EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000016770 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-275j6.5
Alias: gb:ct586343
Full Name: si:ch211-275j6.5
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 2302 bases
Position: chr9:13594566-13596867
Accession: ZDB-GENE-130109-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000027410	RF-1	PF00472.20	1.7e-21	1	1
ENSSMAP00000027425	RF-1	PF00472.20	1.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000027763	-	1917	-	ENSSMAP00000027425	171 (aa)	-	-
ENSSMAT00000027748	-	2028	-	ENSSMAP00000027410	169 (aa)	-	A0A2U9BSJ1

Gene Model

Click here to download ENSSMAG00000016770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000016770's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000016770	si:ch211-275j6.5	68	65.812	ENSG00000130921	C12orf65	76	64.286	Homo_sapiens
ENSSMAG00000016770	si:ch211-275j6.5	92	81.290	ENSAPOG00000000995	si:ch211-275j6.5	94	81.290	Acanthochromis_polyacanthus
ENSSMAG00000016770	si:ch211-275j6.5	59	57.265	ENSAMEG00000015144	C12orf65	71	65.487	Ailuropoda_melanoleuca
ENSSMAG00000016770	si:ch211-275j6.5	92	81.290	ENSACIG00000001644	si:ch211-275j6.5	97	81.290	Amphilophus_citrinellus
ENSSMAG00000016770	si:ch211-275j6.5	92	82.581	ENSAOCG00000005589	si:ch211-275j6.5	97	80.645	Amphiprion_ocellaris
ENSSMAG00000016770	si:ch211-275j6.5	92	81.935	ENSAPEG00000024618	si:ch211-275j6.5	94	80.000	Amphiprion_percula
ENSSMAG00000016770	si:ch211-275j6.5	99	75.000	ENSATEG00000011661	si:ch211-275j6.5	90	75.000	Anabas_testudineus
ENSSMAG00000016770	si:ch211-275j6.5	71	67.500	ENSAPLG00000016073	C12orf65	100	67.500	Anas_platyrhynchos
ENSSMAG00000016770	si:ch211-275j6.5	86	64.138	ENSACAG00000015561	C12orf65	71	62.069	Anolis_carolinensis
ENSSMAG00000016770	si:ch211-275j6.5	57	68.687	ENSANAG00000022881	C12orf65	76	64.286	Aotus_nancymaae
ENSSMAG00000016770	si:ch211-275j6.5	92	80.892	ENSACLG00000023906	si:ch211-275j6.5	80	90.000	Astatotilapia_calliptera
ENSSMAG00000016770	si:ch211-275j6.5	76	71.318	ENSAMXG00000031765	si:ch211-275j6.5	76	72.581	Astyanax_mexicanus
ENSSMAG00000016770	si:ch211-275j6.5	75	65.116	ENSBTAG00000020503	C17H12orf65	69	67.227	Bos_taurus
ENSSMAG00000016770	si:ch211-275j6.5	64	62.037	ENSCJAG00000016579	C12orf65	74	65.289	Callithrix_jacchus
ENSSMAG00000016770	si:ch211-275j6.5	83	56.738	ENSCAFG00000007512	C26H12orf65	50	67.227	Canis_familiaris
ENSSMAG00000016770	si:ch211-275j6.5	72	62.810	ENSCAFG00020016169	C12orf65	90	55.556	Canis_lupus_dingo
ENSSMAG00000016770	si:ch211-275j6.5	75	66.667	ENSCHIG00000022229	C12orf65	67	68.908	Capra_hircus
ENSSMAG00000016770	si:ch211-275j6.5	58	66.327	ENSCAPG00000014691	C12orf65	62	66.667	Cavia_aperea
ENSSMAG00000016770	si:ch211-275j6.5	59	65.347	ENSCPOG00000007583	C12orf65	62	66.667	Cavia_porcellus
ENSSMAG00000016770	si:ch211-275j6.5	68	65.812	ENSCATG00000040685	C12orf65	76	64.286	Cercocebus_atys
