EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000016933 (Gene tree)
Gene ID: -
Gene Symbol: RNPS1
Alias: wu:fa19a11|zgc:65775
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 3227 bases
Position: chr19:11650372-11653598
Accession: 10080
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000027678	RRM_1	PF00076.22	1.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000028020	RNPS1-201	834	-	ENSSMAP00000027678	277 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000016933's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000016933's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000016933	RNPS1	50	65.068	ENSG00000205937	RNPS1	85	70.539	Homo_sapiens
ENSSMAG00000016933	RNPS1	82	84.279	ENSAPOG00000017310	RNPS1	72	89.956	Acanthochromis_polyacanthus
ENSSMAG00000016933	RNPS1	77	78.774	ENSACIG00000014367	-	77	78.774	Amphilophus_citrinellus
ENSSMAG00000016933	RNPS1	82	78.355	ENSAOCG00000002404	RNPS1	83	80.519	Amphiprion_ocellaris
ENSSMAG00000016933	RNPS1	82	78.261	ENSAPEG00000006497	RNPS1	80	80.435	Amphiprion_percula
ENSSMAG00000016933	RNPS1	82	80.087	ENSATEG00000024267	RNPS1	83	82.684	Anabas_testudineus
ENSSMAG00000016933	RNPS1	84	67.083	ENSANAG00000028802	RNPS1	85	70.124	Aotus_nancymaae
ENSSMAG00000016933	RNPS1	82	84.279	ENSACLG00000025942	RNPS1	82	84.279	Astatotilapia_calliptera
ENSSMAG00000016933	RNPS1	82	74.459	ENSAMXG00000006330	-	82	72.727	Astyanax_mexicanus
ENSSMAG00000016933	RNPS1	70	64.851	ENSCJAG00000014969	RNPS1	90	66.977	Callithrix_jacchus
ENSSMAG00000016933	RNPS1	92	59.231	ENSCHIG00000027175	-	71	57.820	Capra_hircus
ENSSMAG00000016933	RNPS1	70	64.356	ENSCCAG00000034480	RNPS1	85	70.124	Cebus_capucinus
ENSSMAG00000016933	RNPS1	93	64.015	ENSCATG00000042361	-	80	64.435	Cercocebus_atys
ENSSMAG00000016933	RNPS1	97	72.464	ENSCSAG00000005219	-	81	69.710	Chlorocebus_sabaeus
ENSSMAG00000016933	RNPS1	75	51.659	ENSCPBG00000000214	RNPS1	74	53.738	Chrysemys_picta_bellii
ENSSMAG00000016933	RNPS1	61	50.610	ENSCING00000016317	-	81	55.769	Ciona_intestinalis
ENSSMAG00000016933	RNPS1	75	66.667	ENSCGRG00000014021	Rnps1	77	70.046	Cricetulus_griseus_crigri
ENSSMAG00000016933	RNPS1	82	67.841	ENSCSEG00000000402	RNPS1	76	68.996	Cynoglossus_semilaevis
ENSSMAG00000016933	RNPS1	82	74.783	ENSCSEG00000015997	RNPS1	80	78.261	Cynoglossus_semilaevis
ENSSMAG00000016933	RNPS1	77	81.395	ENSCVAG00000010868	RNPS1	77	82.791	Cyprinodon_variegatus
ENSSMAG00000016933	RNPS1	84	67.083	ENSDORG00000001755	Rnps1	85	70.124	Dipodomys_ordii
ENSSMAG00000016933	RNPS1	75	71.292	ENSELUG00000015003	RNPS1	77	74.178	Esox_lucius
ENSSMAG00000016933	RNPS1	84	67.500	ENSFDAG00000003386	RNPS1	85	70.539	Fukomys_damarensis
ENSSMAG00000016933	RNPS1	77	79.167	ENSFHEG00000011705	RNPS1	77	81.481	Fundulus_heteroclitus
ENSSMAG00000016933	RNPS1	77	80.000	ENSGAFG00000005457	RNPS1	77	82.326	Gambusia_affinis
ENSSMAG00000016933	RNPS1	82	80.172	ENSGACG00000011261	RNPS1	83	82.328	Gasterosteus_aculeatus
ENSSMAG00000016933	RNPS1	82	67.826	ENSGACG00000005641	-	82	73.913	Gasterosteus_aculeatus
ENSSMAG00000016933	RNPS1	82	83.843	ENSHBUG00000002494	RNPS1	82	83.843	Haplochromis_burtoni
ENSSMAG00000016933	RNPS1	84	65.957	ENSHGLG00100001721	-	78	65.532	Heterocephalus_glaber_male
ENSSMAG00000016933	RNPS1	82	69.915	ENSHCOG00000004424	RNPS1	83	73.729	Hippocampus_comes
ENSSMAG00000016933	RNPS1	84	65.957	ENSJJAG00000019234	-	68	65.957	Jaculus_jaculus
