EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000017410 (Gene tree)
Gene ID: -
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 8823 bases
Position: chr6:11630475-11639297
Accession: ZDB-GENE-030131-6372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000028497	dsrm	PF00035.26	4.4e-45	1	3
ENSSMAP00000028497	dsrm	PF00035.26	4.4e-45	2	3
ENSSMAP00000028497	dsrm	PF00035.26	4.4e-45	3	3
ENSSMAP00000028467	dsrm	PF00035.26	4.4e-45	1	3
ENSSMAP00000028467	dsrm	PF00035.26	4.4e-45	2	3
ENSSMAP00000028467	dsrm	PF00035.26	4.4e-45	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000028820	-	3171	-	ENSSMAP00000028467	690 (aa)	-	-
ENSSMAT00000028850	-	3041	-	ENSSMAP00000028497	698 (aa)	-	A0A2U9BFW4

Gene Model

Click here to download ENSSMAG00000017410's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000017410's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000017410	stau1	84	49.429	ENSSMAG00000016487	stau2	100	45.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000017410	stau1	96	72.201	ENSG00000124214	STAU1	99	74.850	Homo_sapiens
ENSSMAG00000017410	stau1	100	94.356	ENSAPOG00000017260	stau1	100	94.356	Acanthochromis_polyacanthus
ENSSMAG00000017410	stau1	96	70.597	ENSAMEG00000013681	STAU1	95	70.703	Ailuropoda_melanoleuca
ENSSMAG00000017410	stau1	100	91.159	ENSACIG00000015918	stau1	100	92.174	Amphilophus_citrinellus
ENSSMAG00000017410	stau1	100	95.369	ENSAOCG00000012224	stau1	100	95.369	Amphiprion_ocellaris
ENSSMAG00000017410	stau1	100	95.658	ENSAPEG00000012308	stau1	100	95.658	Amphiprion_percula
ENSSMAG00000017410	stau1	100	93.669	ENSATEG00000024600	stau1	100	93.669	Anabas_testudineus
ENSSMAG00000017410	stau1	99	71.290	ENSAPLG00000010527	STAU1	100	71.034	Anas_platyrhynchos
ENSSMAG00000017410	stau1	99	72.946	ENSACAG00000015909	STAU1	99	72.843	Anolis_carolinensis
ENSSMAG00000017410	stau1	95	71.218	ENSANAG00000032714	STAU1	99	71.218	Aotus_nancymaae
ENSSMAG00000017410	stau1	100	91.799	ENSACLG00000012270	stau1	100	91.799	Astatotilapia_calliptera
ENSSMAG00000017410	stau1	89	78.879	ENSAMXG00000016812	stau1	98	78.879	Astyanax_mexicanus
ENSSMAG00000017410	stau1	96	71.455	ENSBTAG00000000241	STAU1	99	71.455	Bos_taurus
ENSSMAG00000017410	stau1	96	72.015	ENSCJAG00000016233	STAU1	99	72.015	Callithrix_jacchus
ENSSMAG00000017410	stau1	95	71.455	ENSCAFG00000011347	STAU1	99	69.853	Canis_familiaris
ENSSMAG00000017410	stau1	95	70.000	ENSCAFG00020017123	STAU1	99	73.322	Canis_lupus_dingo
ENSSMAG00000017410	stau1	96	70.896	ENSCHIG00000001799	-	99	70.896	Capra_hircus
ENSSMAG00000017410	stau1	93	72.023	ENSTSYG00000036179	-	95	72.023	Carlito_syrichta
ENSSMAG00000017410	stau1	72	73.054	ENSCAPG00000017041	STAU1	99	72.854	Cavia_aperea
