EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000017028 (Gene tree)
Gene ID: -
Gene Symbol: bicc1a
Alias: -
Full Name: BicC family RNA binding protein 1a
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 51204 bases
Position: chr15:420828-472031
Accession: ZDB-GENE-101223-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000027827	KH_1	PF00013.29	7.1e-34	1	2
ENSSMAP00000027827	KH_1	PF00013.29	7.1e-34	2	2
ENSSMAP00000027862	KH_1	PF00013.29	1.4e-33	1	2
ENSSMAP00000027862	KH_1	PF00013.29	1.4e-33	2	2
ENSSMAP00000027870	KH_1	PF00013.29	1.4e-32	1	2
ENSSMAP00000027870	KH_1	PF00013.29	1.4e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000028209	-	2910	-	ENSSMAP00000027862	969 (aa)	-	-
ENSSMAT00000028218	-	7361	-	ENSSMAP00000027870	891 (aa)	-	-
ENSSMAT00000028174	-	6981	-	ENSSMAP00000027827	972 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000017028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000017028's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000017028	bicc1a	71	51.332	ENSSMAG00000001751	bicc2	82	52.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000017028	bicc1a	100	72.387	ENSG00000122870	BICC1	100	72.984	Homo_sapiens
ENSSMAG00000017028	bicc1a	100	94.678	ENSAPOG00000004667	bicc1a	100	94.882	Acanthochromis_polyacanthus
ENSSMAG00000017028	bicc1a	100	72.607	ENSAMEG00000013342	BICC1	100	72.688	Ailuropoda_melanoleuca
ENSSMAG00000017028	bicc1a	100	95.089	ENSAOCG00000022325	bicc1a	100	95.189	Amphiprion_ocellaris
ENSSMAG00000017028	bicc1a	100	95.201	ENSAPEG00000005966	bicc1a	100	95.292	Amphiprion_percula
ENSSMAG00000017028	bicc1a	100	95.419	ENSATEG00000008634	bicc1a	100	95.389	Anabas_testudineus
ENSSMAG00000017028	bicc1a	97	74.124	ENSAPLG00000015162	BICC1	100	74.379	Anas_platyrhynchos
ENSSMAG00000017028	bicc1a	100	73.789	ENSACAG00000001892	BICC1	87	73.598	Anolis_carolinensis
ENSSMAG00000017028	bicc1a	100	72.937	ENSANAG00000022803	BICC1	100	72.897	Aotus_nancymaae
ENSSMAG00000017028	bicc1a	100	93.238	ENSACLG00000019426	bicc1a	100	93.238	Astatotilapia_calliptera
ENSSMAG00000017028	bicc1a	100	80.996	ENSAMXG00000030961	bicc1b	100	81.256	Astyanax_mexicanus
ENSSMAG00000017028	bicc1a	94	63.200	ENSAMXG00000011396	bicc1a	100	64.113	Astyanax_mexicanus
ENSSMAG00000017028	bicc1a	100	73.678	ENSBTAG00000010694	BICC1	100	73.112	Bos_taurus
ENSSMAG00000017028	bicc1a	100	72.167	ENSCJAG00000010639	BICC1	91	72.782	Callithrix_jacchus
ENSSMAG00000017028	bicc1a	98	72.492	ENSCAFG00000012331	BICC1	100	72.830	Canis_familiaris
ENSSMAG00000017028	bicc1a	100	72.277	ENSCAFG00020026888	BICC1	100	72.782	Canis_lupus_dingo
ENSSMAG00000017028	bicc1a	100	73.348	ENSCHIG00000009725	BICC1	100	73.030	Capra_hircus
ENSSMAG00000017028	bicc1a	100	72.958	ENSTSYG00000004527	BICC1	98	73.285	Carlito_syrichta
ENSSMAG00000017028	bicc1a	86	76.839	ENSCAPG00000014361	BICC1	92	76.839	Cavia_aperea
