	91	71.649	ENSGMOG00000000335	pop4	98	70.352	Gadus_morhua
ENSSMAG00000016611	pop4	99	56.109	ENSGALG00000041972	POP4	92	56.561	Gallus_gallus
ENSSMAG00000016611	pop4	80	70.950	ENSGAFG00000003571	pop4	99	70.950	Gambusia_affinis
ENSSMAG00000016611	pop4	100	75.336	ENSGACG00000014510	pop4	98	82.222	Gasterosteus_aculeatus
ENSSMAG00000016611	pop4	99	60.181	ENSGAGG00000024544	POP4	79	60.181	Gopherus_agassizii
ENSSMAG00000016611	pop4	95	63.902	ENSGGOG00000038346	POP4	92	64.390	Gorilla_gorilla
ENSSMAG00000016611	pop4	100	77.578	ENSHBUG00000021821	pop4	100	77.578	Haplochromis_burtoni
ENSSMAG00000016611	pop4	99	61.611	ENSHGLG00000015798	POP4	93	62.085	Heterocephalus_glaber_female
ENSSMAG00000016611	pop4	99	61.611	ENSHGLG00100009737	POP4	93	62.085	Heterocephalus_glaber_male
ENSSMAG00000016611	pop4	100	73.543	ENSHCOG00000020937	pop4	100	73.543	Hippocampus_comes
ENSSMAG00000016611	pop4	99	66.063	ENSIPUG00000013652	pop4	99	66.063	Ictalurus_punctatus
ENSSMAG00000016611	pop4	99	62.559	ENSSTOG00000011016	POP4	93	63.033	Ictidomys_tridecemlineatus
ENSSMAG00000016611	pop4	99	60.190	ENSJJAG00000013376	Pop4	93	61.137	Jaculus_jaculus
ENSSMAG00000016611	pop4	100	82.063	ENSKMAG00000012250	pop4	100	82.063	Kryptolebias_marmoratus
ENSSMAG00000016611	pop4	100	72.197	ENSLBEG00000018846	-	100	72.197	Labrus_bergylta
ENSSMAG00000016611	pop4	100	72.646	ENSLBEG00000014139	pop4	100	72.646	Labrus_bergylta
ENSSMAG00000016611	pop4	98	55.963	ENSLACG00000008581	POP4	97	56.881	Latimeria_chalumnae
ENSSMAG00000016611	pop4	99	64.706	ENSLOCG00000005597	pop4	99	64.706	Lepisosteus_oculatus
ENSSMAG00000016611	pop4	99	62.085	ENSLAFG00000000084	POP4	95	61.792	Loxodonta_africana
ENSSMAG00000016611	pop4	93	64.824	ENSMFAG00000029606	POP4	90	65.327	Macaca_fascicularis
ENSSMAG00000016611	pop4	93	64.824	ENSMMUG00000017424	POP4	90	64.824	Macaca_mulatta
ENSSMAG00000016611	pop4	93	64.824	ENSMNEG00000031374	POP4	90	64.824	Macaca_nemestrina
ENSSMAG00000016611	pop4	93	64.824	ENSMLEG00000043454	POP4	90	66.000	Mandrillus_leucophaeus
ENSSMAG00000016611	pop4	99	82.353	ENSMAMG00000011716	pop4	99	82.353	Mastacembelus_armatus
ENSSMAG00000016611	pop4	100	77.578	ENSMZEG00005002360	pop4	100	77.578	Maylandia_zebra
ENSSMAG00000016611	pop4	95	59.606	ENSMGAG00000005337	POP4	95	57.944	Meleagris_gallopavo
ENSSMAG00000016611	pop4	99	63.033	ENSMAUG00000020110	Pop4	93	63.033	Mesocricetus_auratus
ENSSMAG00000016611	pop4	96	59.024	ENSMICG00000035730	POP4	92	61.244	Microcebus_murinus
ENSSMAG00000016611	pop4	99	77.828	ENSMMOG00000015321	pop4	99	78.281	Mola_mola
ENSSMAG00000016611	pop4	99	62.085	ENSMODG00000029406	POP4	90	63.158	Monodelphis_domestica