ENSSMAG00000017410	stau1	71	71.400	ENSCPOG00000005566	STAU1	99	71.400	Cavia_porcellus
ENSSMAG00000017410	stau1	95	71.218	ENSCCAG00000034339	STAU1	99	71.218	Cebus_capucinus
ENSSMAG00000017410	stau1	96	75.966	ENSCATG00000028474	STAU1	99	75.966	Cercocebus_atys
ENSSMAG00000017410	stau1	72	60.442	ENSCLAG00000002784	-	99	60.843	Chinchilla_lanigera
ENSSMAG00000017410	stau1	71	74.400	ENSCLAG00000006516	-	99	74.400	Chinchilla_lanigera
ENSSMAG00000017410	stau1	72	74.651	ENSCSAG00000014986	STAU1	99	74.651	Chlorocebus_sabaeus
ENSSMAG00000017410	stau1	96	72.439	ENSCHOG00000001511	STAU1	99	72.439	Choloepus_hoffmanni
ENSSMAG00000017410	stau1	100	72.805	ENSCPBG00000026741	STAU1	100	72.805	Chrysemys_picta_bellii
ENSSMAG00000017410	stau1	96	72.388	ENSCANG00000039220	STAU1	99	72.388	Colobus_angolensis_palliatus
ENSSMAG00000017410	stau1	71	70.200	ENSCGRG00001013453	Stau1	99	70.200	Cricetulus_griseus_chok1gshd
ENSSMAG00000017410	stau1	71	70.200	ENSCGRG00000007216	Stau1	99	70.200	Cricetulus_griseus_crigri
ENSSMAG00000017410	stau1	100	79.014	ENSCSEG00000000792	stau1	100	80.000	Cynoglossus_semilaevis
ENSSMAG00000017410	stau1	96	81.015	ENSCVAG00000005906	stau1	100	82.331	Cyprinodon_variegatus
ENSSMAG00000017410	stau1	100	80.636	ENSDARG00000044182	stau1	100	80.636	Danio_rerio
ENSSMAG00000017410	stau1	96	72.439	ENSDNOG00000014933	STAU1	97	72.253	Dasypus_novemcinctus
ENSSMAG00000017410	stau1	71	73.684	ENSDORG00000030220	Stau1	99	73.684	Dipodomys_ordii
ENSSMAG00000017410	stau1	67	76.821	ENSETEG00000018235	STAU1	80	76.821	Echinops_telfairi
ENSSMAG00000017410	stau1	96	70.606	ENSEASG00005023343	STAU1	99	71.402	Equus_asinus_asinus
ENSSMAG00000017410	stau1	96	72.201	ENSECAG00000012894	STAU1	99	72.201	Equus_caballus
ENSSMAG00000017410	stau1	57	77.665	ENSEEUG00000014344	STAU1	68	77.665	Erinaceus_europaeus
ENSSMAG00000017410	stau1	99	82.955	ENSELUG00000002529	stau1	99	84.219	Esox_lucius
ENSSMAG00000017410	stau1	96	72.575	ENSFCAG00000001447	STAU1	99	72.575	Felis_catus
ENSSMAG00000017410	stau1	99	72.896	ENSFALG00000012940	STAU1	100	72.468	Ficedula_albicollis
ENSSMAG00000017410	stau1	71	73.200	ENSFDAG00000014119	-	99	73.200	Fukomys_damarensis
ENSSMAG00000017410	stau1	72	57.086	ENSFDAG00000020837	-	99	55.689	Fukomys_damarensis
ENSSMAG00000017410	stau1	99	89.769	ENSFHEG00000013517	stau1	99	89.769	Fundulus_heteroclitus
ENSSMAG00000017410	stau1	100	73.492	ENSGMOG00000016850	stau1	100	73.492	Gadus_morhua
ENSSMAG00000017410	stau1	99	73.362	ENSGALG00000004736	STAU1	100	73.257	Gallus_gallus
ENSSMAG00000017410	stau1	99	90.346	ENSGAFG00000010437	stau1	100	90.216	Gambusia_affinis
ENSSMAG00000017410	stau1	100	91.618	ENSGACG00000001352	stau1	100	91.618	Gasterosteus_aculeatus