ENSSMAG00000017028	bicc1a	100	72.277	ENSCPOG00000015585	BICC1	99	73.247	Cavia_porcellus
ENSSMAG00000017028	bicc1a	100	72.057	ENSCCAG00000028110	BICC1	100	72.681	Cebus_capucinus
ENSSMAG00000017028	bicc1a	100	72.937	ENSCATG00000016603	BICC1	100	72.883	Cercocebus_atys
ENSSMAG00000017028	bicc1a	100	71.744	ENSCLAG00000012171	BICC1	100	71.909	Chinchilla_lanigera
ENSSMAG00000017028	bicc1a	100	72.856	ENSCSAG00000007305	BICC1	100	73.185	Chlorocebus_sabaeus
ENSSMAG00000017028	bicc1a	90	86.842	ENSCHOG00000010828	BICC1	91	86.842	Choloepus_hoffmanni
ENSSMAG00000017028	bicc1a	100	74.369	ENSCPBG00000005820	BICC1	100	74.597	Chrysemys_picta_bellii
ENSSMAG00000017028	bicc1a	95	41.686	ENSCSAVG00000004820	-	100	42.934	Ciona_savignyi
ENSSMAG00000017028	bicc1a	100	73.157	ENSCANG00000037900	BICC1	99	73.706	Colobus_angolensis_palliatus
ENSSMAG00000017028	bicc1a	100	71.696	ENSCGRG00001019138	Bicc1	100	72.020	Cricetulus_griseus_chok1gshd
ENSSMAG00000017028	bicc1a	100	71.696	ENSCGRG00000005736	Bicc1	100	72.601	Cricetulus_griseus_crigri
ENSSMAG00000017028	bicc1a	100	93.992	ENSCSEG00000005038	bicc1a	100	94.094	Cynoglossus_semilaevis
ENSSMAG00000017028	bicc1a	100	91.732	ENSCVAG00000015896	bicc1a	100	91.437	Cyprinodon_variegatus
ENSSMAG00000017028	bicc1a	100	67.251	ENSDARG00000061682	bicc1a	99	67.103	Danio_rerio
ENSSMAG00000017028	bicc1a	100	73.597	ENSDNOG00000009338	BICC1	100	74.037	Dasypus_novemcinctus
ENSSMAG00000017028	bicc1a	100	72.777	ENSDORG00000011450	Bicc1	100	72.718	Dipodomys_ordii
ENSSMAG00000017028	bicc1a	100	63.390	ENSETEG00000010754	BICC1	100	63.791	Echinops_telfairi
ENSSMAG00000017028	bicc1a	80	42.818	ENSEBUG00000016015	-	90	57.389	Eptatretus_burgeri
ENSSMAG00000017028	bicc1a	100	72.250	ENSEASG00005013784	BICC1	100	72.581	Equus_asinus_asinus
ENSSMAG00000017028	bicc1a	100	71.947	ENSECAG00000013979	BICC1	99	71.183	Equus_caballus
ENSSMAG00000017028	bicc1a	91	82.759	ENSEEUG00000001269	BICC1	100	56.243	Erinaceus_europaeus
ENSSMAG00000017028	bicc1a	100	88.367	ENSELUG00000005613	bicc1a	100	88.367	Esox_lucius
ENSSMAG00000017028	bicc1a	100	71.947	ENSFCAG00000006211	BICC1	91	72.480	Felis_catus
ENSSMAG00000017028	bicc1a	100	71.765	ENSFALG00000002247	BICC1	100	71.765	Ficedula_albicollis
ENSSMAG00000017028	bicc1a	100	72.265	ENSFDAG00000016201	BICC1	100	73.210	Fukomys_damarensis
ENSSMAG00000017028	bicc1a	100	84.246	ENSFHEG00000022447	bicc1a	99	84.727	Fundulus_heteroclitus
ENSSMAG00000017028	bicc1a	100	83.065	ENSGMOG00000018749	bicc1a	100	83.923	Gadus_morhua
ENSSMAG00000017028	bicc1a	100	74.395	ENSGALG00000036095	BICC1	98	74.378	Gallus_gallus
ENSSMAG00000017028	bicc1a	96	91.880	ENSGAFG00000012165	bicc1a	98	91.880	Gambusia_affinis
ENSSMAG00000017028	bicc1a	100	87.817	ENSGACG00000010043	bicc1a	100	87.817	Gasterosteus_aculeatus
ENSSMAG00000017028	bicc1a	100	74.229	ENSGAGG00000012189	BICC1	99	74.367	Gopherus_agassizii
