EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000016922 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 14842 bases
Position: chr9:24413769-24428610
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000027688	PARP	PF00644.20	2.8e-31	1	1
ENSSMAP00000027767	PARP	PF00644.20	1.6e-29	1	1
ENSSMAP00000027754	PARP	PF00644.20	3.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000028110	-	1164	-	ENSSMAP00000027767	387 (aa)	-	-
ENSSMAT00000028031	-	6190	-	ENSSMAP00000027688	1891 (aa)	-	-
ENSSMAT00000028097	-	4956	-	ENSSMAP00000027754	1651 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000016922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000016922's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000016922	-	50	35.514	ENSSMAG00000001220	PARP11	79	34.137
ENSSMAG00000016922	-	65	43.318	ENSSMAG00000007826	-	53	43.318
ENSSMAG00000016922	-	54	36.574	ENSSMAG00000020545	-	50	33.445
ENSSMAG00000016922	-	99	51.181	ENSSMAG00000003869	si:ch211-219a4.3	99	40.583

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000016922	-	95	63.798	ENSAPOG00000002274	-	99	63.924	Acanthochromis_polyacanthus
ENSSMAG00000016922	-	81	65.924	ENSACIG00000014929	-	93	73.684	Amphilophus_citrinellus
ENSSMAG00000016922	-	69	44.403	ENSACIG00000005931	-	72	73.118	Amphilophus_citrinellus
ENSSMAG00000016922	-	100	74.490	ENSAOCG00000020608	-	94	72.362	Amphiprion_ocellaris
ENSSMAG00000016922	-	50	75.000	ENSAPEG00000022069	-	100	67.171	Amphiprion_percula
ENSSMAG00000016922	-	50	74.490	ENSATEG00000012173	-	98	67.561	Anabas_testudineus
ENSSMAG00000016922	-	50	72.959	ENSACLG00000005600	-	100	69.591	Astatotilapia_calliptera
ENSSMAG00000016922	-	52	68.657	ENSACLG00000005627	-	99	65.544	Astatotilapia_calliptera
ENSSMAG00000016922	-	81	63.918	ENSAMXG00000010091	-	99	52.028	Astyanax_mexicanus
ENSSMAG00000016922	-	81	49.565	ENSAMXG00000010209	-	82	49.565	Astyanax_mexicanus
ENSSMAG00000016922	-	50	63.402	ENSAMXG00000031328	-	99	48.894	Astyanax_mexicanus
ENSSMAG00000016922	-	51	68.528	ENSCSEG00000009834	-	99	66.768	Cynoglossus_semilaevis
ENSSMAG00000016922	-	100	70.588	ENSCVAG00000009352	-	99	61.813	Cyprinodon_variegatus
ENSSMAG00000016922	-	51	65.000	ENSCVAG00000000686	-	99	61.694	Cyprinodon_variegatus
ENSSMAG00000016922	-	99	64.615	ENSDARG00000112454	FO744833.2	92	58.333	Danio_rerio
ENSSMAG00000016922	-	57	36.052	ENSDARG00000098398	CABZ01079480.1	99	30.402	Danio_rerio
ENSSMAG00000016922	-	99	68.067	ENSELUG00000013643	-	99	60.610	Esox_lucius
ENSSMAG00000016922	-	81	50.000	ENSELUG00000004826	-	90	30.827	Esox_lucius
ENSSMAG00000016922	-	50	37.438	ENSGMOG00000011217	-	73	30.000	Gadus_morhua
ENSSMAG00000016922	-	60	62.605	ENSGAFG00000015867	-	100	66.300	Gambusia_affinis
ENSSMAG00000016922	-	88	65.698	ENSHBUG00000013327	-	93	69.898	Haplochromis_burtoni
ENSSMAG00000016922	-	50	73.846	ENSHBUG00000015159	-	99	70.648	Haplochromis_burtoni
ENSSMAG00000016922	-	52	69.154	ENSHBUG00000015143	-	99	66.846	Haplochromis_burtoni
ENSSMAG00000016922	-	85	44.122	ENSIPUG00000019762	-	92	48.636	Ictalurus_punctatus
ENSSMAG00000016922	-	99	63.590	ENSIPUG00000019562	-	95	58.974	Ictalurus_punctatus
ENSSMAG00000016922	-	54	35.349	ENSIPUG00000001876	-	100	30.309	Ictalurus_punctatus
ENSSMAG00000016922	-	100	72.772	ENSKMAG00000010882	-	93	72.308	Kryptolebias_marmoratus
ENSSMAG00000016922	-	100	70.202	ENSLBEG00000026419	-	99	64.005	Labrus_bergylta
ENSSMAG00000016922	-	60	70.042	ENSMAMG00000018192	-	98	72.087	Mastacembelus_armatus
ENSSMAG00000016922	-	59	69.362	ENSMAMG00000018261	-	92	75.000	Mastacembelus_armatus
