EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000016932 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 14469 bases
Position: chr18:12021272-12035740
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000027675	PAM2	PF07145.15	2e-05	1	1
ENSSMAP00000027675	LsmAD	PF06741.13	2.2e-18	1	1
ENSSMAP00000027675	SM-ATX	PF14438.6	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000028018	-	6755	-	ENSSMAP00000027675	1051 (aa)	-	A0A2U9CM08

Gene Model

Click here to download ENSSMAG00000016932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000016932's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000016932	-	95	41.706	ENSG00000168488	ATXN2L	100	67.368	Homo_sapiens
ENSSMAG00000016932	-	100	88.258	ENSAPOG00000021412	-	100	88.258	Acanthochromis_polyacanthus
ENSSMAG00000016932	-	80	82.512	ENSACIG00000014731	-	96	82.878	Amphilophus_citrinellus
ENSSMAG00000016932	-	88	89.763	ENSAOCG00000002581	-	100	89.978	Amphiprion_ocellaris
ENSSMAG00000016932	-	100	90.152	ENSAPEG00000011038	-	100	90.341	Amphiprion_percula
ENSSMAG00000016932	-	100	87.476	ENSATEG00000019382	-	100	86.911	Anabas_testudineus
ENSSMAG00000016932	-	100	85.391	ENSACLG00000009975	-	100	84.920	Astatotilapia_calliptera
ENSSMAG00000016932	-	59	66.406	ENSACLG00000016900	atxn2l	62	46.730	Astatotilapia_calliptera
ENSSMAG00000016932	-	89	61.290	ENSAMXG00000003332	atxn2l	99	61.290	Astyanax_mexicanus
ENSSMAG00000016932	-	97	61.668	ENSAMXG00000020362	-	53	60.477	Astyanax_mexicanus
ENSSMAG00000016932	-	94	41.582	ENSCPOG00000010521	ATXN2L	61	62.868	Cavia_porcellus
ENSSMAG00000016932	-	95	42.135	ENSCATG00000021354	ATXN2L	72	64.437	Cercocebus_atys
ENSSMAG00000016932	-	91	54.962	ENSCGRG00000001500	Atxn2l	60	62.500	Cricetulus_griseus_crigri
ENSSMAG00000016932	-	57	83.914	ENSCSEG00000008530	-	96	86.070	Cynoglossus_semilaevis
ENSSMAG00000016932	-	98	82.705	ENSCVAG00000015825	-	100	82.126	Cyprinodon_variegatus
ENSSMAG00000016932	-	99	56.342	ENSDARG00000011597	atxn2l	99	56.022	Danio_rerio
ENSSMAG00000016932	-	95	43.218	ENSEASG00005014992	ATXN2L	69	63.345	Equus_asinus_asinus
ENSSMAG00000016932	-	99	58.065	ENSELUG00000023740	atxn2l	99	57.601	Esox_lucius
ENSSMAG00000016932	-	87	68.354	ENSELUG00000022915	-	91	65.762	Esox_lucius
ENSSMAG00000016932	-	65	70.822	ENSFHEG00000004491	-	85	71.530	Fundulus_heteroclitus
ENSSMAG00000016932	-	58	61.481	ENSGMOG00000000316	atxn2l	65	62.500	Gadus_morhua
ENSSMAG00000016932	-	69	81.497	ENSGAFG00000019364	-	99	81.088	Gambusia_affinis
ENSSMAG00000016932	-	98	81.099	ENSGACG00000007446	-	100	81.581	Gasterosteus_aculeatus
ENSSMAG00000016932	-	100	85.203	ENSHBUG00000007997	-	100	84.731	Haplochromis_burtoni
ENSSMAG00000016932	-	96	38.760	ENSHGLG00100000705	ATXN2L	63	64.085	Heterocephalus_glaber_male
ENSSMAG00000016932	-	80	87.616	ENSHCOG00000017587	-	100	87.616	Hippocampus_comes
ENSSMAG00000016932	-	99	59.745	ENSIPUG00000001761	atxn2l	99	58.743	Ictalurus_punctatus
ENSSMAG00000016932	-	94	41.338	ENSJJAG00000005629	Atxn2l	60	62.868	Jaculus_jaculus
ENSSMAG00000016932	-	98	83.752	ENSKMAG00000021450	-	100	82.995	Kryptolebias_marmoratus
ENSSMAG00000016932	-	100	85.728	ENSLBEG00000022720	-	100	85.822	Labrus_bergylta
ENSSMAG00000016932	-	94	42.300	ENSMFAG00000030590	ATXN2L	60	63.958	Macaca_fascicularis
ENSSMAG00000016932	-	100	84.674	ENSMAMG00000013005	-	100	85.052	Mastacembelus_armatus
ENSSMAG00000016932	-	100	85.391	ENSMZEG00005013869	-	100	84.920	Maylandia_zebra
ENSSMAG00000016932	-	95	42.710	ENSMOCG00000020882	Atxn2l	60	62.868	Microtus_ochrogaster