ENSSMAG00000016611	pop4	100	82.960	ENSMALG00000012571	pop4	100	84.305	Monopterus_albus
ENSSMAG00000016611	pop4	93	64.322	MGP_CAROLIEiJ_G0029600	Pop4	90	64.824	Mus_caroli
ENSSMAG00000016611	pop4	93	64.824	ENSMUSG00000030423	Pop4	90	64.824	Mus_musculus
ENSSMAG00000016611	pop4	93	63.819	MGP_SPRETEiJ_G0030699	Pop4	89	65.000	Mus_spretus
ENSSMAG00000016611	pop4	99	53.774	ENSMPUG00000008063	-	93	54.717	Mustela_putorius_furo
ENSSMAG00000016611	pop4	99	61.137	ENSMPUG00000008041	-	93	62.085	Mustela_putorius_furo
ENSSMAG00000016611	pop4	99	50.472	ENSMLUG00000010774	POP4	94	50.476	Myotis_lucifugus
ENSSMAG00000016611	pop4	58	68.000	ENSMEUG00000003636	-	100	68.000	Notamacropus_eugenii
ENSSMAG00000016611	pop4	93	63.317	ENSOPRG00000004736	POP4	99	64.824	Ochotona_princeps
ENSSMAG00000016611	pop4	99	62.085	ENSODEG00000013025	POP4	97	63.033	Octodon_degus
ENSSMAG00000016611	pop4	99	78.733	ENSONIG00000003458	pop4	97	78.733	Oreochromis_niloticus
ENSSMAG00000016611	pop4	93	64.322	ENSOCUG00000015974	POP4	90	64.824	Oryctolagus_cuniculus
ENSSMAG00000016611	pop4	99	73.303	ENSORLG00000020317	pop4	99	73.303	Oryzias_latipes
ENSSMAG00000016611	pop4	100	72.646	ENSORLG00015011624	pop4	100	72.646	Oryzias_latipes_hsok
ENSSMAG00000016611	pop4	100	74.439	ENSOMEG00000002538	pop4	100	74.439	Oryzias_melastigma
ENSSMAG00000016611	pop4	96	61.463	ENSOGAG00000011168	POP4	94	63.810	Otolemur_garnettii
ENSSMAG00000016611	pop4	99	62.559	ENSOARG00000004041	POP4	93	63.507	Ovis_aries
ENSSMAG00000016611	pop4	95	63.902	ENSPPAG00000040372	POP4	92	64.390	Pan_paniscus
ENSSMAG00000016611	pop4	99	62.085	ENSPPRG00000010502	POP4	93	62.559	Panthera_pardus
ENSSMAG00000016611	pop4	99	62.085	ENSPTIG00000016598	POP4	93	62.559	Panthera_tigris_altaica
ENSSMAG00000016611	pop4	95	63.902	ENSPTRG00000010779	POP4	92	64.390	Pan_troglodytes
ENSSMAG00000016611	pop4	93	64.824	ENSPANG00000008546	POP4	90	65.327	Papio_anubis
ENSSMAG00000016611	pop4	95	66.010	ENSPKIG00000004468	pop4	89	66.337	Paramormyrops_kingsleyae
ENSSMAG00000016611	pop4	98	60.550	ENSPSIG00000015690	POP4	99	63.184	Pelodiscus_sinensis
ENSSMAG00000016611	pop4	94	64.216	ENSPMGG00000008608	pop4	99	66.019	Periophthalmus_magnuspinnatus
ENSSMAG00000016611	pop4	99	54.028	ENSPEMG00000019982	-	93	54.502	Peromyscus_maniculatus_bairdii
ENSSMAG00000016611	pop4	99	63.033	ENSPEMG00000014034	-	93	64.078	Peromyscus_maniculatus_bairdii
ENSSMAG00000016611	pop4	68	64.138	ENSPMAG00000006265	pop4	96	55.263	Petromyzon_marinus
ENSSMAG00000016611	pop4	99	62.085	ENSPCIG00000024738	POP4	90	62.201	Phascolarctos_cinereus
ENSSMAG00000016611	pop4	100	71.749	ENSPFOG00000000925	pop4	100	71.749	Poecilia_formosa
ENSSMAG00000016611	pop4	100	72.646	ENSPLAG00000003161	pop4	100	72.646	Poecilia_latipinna