ENSSMAG00000016770	si:ch211-275j6.5	60	63.107	ENSCLAG00000014329	C12orf65	64	63.866	Chinchilla_lanigera
ENSSMAG00000016770	si:ch211-275j6.5	68	65.812	ENSCSAG00000002068	C12orf65	75	64.286	Chlorocebus_sabaeus
ENSSMAG00000016770	si:ch211-275j6.5	88	56.000	ENSCPBG00000025970	C12orf65	74	62.810	Chrysemys_picta_bellii
ENSSMAG00000016770	si:ch211-275j6.5	57	66.327	ENSCGRG00001013424	2810006K23Rik	67	63.115	Cricetulus_griseus_chok1gshd
ENSSMAG00000016770	si:ch211-275j6.5	57	66.327	ENSCGRG00000003037	2810006K23Rik	67	63.115	Cricetulus_griseus_crigri
ENSSMAG00000016770	si:ch211-275j6.5	100	64.706	ENSCSEG00000014536	si:ch211-275j6.5	100	63.529	Cynoglossus_semilaevis
ENSSMAG00000016770	si:ch211-275j6.5	98	69.880	ENSCVAG00000023000	si:ch211-275j6.5	96	69.880	Cyprinodon_variegatus
ENSSMAG00000016770	si:ch211-275j6.5	91	60.736	ENSDARG00000097803	si:ch211-275j6.5	91	71.429	Danio_rerio
ENSSMAG00000016770	si:ch211-275j6.5	61	60.000	ENSDNOG00000034728	C12orf65	72	59.664	Dasypus_novemcinctus
ENSSMAG00000016770	si:ch211-275j6.5	78	56.391	ENSDORG00000026069	2810006K23Rik	86	53.459	Dipodomys_ordii
ENSSMAG00000016770	si:ch211-275j6.5	72	47.934	FBgn0050100	CG30100	70	50.485	Drosophila_melanogaster
ENSSMAG00000016770	si:ch211-275j6.5	52	71.591	ENSETEG00000005627	C12orf65	78	63.200	Echinops_telfairi
ENSSMAG00000016770	si:ch211-275j6.5	54	72.527	ENSEASG00005012587	C12orf65	72	68.908	Equus_asinus_asinus
ENSSMAG00000016770	si:ch211-275j6.5	53	73.333	ENSECAG00000001057	C8H12orf65	72	68.908	Equus_caballus
ENSSMAG00000016770	si:ch211-275j6.5	69	62.931	ENSEEUG00000007231	C12orf65	71	65.546	Erinaceus_europaeus
ENSSMAG00000016770	si:ch211-275j6.5	96	65.644	ENSELUG00000015178	lg13h12orf65	95	67.089	Esox_lucius
ENSSMAG00000016770	si:ch211-275j6.5	73	56.349	ENSFCAG00000015328	C12orf65	90	54.194	Felis_catus
ENSSMAG00000016770	si:ch211-275j6.5	59	71.000	ENSFALG00000009261	C12orf65	76	64.754	Ficedula_albicollis
ENSSMAG00000016770	si:ch211-275j6.5	100	72.781	ENSFHEG00000017567	si:ch211-275j6.5	100	72.781	Fundulus_heteroclitus
ENSSMAG00000016770	si:ch211-275j6.5	82	71.942	ENSGMOG00000012139	si:ch211-275j6.5	82	78.512	Gadus_morhua
ENSSMAG00000016770	si:ch211-275j6.5	83	59.574	ENSGALG00000029390	C15H12ORF65	85	58.865	Gallus_gallus
ENSSMAG00000016770	si:ch211-275j6.5	94	75.472	ENSGACG00000008255	si:ch211-275j6.5	100	75.472	Gasterosteus_aculeatus
ENSSMAG00000016770	si:ch211-275j6.5	66	59.649	ENSGAGG00000000823	C12orf65	69	66.337	Gopherus_agassizii
ENSSMAG00000016770	si:ch211-275j6.5	68	65.812	ENSGGOG00000012850	C12orf65	76	64.286	Gorilla_gorilla
ENSSMAG00000016770	si:ch211-275j6.5	92	80.892	ENSHBUG00000007273	si:ch211-275j6.5	80	90.000	Haplochromis_burtoni
ENSSMAG00000016770	si:ch211-275j6.5	56	67.708	ENSHGLG00000010966	C12orf65	64	65.546	Heterocephalus_glaber_female
