EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000017226 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-107m4.1
Alias: -
Full Name: si:ch211-107m4.1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 9375 bases
Position: chr13:10022376-10031750
Accession: ZDB-GENE-081107-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000028184	SAP	PF02037.27	1.6e-08	1	1
ENSSMAP00000028198	SAP	PF02037.27	1.7e-08	1	1
ENSSMAP00000028153	SAP	PF02037.27	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000028504	-	6884	-	ENSSMAP00000028153	646 (aa)	-	-
ENSSMAT00000028549	-	5636	-	ENSSMAP00000028198	629 (aa)	-	A0A2U9C5Z2
ENSSMAT00000028535	-	6770	-	ENSSMAP00000028184	608 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000017226's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000017226's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000017226	si:ch211-107m4.1	69	36.574	ENSSMAG00000003607	hnrnpub	75	32.759
ENSSMAG00000017226	si:ch211-107m4.1	93	35.884	ENSSMAG00000020270	HNRNPUL1	70	35.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000017226	si:ch211-107m4.1	86	36.731	ENSG00000214753	HNRNPUL2	95	34.759	Homo_sapiens
ENSSMAG00000017226	si:ch211-107m4.1	99	68.871	ENSAPOG00000005128	si:ch211-107m4.1	99	68.075	Acanthochromis_polyacanthus
ENSSMAG00000017226	si:ch211-107m4.1	99	62.360	ENSACIG00000022729	si:ch211-107m4.1	88	62.360	Amphilophus_citrinellus
ENSSMAG00000017226	si:ch211-107m4.1	97	66.501	ENSAOCG00000017297	si:ch211-107m4.1	99	63.400	Amphiprion_ocellaris
ENSSMAG00000017226	si:ch211-107m4.1	97	65.289	ENSAPEG00000009122	-	99	62.290	Amphiprion_percula
ENSSMAG00000017226	si:ch211-107m4.1	70	41.743	ENSACAG00000000746	-	56	39.264	Anolis_carolinensis
ENSSMAG00000017226	si:ch211-107m4.1	94	36.694	ENSANAG00000027153	-	95	35.034	Aotus_nancymaae
ENSSMAG00000017226	si:ch211-107m4.1	99	67.152	ENSACLG00000018069	si:ch211-107m4.1	99	66.193	Astatotilapia_calliptera
ENSSMAG00000017226	si:ch211-107m4.1	99	47.761	ENSAMXG00000033712	si:ch211-107m4.1	82	50.746	Astyanax_mexicanus
ENSSMAG00000017226	si:ch211-107m4.1	85	38.447	ENSBTAG00000002510	HNRNPUL2	95	34.435	Bos_taurus
ENSSMAG00000017226	si:ch211-107m4.1	83	37.294	ENSCJAG00000018709	-	95	34.388	Callithrix_jacchus
ENSSMAG00000017226	si:ch211-107m4.1	94	36.529	ENSCAFG00000015686	-	95	34.848	Canis_familiaris
ENSSMAG00000017226	si:ch211-107m4.1	94	36.529	ENSCAFG00020013120	-	95	34.848	Canis_lupus_dingo
ENSSMAG00000017226	si:ch211-107m4.1	85	38.636	ENSCHIG00000020213	-	95	34.573	Capra_hircus
ENSSMAG00000017226	si:ch211-107m4.1	94	34.899	ENSCCAG00000037674	-	95	33.520	Cebus_capucinus