ENSSMAG00000016611	pop4	100	71.749	ENSPMEG00000002475	pop4	100	71.749	Poecilia_mexicana
ENSSMAG00000016611	pop4	99	71.493	ENSPREG00000022403	pop4	93	71.493	Poecilia_reticulata
ENSSMAG00000016611	pop4	95	64.390	ENSPPYG00000009805	POP4	92	64.878	Pongo_abelii
ENSSMAG00000016611	pop4	93	62.814	ENSPCAG00000007737	POP4	90	63.317	Procavia_capensis
ENSSMAG00000016611	pop4	99	59.716	ENSPCOG00000018055	POP4	94	60.577	Propithecus_coquereli
ENSSMAG00000016611	pop4	99	61.502	ENSPVAG00000006069	POP4	94	61.611	Pteropus_vampyrus
ENSSMAG00000016611	pop4	100	77.578	ENSPNYG00000020038	pop4	100	77.578	Pundamilia_nyererei
ENSSMAG00000016611	pop4	99	67.421	ENSPNAG00000005591	pop4	99	67.421	Pygocentrus_nattereri
ENSSMAG00000016611	pop4	93	63.317	ENSRNOG00000027646	Pop4	90	63.819	Rattus_norvegicus
ENSSMAG00000016611	pop4	73	59.615	ENSRBIG00000044769	POP4	82	66.667	Rhinopithecus_bieti
ENSSMAG00000016611	pop4	93	64.824	ENSRROG00000028903	POP4	90	65.327	Rhinopithecus_roxellana
ENSSMAG00000016611	pop4	63	34.899	YBR257W	-	52	34.899	Saccharomyces_cerevisiae
ENSSMAG00000016611	pop4	95	64.563	ENSSBOG00000032445	POP4	92	64.563	Saimiri_boliviensis_boliviensis
ENSSMAG00000016611	pop4	99	61.137	ENSSHAG00000016888	POP4	94	61.244	Sarcophilus_harrisii
ENSSMAG00000016611	pop4	98	64.679	ENSSFOG00015014556	pop4	96	64.679	Scleropages_formosus
ENSSMAG00000016611	pop4	100	84.375	ENSSDUG00000019865	pop4	90	84.375	Seriola_dumerili
ENSSMAG00000016611	pop4	100	83.482	ENSSLDG00000001763	pop4	100	83.482	Seriola_lalandi_dorsalis
ENSSMAG00000016611	pop4	93	63.819	ENSSARG00000004748	POP4	95	63.158	Sorex_araneus
ENSSMAG00000016611	pop4	100	84.821	ENSSPAG00000014364	pop4	100	84.821	Stegastes_partitus
ENSSMAG00000016611	pop4	99	62.559	ENSSSCG00000002854	POP4	94	62.019	Sus_scrofa
ENSSMAG00000016611	pop4	94	60.199	ENSTGUG00000008953	POP4	99	61.194	Taeniopygia_guttata
ENSSMAG00000016611	pop4	95	75.862	ENSTNIG00000006401	pop4	100	75.490	Tetraodon_nigroviridis
ENSSMAG00000016611	pop4	99	62.559	ENSTBEG00000002194	POP4	93	63.033	Tupaia_belangeri
ENSSMAG00000016611	pop4	99	63.033	ENSTTRG00000005882	POP4	93	63.033	Tursiops_truncatus
ENSSMAG00000016611	pop4	99	60.190	ENSUAMG00000003049	-	93	60.664	Ursus_americanus
ENSSMAG00000016611	pop4	99	60.190	ENSUMAG00000007522	-	93	60.664	Ursus_maritimus
ENSSMAG00000016611	pop4	93	61.809	ENSVVUG00000016876	-	69	62.814	Vulpes_vulpes
ENSSMAG00000016611	pop4	97	57.971	ENSXETG00000017598	pop4	96	57.009	Xenopus_tropicalis
ENSSMAG00000016611	pop4	99	72.973	ENSXCOG00000017695	pop4	93	72.973	Xiphophorus_couchianus
ENSSMAG00000016611	pop4	99	72.973	ENSXMAG00000013862	pop4	93	72.973	Xiphophorus_maculatus