ENSSMAG00000016932	-	95	42.615	ENSMODG00000015570	ATXN2L	90	40.853	Monodelphis_domestica
ENSSMAG00000016932	-	84	82.338	ENSMALG00000008430	-	93	85.677	Monopterus_albus
ENSSMAG00000016932	-	95	42.589	MGP_CAROLIEiJ_G0030450	Atxn2l	77	70.760	Mus_caroli
ENSSMAG00000016932	-	95	42.683	ENSMUSG00000032637	Atxn2l	77	70.760	Mus_musculus
ENSSMAG00000016932	-	95	42.362	MGP_PahariEiJ_G0013660	Atxn2l	60	62.868	Mus_pahari
ENSSMAG00000016932	-	95	42.777	MGP_SPRETEiJ_G0031564	Atxn2l	77	70.760	Mus_spretus
ENSSMAG00000016932	-	94	40.909	ENSNGAG00000021446	Atxn2l	60	62.500	Nannospalax_galili
ENSSMAG00000016932	-	58	48.837	ENSNLEG00000033414	-	64	48.450	Nomascus_leucogenys
ENSSMAG00000016932	-	94	42.170	ENSNLEG00000011004	ATXN2L	63	64.085	Nomascus_leucogenys
ENSSMAG00000016932	-	98	85.342	ENSONIG00000011478	-	100	84.282	Oreochromis_niloticus
ENSSMAG00000016932	-	95	50.678	ENSONIG00000009388	atxn2l	72	68.519	Oreochromis_niloticus
ENSSMAG00000016932	-	100	81.321	ENSORLG00000006059	-	100	81.415	Oryzias_latipes
ENSSMAG00000016932	-	100	80.943	ENSORLG00020000991	-	100	81.226	Oryzias_latipes_hni
ENSSMAG00000016932	-	100	81.038	ENSORLG00015014174	-	100	81.226	Oryzias_latipes_hsok
ENSSMAG00000016932	-	100	81.038	ENSOMEG00000021118	-	100	81.698	Oryzias_melastigma
ENSSMAG00000016932	-	91	42.551	ENSOARG00000002503	ATXN2L	61	62.868	Ovis_aries
ENSSMAG00000016932	-	80	56.716	ENSPPAG00000036236	-	66	53.906	Pan_paniscus
ENSSMAG00000016932	-	72	78.295	ENSPMGG00000014821	-	100	75.648	Periophthalmus_magnuspinnatus
ENSSMAG00000016932	-	98	81.141	ENSPFOG00000005935	-	100	81.625	Poecilia_formosa
ENSSMAG00000016932	-	98	81.238	ENSPLAG00000017094	-	100	81.721	Poecilia_latipinna
ENSSMAG00000016932	-	98	81.044	ENSPMEG00000017227	-	100	81.528	Poecilia_mexicana
ENSSMAG00000016932	-	98	82.592	ENSPREG00000023090	-	100	82.302	Poecilia_reticulata
ENSSMAG00000016932	-	89	35.223	ENSPPYG00000017765	-	54	60.448	Pongo_abelii
ENSSMAG00000016932	-	94	38.752	ENSPVAG00000003958	ATXN2L	59	54.064	Pteropus_vampyrus
ENSSMAG00000016932	-	100	85.391	ENSPNYG00000017058	-	100	84.920	Pundamilia_nyererei
ENSSMAG00000016932	-	73	66.926	ENSPNYG00000012482	atxn2l	94	54.447	Pundamilia_nyererei
ENSSMAG00000016932	-	100	60.870	ENSPNAG00000023685	-	100	59.229	Pygocentrus_nattereri
ENSSMAG00000016932	-	99	59.286	ENSPNAG00000014538	atxn2l	99	59.657	Pygocentrus_nattereri
ENSSMAG00000016932	-	74	68.313	ENSRBIG00000036712	ATXN2L	65	69.328	Rhinopithecus_bieti
ENSSMAG00000016932	-	94	42.197	ENSSBOG00000025782	ATXN2L	71	62.868	Saimiri_boliviensis_boliviensis
ENSSMAG00000016932	-	100	57.841	ENSSFOG00015001018	atxn2l	99	56.169	Scleropages_formosus
ENSSMAG00000016932	-	98	92.166	ENSSDUG00000023014	-	100	92.166	Seriola_dumerili
ENSSMAG00000016932	-	92	72.029	ENSSLDG00000017701	-	99	72.131	Seriola_lalandi_dorsalis
ENSSMAG00000016932	-	100	89.077	ENSSPAG00000008174	-	100	89.171	Stegastes_partitus
ENSSMAG00000016932	-	100	85.877	ENSTRUG00000007132	-	100	85.687	Takifugu_rubripes
ENSSMAG00000016932	-	98	82.546	ENSTNIG00000018942	-	100	82.160	Tetraodon_nigroviridis
ENSSMAG00000016932	-	94	40.300	ENSTTRG00000005913	ATXN2L	54	63.732	Tursiops_truncatus
ENSSMAG00000016932	-	94	41.667	ENSUMAG00000009437	ATXN2L	79	63.830	Ursus_maritimus
ENSSMAG00000016932	-	70	53.406	ENSXETG00000014990	atxn2l	97	54.651	Xenopus_tropicalis
ENSSMAG00000016932	-	79	78.141	ENSXCOG00000001128	-	95	78.141	Xiphophorus_couchianus
ENSSMAG00000016932	-	98	81.389	ENSXMAG00000010133	-	100	81.099	Xiphophorus_maculatus