ENSSMAG00000016770	si:ch211-275j6.5	56	67.708	ENSHGLG00100018631	C12orf65	64	65.546	Heterocephalus_glaber_male
ENSSMAG00000016770	si:ch211-275j6.5	94	63.473	ENSHCOG00000019848	si:ch211-275j6.5	98	63.473	Hippocampus_comes
ENSSMAG00000016770	si:ch211-275j6.5	80	68.382	ENSIPUG00000020793	si:ch211-275j6.5	75	72.358	Ictalurus_punctatus
ENSSMAG00000016770	si:ch211-275j6.5	85	55.102	ENSSTOG00000016463	C12orf65	94	51.724	Ictidomys_tridecemlineatus
ENSSMAG00000016770	si:ch211-275j6.5	75	60.465	ENSJJAG00000023360	2810006K23Rik	61	64.035	Jaculus_jaculus
ENSSMAG00000016770	si:ch211-275j6.5	93	75.949	ENSKMAG00000018733	si:ch211-275j6.5	98	75.949	Kryptolebias_marmoratus
ENSSMAG00000016770	si:ch211-275j6.5	71	69.167	ENSLACG00000017355	C12orf65	73	69.167	Latimeria_chalumnae
ENSSMAG00000016770	si:ch211-275j6.5	70	68.908	ENSLOCG00000005702	si:ch211-275j6.5	98	68.908	Lepisosteus_oculatus
ENSSMAG00000016770	si:ch211-275j6.5	70	65.254	ENSLAFG00000002134	C12orf65	71	65.254	Loxodonta_africana
ENSSMAG00000016770	si:ch211-275j6.5	68	65.812	ENSMMUG00000031495	C12orf65	76	64.286	Macaca_mulatta
ENSSMAG00000016770	si:ch211-275j6.5	57	69.697	ENSMNEG00000044673	C12orf65	76	65.079	Macaca_nemestrina
ENSSMAG00000016770	si:ch211-275j6.5	68	65.812	ENSMLEG00000044309	C12orf65	76	64.286	Mandrillus_leucophaeus
ENSSMAG00000016770	si:ch211-275j6.5	100	82.249	ENSMAMG00000017366	si:ch211-275j6.5	100	82.249	Mastacembelus_armatus
ENSSMAG00000016770	si:ch211-275j6.5	92	80.892	ENSMZEG00005000938	si:ch211-275j6.5	80	90.000	Maylandia_zebra
ENSSMAG00000016770	si:ch211-275j6.5	91	57.419	ENSMGAG00000003354	C12orf65	93	62.698	Meleagris_gallopavo
ENSSMAG00000016770	si:ch211-275j6.5	54	67.742	ENSMAUG00000010304	2810006K23Rik	63	73.418	Mesocricetus_auratus
ENSSMAG00000016770	si:ch211-275j6.5	58	69.000	ENSMICG00000037138	C12orf65	72	67.227	Microcebus_murinus
ENSSMAG00000016770	si:ch211-275j6.5	61	64.762	ENSMOCG00000017477	2810006K23Rik	73	59.259	Microtus_ochrogaster
ENSSMAG00000016770	si:ch211-275j6.5	100	74.706	ENSMMOG00000017134	si:ch211-275j6.5	100	73.529	Mola_mola
ENSSMAG00000016770	si:ch211-275j6.5	70	62.185	ENSMODG00000012450	C12orf65	69	62.185	Monodelphis_domestica
ENSSMAG00000016770	si:ch211-275j6.5	100	82.249	ENSMALG00000012291	si:ch211-275j6.5	100	82.249	Monopterus_albus
ENSSMAG00000016770	si:ch211-275j6.5	57	67.347	MGP_CAROLIEiJ_G0027747	2810006K23Rik	64	65.812	Mus_caroli
ENSSMAG00000016770	si:ch211-275j6.5	57	67.347	ENSMUSG00000047635	2810006K23Rik	64	65.812	Mus_musculus
ENSSMAG00000016770	si:ch211-275j6.5	57	66.327	MGP_SPRETEiJ_G0028745	2810006K23Rik	64	64.957	Mus_spretus
ENSSMAG00000016770	si:ch211-275j6.5	80	57.447	ENSMPUG00000001679	C12orf65	90	54.430	Mustela_putorius_furo
ENSSMAG00000016770	si:ch211-275j6.5	91	52.903	ENSMLUG00000007001	C12orf65	91	51.299	Myotis_lucifugus
ENSSMAG00000016770	si:ch211-275j6.5	75	63.281	ENSNGAG00000010625	2810006K23Rik	66	66.102	Nannospalax_galili