ENSSMAG00000017410	stau1	100	73.286	ENSGAGG00000009825	STAU1	100	73.286	Gopherus_agassizii
ENSSMAG00000017410	stau1	93	67.156	ENSGGOG00000025351	STAU1	99	77.747	Gorilla_gorilla
ENSSMAG00000017410	stau1	100	91.942	ENSHBUG00000023668	stau1	100	91.942	Haplochromis_burtoni
ENSSMAG00000017410	stau1	71	75.101	ENSHGLG00000008730	STAU1	99	75.101	Heterocephalus_glaber_female
ENSSMAG00000017410	stau1	71	75.101	ENSHGLG00100000098	STAU1	99	75.101	Heterocephalus_glaber_male
ENSSMAG00000017410	stau1	100	84.195	ENSHCOG00000018461	stau1	100	84.195	Hippocampus_comes
ENSSMAG00000017410	stau1	100	76.957	ENSIPUG00000023725	stau1	100	76.957	Ictalurus_punctatus
ENSSMAG00000017410	stau1	71	73.887	ENSSTOG00000003634	STAU1	99	73.887	Ictidomys_tridecemlineatus
ENSSMAG00000017410	stau1	71	72.672	ENSJJAG00000020032	Stau1	99	72.672	Jaculus_jaculus
ENSSMAG00000017410	stau1	99	87.391	ENSKMAG00000007135	stau1	99	87.971	Kryptolebias_marmoratus
ENSSMAG00000017410	stau1	100	92.185	ENSLBEG00000020172	stau1	100	92.185	Labrus_bergylta
ENSSMAG00000017410	stau1	98	72.923	ENSLACG00000016157	STAU1	97	72.923	Latimeria_chalumnae
ENSSMAG00000017410	stau1	99	77.666	ENSLOCG00000003134	stau1	100	78.273	Lepisosteus_oculatus
ENSSMAG00000017410	stau1	74	74.708	ENSLAFG00000003238	STAU1	99	74.708	Loxodonta_africana
ENSSMAG00000017410	stau1	96	75.966	ENSMFAG00000040931	STAU1	99	78.519	Macaca_fascicularis
ENSSMAG00000017410	stau1	93	66.972	ENSMMUG00000002302	STAU1	99	78.519	Macaca_mulatta
ENSSMAG00000017410	stau1	96	75.000	ENSMNEG00000033821	STAU1	99	75.000	Macaca_nemestrina
ENSSMAG00000017410	stau1	96	72.201	ENSMLEG00000031383	STAU1	99	72.201	Mandrillus_leucophaeus
ENSSMAG00000017410	stau1	100	94.935	ENSMAMG00000017586	stau1	100	95.173	Mastacembelus_armatus
ENSSMAG00000017410	stau1	100	91.931	ENSMZEG00005015605	stau1	100	91.931	Maylandia_zebra
ENSSMAG00000017410	stau1	99	71.133	ENSMGAG00000004719	STAU1	100	71.034	Meleagris_gallopavo
ENSSMAG00000017410	stau1	71	70.200	ENSMAUG00000013846	Stau1	99	70.200	Mesocricetus_auratus
ENSSMAG00000017410	stau1	95	70.295	ENSMICG00000001995	STAU1	99	70.295	Microcebus_murinus
ENSSMAG00000017410	stau1	71	71.166	ENSMOCG00000018743	Stau1	99	70.600	Microtus_ochrogaster
ENSSMAG00000017410	stau1	100	89.001	ENSMMOG00000015455	stau1	100	89.001	Mola_mola
ENSSMAG00000017410	stau1	96	72.849	ENSMODG00000016276	STAU1	99	72.849	Monodelphis_domestica
ENSSMAG00000017410	stau1	100	93.198	ENSMALG00000000045	stau1	100	93.198	Monopterus_albus
ENSSMAG00000017410	stau1	71	71.837	MGP_CAROLIEiJ_G0024699	Stau1	100	71.690	Mus_caroli
ENSSMAG00000017410	stau1	71	71.224	ENSMUSG00000039536	Stau1	100	71.079	Mus_musculus
ENSSMAG00000017410	stau1	71	71.053	MGP_PahariEiJ_G0026141	Stau1	99	71.053	Mus_pahari