ENSSMAG00000017226	si:ch211-107m4.1	85	39.394	ENSCATG00000034588	-	95	35.034	Cercocebus_atys
ENSSMAG00000017226	si:ch211-107m4.1	85	39.394	ENSCSAG00000006701	-	92	35.034	Chlorocebus_sabaeus
ENSSMAG00000017226	si:ch211-107m4.1	70	44.138	ENSCPBG00000017963	-	66	40.347	Chrysemys_picta_bellii
ENSSMAG00000017226	si:ch211-107m4.1	79	38.748	ENSCGRG00001017076	Hnrnpul2	95	34.669	Cricetulus_griseus_chok1gshd
ENSSMAG00000017226	si:ch211-107m4.1	93	65.338	ENSCSEG00000005686	si:ch211-107m4.1	94	65.299	Cynoglossus_semilaevis
ENSSMAG00000017226	si:ch211-107m4.1	99	63.124	ENSCVAG00000006862	si:ch211-107m4.1	99	62.208	Cyprinodon_variegatus
ENSSMAG00000017226	si:ch211-107m4.1	80	47.773	ENSDARG00000056830	si:ch211-107m4.1	71	47.348	Danio_rerio
ENSSMAG00000017226	si:ch211-107m4.1	70	42.627	ENSDNOG00000006508	-	95	34.884	Dasypus_novemcinctus
ENSSMAG00000017226	si:ch211-107m4.1	88	35.974	ENSDORG00000008678	Hnrnpul2	95	34.807	Dipodomys_ordii
ENSSMAG00000017226	si:ch211-107m4.1	94	36.198	ENSEASG00005011347	-	95	34.711	Equus_asinus_asinus
ENSSMAG00000017226	si:ch211-107m4.1	94	36.033	ENSECAG00000020298	-	95	34.573	Equus_caballus
ENSSMAG00000017226	si:ch211-107m4.1	93	50.192	ENSELUG00000008134	si:ch211-107m4.1	90	46.299	Esox_lucius
ENSSMAG00000017226	si:ch211-107m4.1	94	36.033	ENSFCAG00000014766	-	95	34.435	Felis_catus
ENSSMAG00000017226	si:ch211-107m4.1	99	63.987	ENSFHEG00000014731	si:ch211-107m4.1	99	64.263	Fundulus_heteroclitus
ENSSMAG00000017226	si:ch211-107m4.1	99	65.161	ENSGAFG00000016579	si:ch211-107m4.1	99	64.496	Gambusia_affinis
ENSSMAG00000017226	si:ch211-107m4.1	93	62.187	ENSGACG00000017006	si:ch211-107m4.1	99	61.260	Gasterosteus_aculeatus
ENSSMAG00000017226	si:ch211-107m4.1	70	44.138	ENSGAGG00000016818	-	85	34.626	Gopherus_agassizii
ENSSMAG00000017226	si:ch211-107m4.1	94	35.702	ENSGGOG00000011722	HNRNPUL2	95	34.573	Gorilla_gorilla
ENSSMAG00000017226	si:ch211-107m4.1	99	67.314	ENSHBUG00000013076	si:ch211-107m4.1	99	66.351	Haplochromis_burtoni
ENSSMAG00000017226	si:ch211-107m4.1	70	41.705	ENSHGLG00000003285	-	95	33.989	Heterocephalus_glaber_female
ENSSMAG00000017226	si:ch211-107m4.1	99	41.365	ENSIPUG00000009518	si:ch211-107m4.1	99	41.365	Ictalurus_punctatus
ENSSMAG00000017226	si:ch211-107m4.1	85	38.636	ENSSTOG00000004327	-	95	34.525	Ictidomys_tridecemlineatus
ENSSMAG00000017226	si:ch211-107m4.1	87	36.972	ENSJJAG00000011206	Hnrnpul2	91	35.498	Jaculus_jaculus
ENSSMAG00000017226	si:ch211-107m4.1	99	66.341	ENSKMAG00000003651	si:ch211-107m4.1	99	66.032	Kryptolebias_marmoratus