ENSSMAG00000016933	RNPS1	82	78.261	ENSKMAG00000009135	RNPS1	82	80.000	Kryptolebias_marmoratus
ENSSMAG00000016933	RNPS1	84	67.083	ENSMFAG00000044121	-	83	64.286	Macaca_fascicularis
ENSSMAG00000016933	RNPS1	86	67.755	ENSMMUG00000041726	-	84	64.435	Macaca_mulatta
ENSSMAG00000016933	RNPS1	86	68.163	ENSMNEG00000024827	-	84	64.435	Macaca_nemestrina
ENSSMAG00000016933	RNPS1	75	66.047	ENSMLEG00000040232	-	83	63.084	Mandrillus_leucophaeus
ENSSMAG00000016933	RNPS1	82	80.519	ENSMAMG00000021609	-	83	83.117	Mastacembelus_armatus
ENSSMAG00000016933	RNPS1	82	75.109	ENSMAMG00000021148	-	81	75.109	Mastacembelus_armatus
ENSSMAG00000016933	RNPS1	82	84.279	ENSMZEG00005012742	RNPS1	82	84.279	Maylandia_zebra
ENSSMAG00000016933	RNPS1	76	78.571	ENSMMOG00000010863	RNPS1	77	81.604	Mola_mola
ENSSMAG00000016933	RNPS1	77	78.302	ENSNBRG00000023437	RNPS1	77	81.132	Neolamprologus_brichardi
ENSSMAG00000016933	RNPS1	87	66.667	ENSNLEG00000009243	RNPS1	98	68.980	Nomascus_leucogenys
ENSSMAG00000016933	RNPS1	60	53.892	ENSODEG00000002513	-	52	48.333	Octodon_degus
ENSSMAG00000016933	RNPS1	82	73.684	ENSORLG00000008033	RNPS1	94	76.847	Oryzias_latipes
ENSSMAG00000016933	RNPS1	82	73.568	ENSORLG00020020207	RNPS1	82	73.568	Oryzias_latipes_hni
ENSSMAG00000016933	RNPS1	82	74.009	ENSORLG00015000305	-	82	74.009	Oryzias_latipes_hsok
ENSSMAG00000016933	RNPS1	87	63.968	ENSPPAG00000011845	RNPS1	86	65.975	Pan_paniscus
ENSSMAG00000016933	RNPS1	58	68.098	ENSPTIG00000015643	RNPS1	65	80.645	Panthera_tigris_altaica
ENSSMAG00000016933	RNPS1	71	65.517	ENSPTRG00000031310	RNPS1	85	70.539	Pan_troglodytes
ENSSMAG00000016933	RNPS1	72	64.734	ENSPTRG00000046326	-	81	68.269	Pan_troglodytes
ENSSMAG00000016933	RNPS1	82	75.319	ENSPKIG00000023465	RNPS1	83	72.340	Paramormyrops_kingsleyae
ENSSMAG00000016933	RNPS1	84	67.083	ENSPCIG00000025012	RNPS1	85	70.124	Phascolarctos_cinereus
ENSSMAG00000016933	RNPS1	58	69.325	ENSPCIG00000016114	-	60	78.400	Phascolarctos_cinereus
ENSSMAG00000016933	RNPS1	77	80.930	ENSPFOG00000009978	RNPS1	77	83.256	Poecilia_formosa
ENSSMAG00000016933	RNPS1	77	80.930	ENSPLAG00000009343	RNPS1	77	83.256	Poecilia_latipinna
ENSSMAG00000016933	RNPS1	77	80.930	ENSPMEG00000008552	RNPS1	77	83.256	Poecilia_mexicana
ENSSMAG00000016933	RNPS1	77	80.930	ENSPREG00000001843	RNPS1	77	83.256	Poecilia_reticulata
ENSSMAG00000016933	RNPS1	82	84.279	ENSPNYG00000000585	RNPS1	82	84.279	Pundamilia_nyererei
ENSSMAG00000016933	RNPS1	82	74.026	ENSPNAG00000025479	RNPS1	82	72.294	Pygocentrus_nattereri
ENSSMAG00000016933	RNPS1	84	69.198	ENSRNOG00000027239	AABR07037800.1	78	69.492	Rattus_norvegicus
ENSSMAG00000016933	RNPS1	82	74.894	ENSSFOG00015022746	RNPS1	85	72.340	Scleropages_formosus
ENSSMAG00000016933	RNPS1	82	76.724	ENSSFOG00015019341	-	73	74.459	Scleropages_formosus
ENSSMAG00000016933	RNPS1	82	80.087	ENSSDUG00000011453	RNPS1	83	82.684	Seriola_dumerili
ENSSMAG00000016933	RNPS1	82	69.163	ENSSDUG00000006433	-	76	71.179	Seriola_dumerili
ENSSMAG00000016933	RNPS1	80	87.387	ENSSLDG00000021341	RNPS1	81	93.243	Seriola_lalandi_dorsalis
ENSSMAG00000016933	RNPS1	82	78.355	ENSSPAG00000009383	RNPS1	83	80.952	Stegastes_partitus
ENSSMAG00000016933	RNPS1	82	75.107	ENSTRUG00000008602	RNPS1	83	77.253	Takifugu_rubripes
ENSSMAG00000016933	RNPS1	82	75.862	ENSTNIG00000009753	RNPS1	81	78.017	Tetraodon_nigroviridis
ENSSMAG00000016933	RNPS1	82	78.261	ENSXMAG00000004827	RNPS1	82	80.000	Xiphophorus_maculatus