ENSSMAG00000016922	-	100	72.650	ENSMZEG00005002061	-	99	63.789	Maylandia_zebra
ENSSMAG00000016922	-	52	69.652	ENSMZEG00005027858	-	100	67.399	Maylandia_zebra
ENSSMAG00000016922	-	57	71.717	ENSMZEG00005027852	-	100	71.116	Maylandia_zebra
ENSSMAG00000016922	-	93	71.717	ENSMZEG00005027856	-	97	72.727	Maylandia_zebra
ENSSMAG00000016922	-	51	73.869	ENSMZEG00005002038	-	94	70.927	Maylandia_zebra
ENSSMAG00000016922	-	90	76.316	ENSMMOG00000010419	-	95	76.316	Mola_mola
ENSSMAG00000016922	-	51	77.157	ENSMALG00000004165	-	99	71.212	Monopterus_albus
ENSSMAG00000016922	-	50	65.128	ENSNBRG00000003116	-	96	64.164	Neolamprologus_brichardi
ENSSMAG00000016922	-	83	66.978	ENSNBRG00000002998	-	100	67.766	Neolamprologus_brichardi
ENSSMAG00000016922	-	100	70.149	ENSONIG00000000234	-	99	64.692	Oreochromis_niloticus
ENSSMAG00000016922	-	58	73.529	ENSONIG00000000241	-	99	71.485	Oreochromis_niloticus
ENSSMAG00000016922	-	100	63.861	ENSORLG00000017404	-	99	59.700	Oryzias_latipes
ENSSMAG00000016922	-	100	67.172	ENSORLG00000017386	-	94	60.665	Oryzias_latipes
ENSSMAG00000016922	-	52	64.356	ENSORLG00020014210	-	100	62.635	Oryzias_latipes_hni
ENSSMAG00000016922	-	81	57.231	ENSORLG00020014046	-	100	66.016	Oryzias_latipes_hni
ENSSMAG00000016922	-	98	71.429	ENSORLG00015004253	-	96	60.943	Oryzias_latipes_hsok
ENSSMAG00000016922	-	100	64.500	ENSORLG00015004157	-	100	66.406	Oryzias_latipes_hsok
ENSSMAG00000016922	-	100	68.519	ENSOMEG00000009483	-	97	69.375	Oryzias_melastigma
ENSSMAG00000016922	-	51	65.152	ENSOMEG00000009413	-	100	62.590	Oryzias_melastigma
ENSSMAG00000016922	-	82	50.862	ENSPKIG00000004064	-	93	43.671	Paramormyrops_kingsleyae
ENSSMAG00000016922	-	56	59.361	ENSPMGG00000011629	-	95	59.559	Periophthalmus_magnuspinnatus
ENSSMAG00000016922	-	100	70.297	ENSPFOG00000015738	-	100	60.189	Poecilia_formosa
ENSSMAG00000016922	-	81	68.438	ENSPLAG00000022742	-	94	70.202	Poecilia_latipinna
ENSSMAG00000016922	-	60	62.762	ENSPMEG00000003192	-	100	65.672	Poecilia_mexicana
ENSSMAG00000016922	-	99	75.949	ENSPREG00000017145	-	99	77.632	Poecilia_reticulata
ENSSMAG00000016922	-	52	66.832	ENSPNYG00000023890	-	94	66.784	Pundamilia_nyererei
ENSSMAG00000016922	-	97	75.000	ENSPNYG00000006865	-	100	52.427	Pundamilia_nyererei
ENSSMAG00000016922	-	51	71.717	ENSPNYG00000003575	-	100	69.461	Pundamilia_nyererei
ENSSMAG00000016922	-	50	73.846	ENSPNYG00000008208	-	99	70.648	Pundamilia_nyererei
ENSSMAG00000016922	-	57	59.459	ENSPNAG00000004111	-	92	59.191	Pygocentrus_nattereri
ENSSMAG00000016922	-	82	40.741	ENSPNAG00000005968	-	90	38.071	Pygocentrus_nattereri
ENSSMAG00000016922	-	82	64.796	ENSPNAG00000026750	-	95	58.647	Pygocentrus_nattereri
ENSSMAG00000016922	-	99	59.000	ENSSFOG00015006999	-	98	51.199	Scleropages_formosus
ENSSMAG00000016922	-	81	50.413	ENSSFOG00015019732	-	95	43.011	Scleropages_formosus
ENSSMAG00000016922	-	81	80.808	ENSSDUG00000013560	-	98	75.272	Seriola_dumerili
ENSSMAG00000016922	-	50	78.061	ENSSLDG00000011620	-	92	75.556	Seriola_lalandi_dorsalis
ENSSMAG00000016922	-	100	83.019	ENSSPAG00000014708	-	96	72.028	Stegastes_partitus
ENSSMAG00000016922	-	100	62.595	ENSTRUG00000003423	-	98	49.499	Takifugu_rubripes
ENSSMAG00000016922	-	50	61.111	ENSTRUG00000010891	-	100	55.474	Takifugu_rubripes
ENSSMAG00000016922	-	58	61.765	ENSTNIG00000018877	-	100	53.586	Tetraodon_nigroviridis
ENSSMAG00000016922	-	99	75.949	ENSXCOG00000012535	-	100	77.632	Xiphophorus_couchianus
ENSSMAG00000016922	-	81	70.792	ENSXMAG00000015158	-	99	71.717	Xiphophorus_maculatus