ENSSMAG00000016770	si:ch211-275j6.5	92	80.255	ENSNBRG00000008082	si:ch211-275j6.5	96	78.616	Neolamprologus_brichardi
ENSSMAG00000016770	si:ch211-275j6.5	68	65.812	ENSNLEG00000001470	C12orf65	76	64.286	Nomascus_leucogenys
ENSSMAG00000016770	si:ch211-275j6.5	92	55.414	ENSMEUG00000009430	C12orf65	73	66.667	Notamacropus_eugenii
ENSSMAG00000016770	si:ch211-275j6.5	92	51.282	ENSOPRG00000011029	C12orf65	94	49.383	Ochotona_princeps
ENSSMAG00000016770	si:ch211-275j6.5	73	61.789	ENSODEG00000011382	-	66	64.035	Octodon_degus
ENSSMAG00000016770	si:ch211-275j6.5	96	71.856	ENSONIG00000013298	si:ch211-275j6.5	77	89.062	Oreochromis_niloticus
ENSSMAG00000016770	si:ch211-275j6.5	81	59.854	ENSOANG00000012866	C12orf65	66	68.421	Ornithorhynchus_anatinus
ENSSMAG00000016770	si:ch211-275j6.5	63	60.185	ENSOCUG00000011888	C12orf65	62	69.663	Oryctolagus_cuniculus
ENSSMAG00000016770	si:ch211-275j6.5	91	78.431	ENSORLG00000006153	si:ch211-275j6.5	91	78.431	Oryzias_latipes
ENSSMAG00000016770	si:ch211-275j6.5	91	77.778	ENSORLG00020017188	si:ch211-275j6.5	91	77.778	Oryzias_latipes_hni
ENSSMAG00000016770	si:ch211-275j6.5	91	78.431	ENSORLG00015005780	c9h12orf65	91	78.431	Oryzias_latipes_hsok
ENSSMAG00000016770	si:ch211-275j6.5	92	75.641	ENSOMEG00000001663	si:ch211-275j6.5	93	75.641	Oryzias_melastigma
ENSSMAG00000016770	si:ch211-275j6.5	75	52.344	ENSOGAG00000010778	C12orf65	93	52.174	Otolemur_garnettii
ENSSMAG00000016770	si:ch211-275j6.5	75	65.116	ENSOARG00000005214	C12orf65	70	67.227	Ovis_aries
ENSSMAG00000016770	si:ch211-275j6.5	68	65.812	ENSPPAG00000029654	C12orf65	76	64.286	Pan_paniscus
ENSSMAG00000016770	si:ch211-275j6.5	91	56.410	ENSPPRG00000024772	C12orf65	90	55.484	Panthera_pardus
ENSSMAG00000016770	si:ch211-275j6.5	91	56.410	ENSPTIG00000011744	C12orf65	90	55.484	Panthera_tigris_altaica
ENSSMAG00000016770	si:ch211-275j6.5	68	66.667	ENSPTRG00000005595	C12H12orf65	76	65.079	Pan_troglodytes
ENSSMAG00000016770	si:ch211-275j6.5	68	65.812	ENSPANG00000015388	C12orf65	76	64.286	Papio_anubis
ENSSMAG00000016770	si:ch211-275j6.5	83	70.000	ENSPKIG00000001571	si:ch211-275j6.5	77	72.308	Paramormyrops_kingsleyae
ENSSMAG00000016770	si:ch211-275j6.5	88	57.333	ENSPSIG00000013010	C12orf65	68	64.463	Pelodiscus_sinensis
ENSSMAG00000016770	si:ch211-275j6.5	80	71.852	ENSPMGG00000018342	si:ch211-275j6.5	73	75.610	Periophthalmus_magnuspinnatus
ENSSMAG00000016770	si:ch211-275j6.5	60	60.784	ENSPMAG00000000514	si:ch211-275j6.5	92	60.784	Petromyzon_marinus
ENSSMAG00000016770	si:ch211-275j6.5	96	52.121	ENSPCIG00000010996	C12orf65	64	65.455	Phascolarctos_cinereus
ENSSMAG00000016770	si:ch211-275j6.5	99	72.619	ENSPLAG00000001661	si:ch211-275j6.5	99	72.619	Poecilia_latipinna
ENSSMAG00000016770	si:ch211-275j6.5	99	72.619	ENSPMEG00000009201	si:ch211-275j6.5	100	72.619	Poecilia_mexicana