ENSSMAG00000017226	si:ch211-107m4.1	70	43.056	ENSLACG00000009304	-	95	35.519	Latimeria_chalumnae
ENSSMAG00000017226	si:ch211-107m4.1	86	36.508	ENSLAFG00000005377	-	95	35.027	Loxodonta_africana
ENSSMAG00000017226	si:ch211-107m4.1	85	39.394	ENSMFAG00000041014	-	95	35.034	Macaca_fascicularis
ENSSMAG00000017226	si:ch211-107m4.1	85	39.394	ENSMNEG00000036955	-	95	35.034	Macaca_nemestrina
ENSSMAG00000017226	si:ch211-107m4.1	100	65.544	ENSMAMG00000021489	si:ch211-107m4.1	100	65.544	Mastacembelus_armatus
ENSSMAG00000017226	si:ch211-107m4.1	99	67.152	ENSMZEG00005005136	si:ch211-107m4.1	99	66.193	Maylandia_zebra
ENSSMAG00000017226	si:ch211-107m4.1	79	38.943	ENSMAUG00000013163	Hnrnpul2	95	34.435	Mesocricetus_auratus
ENSSMAG00000017226	si:ch211-107m4.1	85	38.447	ENSMICG00000009943	-	95	34.250	Microcebus_murinus
ENSSMAG00000017226	si:ch211-107m4.1	63	42.718	ENSMOCG00000020000	Hnrnpul2	93	34.382	Microtus_ochrogaster
ENSSMAG00000017226	si:ch211-107m4.1	83	76.082	ENSMALG00000011564	si:ch211-107m4.1	92	76.082	Monopterus_albus
ENSSMAG00000017226	si:ch211-107m4.1	79	38.943	MGP_CAROLIEiJ_G0022656	Hnrnpul2	95	34.669	Mus_caroli
ENSSMAG00000017226	si:ch211-107m4.1	79	39.139	ENSMUSG00000071659	Hnrnpul2	95	34.945	Mus_musculus
ENSSMAG00000017226	si:ch211-107m4.1	79	38.943	MGP_PahariEiJ_G0014151	Hnrnpul2	95	34.530	Mus_pahari
ENSSMAG00000017226	si:ch211-107m4.1	79	39.139	MGP_SPRETEiJ_G0023569	Hnrnpul2	95	34.807	Mus_spretus
ENSSMAG00000017226	si:ch211-107m4.1	94	36.033	ENSMPUG00000013707	-	94	34.435	Mustela_putorius_furo
ENSSMAG00000017226	si:ch211-107m4.1	79	39.530	ENSMLUG00000000412	-	95	33.924	Myotis_lucifugus
ENSSMAG00000017226	si:ch211-107m4.1	94	36.529	ENSNGAG00000012005	Hnrnpul2	95	34.705	Nannospalax_galili
ENSSMAG00000017226	si:ch211-107m4.1	99	64.344	ENSNBRG00000000429	si:ch211-107m4.1	91	64.148	Neolamprologus_brichardi
ENSSMAG00000017226	si:ch211-107m4.1	82	39.686	ENSNLEG00000004077	-	76	36.903	Nomascus_leucogenys
ENSSMAG00000017226	si:ch211-107m4.1	99	65.329	ENSONIG00000005422	si:ch211-107m4.1	99	64.420	Oreochromis_niloticus
ENSSMAG00000017226	si:ch211-107m4.1	79	39.530	ENSOCUG00000009474	-	95	35.310	Oryctolagus_cuniculus
ENSSMAG00000017226	si:ch211-107m4.1	99	61.367	ENSORLG00000024574	si:ch211-107m4.1	99	60.945	Oryzias_latipes
ENSSMAG00000017226	si:ch211-107m4.1	99	62.480	ENSOMEG00000018153	si:ch211-107m4.1	99	61.551	Oryzias_melastigma
ENSSMAG00000017226	si:ch211-107m4.1	70	42.299	ENSOGAG00000003302	-	98	34.459	Otolemur_garnettii
ENSSMAG00000017226	si:ch211-107m4.1	94	36.033	ENSOARG00000016817	-	95	34.573	Ovis_aries