ENSSMAG00000017028	bicc1a	100	73.047	ENSGGOG00000005484	BICC1	100	72.984	Gorilla_gorilla
ENSSMAG00000017028	bicc1a	100	93.340	ENSHBUG00000016079	bicc1a	100	93.340	Haplochromis_burtoni
ENSSMAG00000017028	bicc1a	96	71.398	ENSHGLG00000005632	-	98	72.381	Heterocephalus_glaber_female
ENSSMAG00000017028	bicc1a	100	72.044	ENSHGLG00100015631	-	100	72.874	Heterocephalus_glaber_male
ENSSMAG00000017028	bicc1a	100	92.626	ENSHCOG00000017407	bicc1a	100	92.025	Hippocampus_comes
ENSSMAG00000017028	bicc1a	100	79.558	ENSIPUG00000008467	bicc1	100	78.173	Ictalurus_punctatus
ENSSMAG00000017028	bicc1a	100	73.377	ENSSTOG00000000168	BICC1	100	73.382	Ictidomys_tridecemlineatus
ENSSMAG00000017028	bicc1a	100	71.634	ENSJJAG00000015090	Bicc1	98	72.268	Jaculus_jaculus
ENSSMAG00000017028	bicc1a	100	92.119	ENSKMAG00000000780	bicc1a	100	92.119	Kryptolebias_marmoratus
ENSSMAG00000017028	bicc1a	100	95.307	ENSLBEG00000021160	bicc1a	100	95.184	Labrus_bergylta
ENSSMAG00000017028	bicc1a	98	73.423	ENSLACG00000010091	BICC1	100	73.506	Latimeria_chalumnae
ENSSMAG00000017028	bicc1a	100	80.914	ENSLOCG00000006500	bicc1a	100	80.914	Lepisosteus_oculatus
ENSSMAG00000017028	bicc1a	98	72.492	ENSLAFG00000007749	BICC1	100	72.943	Loxodonta_africana
ENSSMAG00000017028	bicc1a	100	73.157	ENSMFAG00000036177	BICC1	100	73.085	Macaca_fascicularis
ENSSMAG00000017028	bicc1a	100	73.157	ENSMMUG00000015750	BICC1	98	72.708	Macaca_mulatta
ENSSMAG00000017028	bicc1a	100	72.497	ENSMNEG00000009601	BICC1	100	73.085	Macaca_nemestrina
ENSSMAG00000017028	bicc1a	100	72.937	ENSMLEG00000040006	BICC1	99	73.042	Mandrillus_leucophaeus
ENSSMAG00000017028	bicc1a	100	95.196	ENSMAMG00000016363	bicc1a	100	95.082	Mastacembelus_armatus
ENSSMAG00000017028	bicc1a	100	93.238	ENSMZEG00005027431	bicc1a	100	93.238	Maylandia_zebra
ENSSMAG00000017028	bicc1a	98	70.734	ENSMGAG00000002729	BICC1	100	70.993	Meleagris_gallopavo
ENSSMAG00000017028	bicc1a	100	71.035	ENSMAUG00000018772	Bicc1	100	71.414	Mesocricetus_auratus
ENSSMAG00000017028	bicc1a	100	72.119	ENSMICG00000002045	BICC1	100	72.755	Microcebus_murinus
ENSSMAG00000017028	bicc1a	100	71.665	ENSMOCG00000020143	Bicc1	100	72.036	Microtus_ochrogaster
ENSSMAG00000017028	bicc1a	100	90.266	ENSMMOG00000008063	bicc1a	100	90.266	Mola_mola
ENSSMAG00000017028	bicc1a	96	72.176	ENSMODG00000016125	BICC1	86	72.414	Monodelphis_domestica
ENSSMAG00000017028	bicc1a	100	93.743	ENSMALG00000019124	bicc1a	100	93.648	Monopterus_albus
ENSSMAG00000017028	bicc1a	100	71.601	MGP_CAROLIEiJ_G0015426	Bicc1	100	71.932	Mus_caroli
ENSSMAG00000017028	bicc1a	100	71.665	ENSMUSG00000014329	Bicc1	100	71.903	Mus_musculus
ENSSMAG00000017028	bicc1a	100	73.098	MGP_PahariEiJ_G0030842	Bicc1	100	72.636	Mus_pahari
ENSSMAG00000017028	bicc1a	100	71.903	MGP_SPRETEiJ_G0016239	Bicc1	100	72.105	Mus_spretus