ENSSMAG00000017410	stau1	71	71.224	MGP_SPRETEiJ_G0025619	Stau1	100	71.079	Mus_spretus
ENSSMAG00000017410	stau1	94	71.001	ENSMPUG00000017581	STAU1	99	71.001	Mustela_putorius_furo
ENSSMAG00000017410	stau1	95	71.455	ENSMLUG00000008407	STAU1	97	71.455	Myotis_lucifugus
ENSSMAG00000017410	stau1	71	71.600	ENSNGAG00000007108	Stau1	99	71.600	Nannospalax_galili
ENSSMAG00000017410	stau1	100	91.942	ENSNBRG00000017596	stau1	100	91.942	Neolamprologus_brichardi
ENSSMAG00000017410	stau1	96	72.015	ENSNLEG00000006955	STAU1	99	73.767	Nomascus_leucogenys
ENSSMAG00000017410	stau1	67	78.355	ENSMEUG00000003263	STAU1	80	78.355	Notamacropus_eugenii
ENSSMAG00000017410	stau1	77	70.446	ENSOPRG00000014569	STAU1	93	70.446	Ochotona_princeps
ENSSMAG00000017410	stau1	72	74.251	ENSODEG00000006523	STAU1	99	74.251	Octodon_degus
ENSSMAG00000017410	stau1	100	89.231	ENSONIG00000004152	stau1	99	89.231	Oreochromis_niloticus
ENSSMAG00000017410	stau1	99	70.982	ENSOANG00000006394	STAU1	96	72.607	Ornithorhynchus_anatinus
ENSSMAG00000017410	stau1	77	71.322	ENSOCUG00000006214	STAU1	95	71.322	Oryctolagus_cuniculus
ENSSMAG00000017410	stau1	99	87.826	ENSOMEG00000002388	stau1	99	87.826	Oryzias_melastigma
ENSSMAG00000017410	stau1	95	72.779	ENSOGAG00000002127	STAU1	97	72.779	Otolemur_garnettii
ENSSMAG00000017410	stau1	72	52.096	ENSOGAG00000028222	-	99	51.600	Otolemur_garnettii
ENSSMAG00000017410	stau1	96	70.896	ENSOARG00000012204	STAU1	99	70.134	Ovis_aries
ENSSMAG00000017410	stau1	93	66.972	ENSPPAG00000032023	STAU1	99	77.747	Pan_paniscus
ENSSMAG00000017410	stau1	96	72.761	ENSPPRG00000003436	STAU1	99	75.250	Panthera_pardus
ENSSMAG00000017410	stau1	96	72.761	ENSPTIG00000011768	STAU1	99	74.606	Panthera_tigris_altaica
ENSSMAG00000017410	stau1	93	66.972	ENSPTRG00000023130	STAU1	99	77.747	Pan_troglodytes
ENSSMAG00000017410	stau1	96	75.966	ENSPANG00000020560	STAU1	99	75.966	Papio_anubis
ENSSMAG00000017410	stau1	100	78.745	ENSPKIG00000024588	stau1	100	79.315	Paramormyrops_kingsleyae
ENSSMAG00000017410	stau1	99	73.963	ENSPSIG00000010731	STAU1	99	73.857	Pelodiscus_sinensis
ENSSMAG00000017410	stau1	100	85.940	ENSPMGG00000018553	stau1	100	85.940	Periophthalmus_magnuspinnatus
ENSSMAG00000017410	stau1	71	70.200	ENSPEMG00000022045	Stau1	99	70.200	Peromyscus_maniculatus_bairdii
ENSSMAG00000017410	stau1	99	70.839	ENSPCIG00000023269	STAU1	97	75.292	Phascolarctos_cinereus
ENSSMAG00000017410	stau1	100	88.649	ENSPFOG00000017253	stau1	100	88.649	Poecilia_formosa
ENSSMAG00000017410	stau1	64	79.551	ENSPLAG00000014829	stau1	96	83.463	Poecilia_latipinna
ENSSMAG00000017410	stau1	100	85.057	ENSPMEG00000007495	stau1	99	85.180	Poecilia_mexicana