ENSSMAG00000017226	si:ch211-107m4.1	94	36.033	ENSPPRG00000006380	-	95	34.435	Panthera_pardus
ENSSMAG00000017226	si:ch211-107m4.1	94	35.702	ENSPTRG00000034359	HNRNPUL2	95	34.897	Pan_troglodytes
ENSSMAG00000017226	si:ch211-107m4.1	85	39.619	ENSPANG00000023745	-	98	36.697	Papio_anubis
ENSSMAG00000017226	si:ch211-107m4.1	79	39.139	ENSPEMG00000015546	Hnrnpul2	95	34.711	Peromyscus_maniculatus_bairdii
ENSSMAG00000017226	si:ch211-107m4.1	69	42.691	ENSPCIG00000015254	-	55	38.475	Phascolarctos_cinereus
ENSSMAG00000017226	si:ch211-107m4.1	90	64.138	ENSPFOG00000008050	si:ch211-107m4.1	100	64.138	Poecilia_formosa
ENSSMAG00000017226	si:ch211-107m4.1	99	63.929	ENSPLAG00000003485	si:ch211-107m4.1	99	63.215	Poecilia_latipinna
ENSSMAG00000017226	si:ch211-107m4.1	99	64.355	ENSPMEG00000005490	si:ch211-107m4.1	99	63.622	Poecilia_mexicana
ENSSMAG00000017226	si:ch211-107m4.1	99	62.839	ENSPREG00000014973	si:ch211-107m4.1	99	63.117	Poecilia_reticulata
ENSSMAG00000017226	si:ch211-107m4.1	70	42.396	ENSPCAG00000010016	-	95	33.838	Procavia_capensis
ENSSMAG00000017226	si:ch211-107m4.1	86	36.219	ENSPCOG00000013502	-	95	33.931	Propithecus_coquereli
ENSSMAG00000017226	si:ch211-107m4.1	79	38.943	ENSPVAG00000003475	-	95	34.890	Pteropus_vampyrus
ENSSMAG00000017226	si:ch211-107m4.1	79	38.943	ENSRNOG00000019507	Hnrnpul2	95	34.716	Rattus_norvegicus
ENSSMAG00000017226	si:ch211-107m4.1	85	39.394	ENSRBIG00000037820	-	95	35.034	Rhinopithecus_bieti
ENSSMAG00000017226	si:ch211-107m4.1	85	39.394	ENSRROG00000036561	-	95	35.034	Rhinopithecus_roxellana
ENSSMAG00000017226	si:ch211-107m4.1	92	60.976	ENSSFOG00015006544	si:ch211-107m4.1	67	60.976	Scleropages_formosus
ENSSMAG00000017226	si:ch211-107m4.1	99	68.594	ENSSPAG00000006972	si:ch211-107m4.1	99	67.830	Stegastes_partitus
ENSSMAG00000017226	si:ch211-107m4.1	69	42.691	ENSSSCG00000028542	-	84	35.725	Sus_scrofa
ENSSMAG00000017226	si:ch211-107m4.1	97	57.610	ENSTRUG00000012843	si:ch211-107m4.1	99	55.590	Takifugu_rubripes
ENSSMAG00000017226	si:ch211-107m4.1	91	55.348	ENSTNIG00000000741	si:ch211-107m4.1	100	55.348	Tetraodon_nigroviridis
ENSSMAG00000017226	si:ch211-107m4.1	70	43.889	ENSTTRG00000002475	-	83	36.260	Tursiops_truncatus
ENSSMAG00000017226	si:ch211-107m4.1	85	38.636	ENSUAMG00000025971	-	95	34.435	Ursus_americanus
ENSSMAG00000017226	si:ch211-107m4.1	94	36.364	ENSVVUG00000029847	-	95	34.711	Vulpes_vulpes
ENSSMAG00000017226	si:ch211-107m4.1	99	33.333	ENSXETG00000006015	hnrnpul2	91	35.311	Xenopus_tropicalis
ENSSMAG00000017226	si:ch211-107m4.1	99	63.226	ENSXMAG00000003224	si:ch211-107m4.1	99	62.636	Xiphophorus_maculatus