ENSSMAG00000016770	si:ch211-275j6.5	99	72.619	ENSPMEG00000018566	si:ch211-275j6.5	100	72.619	Poecilia_mexicana
ENSSMAG00000016770	si:ch211-275j6.5	99	72.024	ENSPREG00000021268	si:ch211-275j6.5	99	72.024	Poecilia_reticulata
ENSSMAG00000016770	si:ch211-275j6.5	68	65.812	ENSPPYG00000005082	C12orf65	76	64.286	Pongo_abelii
ENSSMAG00000016770	si:ch211-275j6.5	67	53.906	ENSPCAG00000016193	C12orf65	77	62.016	Procavia_capensis
ENSSMAG00000016770	si:ch211-275j6.5	58	69.000	ENSPCOG00000021574	C12orf65	73	64.885	Propithecus_coquereli
ENSSMAG00000016770	si:ch211-275j6.5	91	57.051	ENSPVAG00000015301	C12orf65	90	56.129	Pteropus_vampyrus
ENSSMAG00000016770	si:ch211-275j6.5	92	80.892	ENSPNYG00000014456	si:ch211-275j6.5	80	90.000	Pundamilia_nyererei
ENSSMAG00000016770	si:ch211-275j6.5	98	59.880	ENSPNAG00000019769	si:ch211-275j6.5	76	70.543	Pygocentrus_nattereri
ENSSMAG00000016770	si:ch211-275j6.5	57	68.367	ENSRNOG00000001073	RGD1563482	68	65.041	Rattus_norvegicus
ENSSMAG00000016770	si:ch211-275j6.5	65	66.364	ENSRBIG00000040789	C12orf65	76	64.286	Rhinopithecus_bieti
ENSSMAG00000016770	si:ch211-275j6.5	65	65.455	ENSRROG00000031384	C12orf65	75	63.492	Rhinopithecus_roxellana
ENSSMAG00000016770	si:ch211-275j6.5	57	69.697	ENSSBOG00000026629	C12orf65	78	62.879	Saimiri_boliviensis_boliviensis
ENSSMAG00000016770	si:ch211-275j6.5	65	69.091	ENSSHAG00000014988	C12orf65	62	66.964	Sarcophilus_harrisii
ENSSMAG00000016770	si:ch211-275j6.5	96	59.770	ENSSFOG00015019122	si:ch211-275j6.5	73	71.654	Scleropages_formosus
ENSSMAG00000016770	si:ch211-275j6.5	88	81.935	ENSSDUG00000020401	si:ch211-275j6.5	98	81.935	Seriola_dumerili
ENSSMAG00000016770	si:ch211-275j6.5	100	84.024	ENSSLDG00000017638	si:ch211-275j6.5	100	84.024	Seriola_lalandi_dorsalis
ENSSMAG00000016770	si:ch211-275j6.5	72	66.942	ENSSPUG00000012613	C12orf65	74	66.942	Sphenodon_punctatus
ENSSMAG00000016770	si:ch211-275j6.5	100	76.331	ENSSPAG00000023476	si:ch211-275j6.5	100	76.331	Stegastes_partitus
ENSSMAG00000016770	si:ch211-275j6.5	83	54.795	ENSSSCG00000009774	C12orf65	96	51.370	Sus_scrofa
ENSSMAG00000016770	si:ch211-275j6.5	71	63.333	ENSTGUG00000005440	C12orf65	94	63.333	Taeniopygia_guttata
ENSSMAG00000016770	si:ch211-275j6.5	100	73.964	ENSTNIG00000015832	si:ch211-275j6.5	100	73.964	Tetraodon_nigroviridis
ENSSMAG00000016770	si:ch211-275j6.5	57	69.697	ENSTBEG00000012500	C12orf65	76	66.142	Tupaia_belangeri
ENSSMAG00000016770	si:ch211-275j6.5	65	66.364	ENSTTRG00000015880	C12orf65	70	67.241	Tursiops_truncatus
ENSSMAG00000016770	si:ch211-275j6.5	71	58.871	ENSUAMG00000019669	C12orf65	92	56.863	Ursus_americanus
ENSSMAG00000016770	si:ch211-275j6.5	71	58.871	ENSUMAG00000004025	C12orf65	72	66.387	Ursus_maritimus
ENSSMAG00000016770	si:ch211-275j6.5	72	62.810	ENSVVUG00000027811	C12orf65	72	67.227	Vulpes_vulpes
ENSSMAG00000016770	si:ch211-275j6.5	99	73.214	ENSXCOG00000000975	si:ch211-275j6.5	99	73.214	Xiphophorus_couchianus