ENSSMAG00000017028	bicc1a	95	63.121	ENSMPUG00000010431	BICC1	100	63.006	Mustela_putorius_furo
ENSSMAG00000017028	bicc1a	99	71.207	ENSMLUG00000005170	BICC1	99	71.539	Myotis_lucifugus
ENSSMAG00000017028	bicc1a	100	72.497	ENSNGAG00000023605	Bicc1	100	72.608	Nannospalax_galili
ENSSMAG00000017028	bicc1a	100	93.135	ENSNBRG00000015387	bicc1a	100	93.135	Neolamprologus_brichardi
ENSSMAG00000017028	bicc1a	100	72.228	ENSNLEG00000012284	BICC1	100	72.837	Nomascus_leucogenys
ENSSMAG00000017028	bicc1a	82	82.566	ENSMEUG00000005472	BICC1	92	82.371	Notamacropus_eugenii
ENSSMAG00000017028	bicc1a	100	67.291	ENSOPRG00000009804	-	100	67.857	Ochotona_princeps
ENSSMAG00000017028	bicc1a	100	70.897	ENSODEG00000000545	BICC1	100	71.715	Octodon_degus
ENSSMAG00000017028	bicc1a	100	93.855	ENSONIG00000000620	bicc1a	100	93.852	Oreochromis_niloticus
ENSSMAG00000017028	bicc1a	81	80.000	ENSOANG00000013223	BICC1	87	79.577	Ornithorhynchus_anatinus
ENSSMAG00000017028	bicc1a	96	71.323	ENSOCUG00000013696	BICC1	98	72.304	Oryctolagus_cuniculus
ENSSMAG00000017028	bicc1a	100	90.471	ENSORLG00000005313	bicc1a	100	90.574	Oryzias_latipes
ENSSMAG00000017028	bicc1a	100	90.574	ENSORLG00020010305	bicc1a	100	90.676	Oryzias_latipes_hni
ENSSMAG00000017028	bicc1a	100	90.471	ENSORLG00015015393	bicc1a	100	90.574	Oryzias_latipes_hsok
ENSSMAG00000017028	bicc1a	100	90.984	ENSOMEG00000009659	bicc1a	100	90.984	Oryzias_melastigma
ENSSMAG00000017028	bicc1a	100	72.357	ENSOGAG00000000304	BICC1	100	72.874	Otolemur_garnettii
ENSSMAG00000017028	bicc1a	100	72.828	ENSOARG00000004086	BICC1	100	72.929	Ovis_aries
ENSSMAG00000017028	bicc1a	100	73.047	ENSPPAG00000035110	BICC1	99	73.203	Pan_paniscus
ENSSMAG00000017028	bicc1a	100	71.617	ENSPPRG00000023988	BICC1	100	72.177	Panthera_pardus
ENSSMAG00000017028	bicc1a	100	71.727	ENSPTIG00000006974	BICC1	99	72.495	Panthera_tigris_altaica
ENSSMAG00000017028	bicc1a	100	73.047	ENSPTRG00000002520	BICC1	98	72.865	Pan_troglodytes
ENSSMAG00000017028	bicc1a	100	72.296	ENSPANG00000022024	BICC1	95	72.306	Papio_anubis
ENSSMAG00000017028	bicc1a	100	81.301	ENSPKIG00000025290	bicc1b	100	81.504	Paramormyrops_kingsleyae
ENSSMAG00000017028	bicc1a	100	73.238	ENSPSIG00000009802	BICC1	100	73.568	Pelodiscus_sinensis
ENSSMAG00000017028	bicc1a	100	85.922	ENSPMGG00000004168	bicc1a	97	85.922	Periophthalmus_magnuspinnatus
ENSSMAG00000017028	bicc1a	100	71.978	ENSPEMG00000014055	Bicc1	100	72.495	Peromyscus_maniculatus_bairdii
ENSSMAG00000017028	bicc1a	51	58.105	ENSPMAG00000005468	-	99	53.257	Petromyzon_marinus
ENSSMAG00000017028	bicc1a	100	73.765	ENSPCIG00000028868	BICC1	100	73.769	Phascolarctos_cinereus
ENSSMAG00000017028	bicc1a	100	92.179	ENSPFOG00000018348	bicc1a	100	92.025	Poecilia_formosa
ENSSMAG00000017028	bicc1a	100	91.193	ENSPLAG00000010377	bicc1a	100	91.122	Poecilia_latipinna