ENSSMAG00000017410	stau1	100	89.368	ENSPREG00000003477	stau1	100	89.368	Poecilia_reticulata
ENSSMAG00000017410	stau1	96	72.067	ENSPPYG00000011111	STAU1	99	72.067	Pongo_abelii
ENSSMAG00000017410	stau1	73	65.476	ENSPCAG00000002459	STAU1	99	65.476	Procavia_capensis
ENSSMAG00000017410	stau1	95	71.455	ENSPCOG00000027746	STAU1	99	73.176	Propithecus_coquereli
ENSSMAG00000017410	stau1	66	79.139	ENSPVAG00000015019	STAU1	86	79.139	Pteropus_vampyrus
ENSSMAG00000017410	stau1	100	91.942	ENSPNYG00000014436	stau1	100	91.942	Pundamilia_nyererei
ENSSMAG00000017410	stau1	100	80.836	ENSPNAG00000011323	stau1	100	81.268	Pygocentrus_nattereri
ENSSMAG00000017410	stau1	71	70.600	ENSRNOG00000007781	Stau1	99	70.600	Rattus_norvegicus
ENSSMAG00000017410	stau1	72	74.303	ENSRBIG00000037345	STAU1	100	74.104	Rhinopithecus_bieti
ENSSMAG00000017410	stau1	96	75.000	ENSRROG00000039008	STAU1	99	75.000	Rhinopithecus_roxellana
ENSSMAG00000017410	stau1	95	71.218	ENSSBOG00000034448	STAU1	99	71.257	Saimiri_boliviensis_boliviensis
ENSSMAG00000017410	stau1	96	73.507	ENSSHAG00000009492	STAU1	99	72.889	Sarcophilus_harrisii
ENSSMAG00000017410	stau1	100	81.205	ENSSFOG00015021497	stau1	100	81.205	Scleropages_formosus
ENSSMAG00000017410	stau1	100	95.948	ENSSDUG00000019439	stau1	100	95.948	Seriola_dumerili
ENSSMAG00000017410	stau1	100	95.658	ENSSLDG00000025040	stau1	100	95.658	Seriola_lalandi_dorsalis
ENSSMAG00000017410	stau1	100	72.702	ENSSPUG00000017983	STAU1	99	73.009	Sphenodon_punctatus
ENSSMAG00000017410	stau1	100	95.224	ENSSPAG00000019275	stau1	100	95.224	Stegastes_partitus
ENSSMAG00000017410	stau1	96	71.828	ENSSSCG00000027444	STAU1	99	74.669	Sus_scrofa
ENSSMAG00000017410	stau1	100	70.483	ENSTGUG00000008784	STAU1	100	70.483	Taeniopygia_guttata
ENSSMAG00000017410	stau1	100	88.345	ENSTRUG00000005837	stau1	100	88.921	Takifugu_rubripes
ENSSMAG00000017410	stau1	97	86.370	ENSTNIG00000014732	stau1	99	86.370	Tetraodon_nigroviridis
ENSSMAG00000017410	stau1	96	61.825	ENSTBEG00000009404	STAU1	99	61.825	Tupaia_belangeri
ENSSMAG00000017410	stau1	67	73.593	ENSTTRG00000004285	STAU1	80	73.593	Tursiops_truncatus
ENSSMAG00000017410	stau1	72	73.031	ENSUAMG00000025449	STAU1	99	73.031	Ursus_americanus
ENSSMAG00000017410	stau1	55	70.312	ENSUMAG00000024475	STAU1	89	70.312	Ursus_maritimus
ENSSMAG00000017410	stau1	96	72.015	ENSVPAG00000001313	STAU1	99	72.015	Vicugna_pacos
ENSSMAG00000017410	stau1	95	70.147	ENSVVUG00000022325	STAU1	99	70.000	Vulpes_vulpes
ENSSMAG00000017410	stau1	96	71.513	ENSXETG00000001783	stau1	96	71.111	Xenopus_tropicalis
ENSSMAG00000017410	stau1	53	86.863	ENSXCOG00000008804	stau1	94	85.523	Xiphophorus_couchianus
ENSSMAG00000017410	stau1	99	89.625	ENSXMAG00000016175	stau1	99	89.625	Xiphophorus_maculatus