ENSSMAG00000017028	bicc1a	100	92.067	ENSPMEG00000020413	bicc1a	100	91.922	Poecilia_mexicana
ENSSMAG00000017028	bicc1a	90	95.726	ENSPREG00000010793	bicc1a	95	95.726	Poecilia_reticulata
ENSSMAG00000017028	bicc1a	100	72.937	ENSPPYG00000002429	BICC1	100	72.240	Pongo_abelii
ENSSMAG00000017028	bicc1a	100	62.184	ENSPCAG00000007197	BICC1	100	62.424	Procavia_capensis
ENSSMAG00000017028	bicc1a	100	72.525	ENSPCOG00000028597	BICC1	100	72.874	Propithecus_coquereli
ENSSMAG00000017028	bicc1a	100	67.547	ENSPVAG00000008004	BICC1	100	68.448	Pteropus_vampyrus
ENSSMAG00000017028	bicc1a	100	93.135	ENSPNYG00000002818	bicc1a	100	93.135	Pundamilia_nyererei
ENSSMAG00000017028	bicc1a	100	80.793	ENSPNAG00000019026	bicc1b	100	80.773	Pygocentrus_nattereri
ENSSMAG00000017028	bicc1a	94	59.096	ENSPNAG00000026738	bicc1a	100	59.754	Pygocentrus_nattereri
ENSSMAG00000017028	bicc1a	100	71.617	ENSRNOG00000000614	Bicc1	100	72.277	Rattus_norvegicus
ENSSMAG00000017028	bicc1a	100	69.780	ENSRBIG00000030483	BICC1	97	69.807	Rhinopithecus_bieti
ENSSMAG00000017028	bicc1a	100	72.967	ENSRROG00000017888	BICC1	100	73.407	Rhinopithecus_roxellana
ENSSMAG00000017028	bicc1a	100	72.937	ENSSBOG00000029991	BICC1	100	73.018	Saimiri_boliviensis_boliviensis
ENSSMAG00000017028	bicc1a	100	74.062	ENSSHAG00000011416	BICC1	100	74.393	Sarcophilus_harrisii
ENSSMAG00000017028	bicc1a	100	73.467	ENSSFOG00015008406	BICC1	100	74.187	Scleropages_formosus
ENSSMAG00000017028	bicc1a	100	96.425	ENSSDUG00000017080	bicc1a	100	96.209	Seriola_dumerili
ENSSMAG00000017028	bicc1a	100	96.425	ENSSLDG00000015619	bicc1a	100	96.425	Seriola_lalandi_dorsalis
ENSSMAG00000017028	bicc1a	100	70.865	ENSSARG00000011303	BICC1	100	71.828	Sorex_araneus
ENSSMAG00000017028	bicc1a	100	95.394	ENSSPAG00000015300	bicc1a	100	95.394	Stegastes_partitus
ENSSMAG00000017028	bicc1a	100	71.947	ENSSSCG00000010204	BICC1	98	72.072	Sus_scrofa
ENSSMAG00000017028	bicc1a	100	74.009	ENSTGUG00000005584	BICC1	100	74.298	Taeniopygia_guttata
ENSSMAG00000017028	bicc1a	100	90.179	ENSTRUG00000008560	bicc1a	100	90.072	Takifugu_rubripes
ENSSMAG00000017028	bicc1a	100	85.857	ENSTNIG00000017029	-	99	86.004	Tetraodon_nigroviridis
ENSSMAG00000017028	bicc1a	100	87.947	ENSTNIG00000019377	bicc1a	100	87.947	Tetraodon_nigroviridis
ENSSMAG00000017028	bicc1a	67	81.081	ENSTBEG00000012202	BICC1	68	84.091	Tupaia_belangeri
ENSSMAG00000017028	bicc1a	100	70.971	ENSTTRG00000017309	BICC1	100	71.614	Tursiops_truncatus
ENSSMAG00000017028	bicc1a	100	72.607	ENSUMAG00000006522	BICC1	95	73.150	Ursus_maritimus
ENSSMAG00000017028	bicc1a	62	88.333	ENSVPAG00000008214	BICC1	65	88.333	Vicugna_pacos
ENSSMAG00000017028	bicc1a	100	72.937	ENSVVUG00000008341	BICC1	100	72.782	Vulpes_vulpes
ENSSMAG00000017028	bicc1a	79	65.750	ENSXETG00000005117	bicc1	99	66.040	Xenopus_tropicalis
ENSSMAG00000017028	bicc1a	100	91.732	ENSXMAG00000007368	bicc1a	100	91.616	Xiphophorus_maculatus