EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000017447 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 4015 bases
Position: chr6:23180896-23184910
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000028562	RRM_1	PF00076.22	1.3e-30	1	2
ENSSMAP00000028562	RRM_1	PF00076.22	1.3e-30	2	2
ENSSMAP00000028562	RRM_3	PF08777.11	5.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000028915	-	987	-	ENSSMAP00000028562	328 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000017447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000017447's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000017447	-	54	38.830	ENSSMAG00000002039	srsf9	70	39.153
ENSSMAG00000017447	-	50	42.690	ENSSMAG00000007018	-	65	42.690
ENSSMAG00000017447	-	54	59.067	ENSSMAG00000019728	srsf5b	77	55.777
ENSSMAG00000017447	-	54	57.143	ENSSMAG00000010899	srsf5a	64	58.163
ENSSMAG00000017447	-	55	73.481	ENSSMAG00000001707	srsf4	50	72.928
ENSSMAG00000017447	-	50	44.444	ENSSMAG00000009719	-	66	44.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000017447	-	55	79.891	ENSG00000124193	SRSF6	56	88.158	Homo_sapiens
ENSSMAG00000017447	-	55	64.865	ENSAMEG00000003710	SRSF6	53	64.481	Ailuropoda_melanoleuca
ENSSMAG00000017447	-	81	76.779	ENSACIG00000020091	-	95	85.827	Amphilophus_citrinellus
ENSSMAG00000017447	-	90	62.376	ENSACIG00000023658	-	55	82.022	Amphilophus_citrinellus
ENSSMAG00000017447	-	92	77.888	ENSAOCG00000004309	-	96	78.931	Amphiprion_ocellaris
ENSSMAG00000017447	-	55	83.152	ENSAPEG00000013086	-	53	82.609	Amphiprion_percula
ENSSMAG00000017447	-	57	87.500	ENSAPEG00000020746	-	75	75.319	Amphiprion_percula
ENSSMAG00000017447	-	95	83.810	ENSATEG00000007255	-	96	81.191	Anabas_testudineus
ENSSMAG00000017447	-	55	81.667	ENSACAG00000002061	SRSF6	66	75.862	Anolis_carolinensis
ENSSMAG00000017447	-	55	79.891	ENSANAG00000024080	SRSF6	56	88.158	Aotus_nancymaae
ENSSMAG00000017447	-	55	79.459	ENSAMXG00000042692	-	96	77.778	Astyanax_mexicanus
ENSSMAG00000017447	-	55	80.214	ENSAMXG00000003101	-	68	66.148	Astyanax_mexicanus
ENSSMAG00000017447	-	55	80.435	ENSBTAG00000008527	SRSF6	56	89.474	Bos_taurus
ENSSMAG00000017447	-	77	64.453	ENSCJAG00000048403	SRSF6	67	80.220	Callithrix_jacchus
ENSSMAG00000017447	-	55	80.435	ENSCAFG00000009289	SRSF6	56	89.474	Canis_familiaris
ENSSMAG00000017447	-	55	80.435	ENSCAFG00020013559	SRSF6	56	89.474	Canis_lupus_dingo
ENSSMAG00000017447	-	55	79.891	ENSCHIG00000009148	-	53	80.220	Capra_hircus
ENSSMAG00000017447	-	55	80.435	ENSCHIG00000015890	-	56	89.474	Capra_hircus
ENSSMAG00000017447	-	55	75.000	ENSCPOG00000011761	SRSF6	56	88.158	Cavia_porcellus
ENSSMAG00000017447	-	55	70.270	ENSCCAG00000018540	-	60	69.399	Cebus_capucinus
ENSSMAG00000017447	-	55	79.891	ENSCCAG00000026018	-	56	88.158	Cebus_capucinus
ENSSMAG00000017447	-	55	79.891	ENSCATG00000030794	SRSF6	56	88.158	Cercocebus_atys
ENSSMAG00000017447	-	55	79.891	ENSCLAG00000010247	SRSF6	56	88.158	Chinchilla_lanigera
ENSSMAG00000017447	-	55	79.891	ENSCSAG00000014022	SRSF6	53	80.220	Chlorocebus_sabaeus
ENSSMAG00000017447	-	55	79.144	ENSCPBG00000018200	SRSF6	68	74.262	Chrysemys_picta_bellii
ENSSMAG00000017447	-	55	78.804	ENSCANG00000037774	-	53	79.121	Colobus_angolensis_palliatus
ENSSMAG00000017447	-	55	79.891	ENSCGRG00001022339	Srsf6	56	88.158	Cricetulus_griseus_chok1gshd
ENSSMAG00000017447	-	55	77.957	ENSDARG00000016783	srsf6b	80	90.789	Danio_rerio
ENSSMAG00000017447	-	55	79.891	ENSDNOG00000008410	SRSF6	53	80.220	Dasypus_novemcinctus
ENSSMAG00000017447	-	55	79.891	ENSDORG00000028378	Srsf6	56	88.158	Dipodomys_ordii
ENSSMAG00000017447	-	55	75.410	ENSETEG00000006221	SRSF6	52	75.691	Echinops_telfairi
ENSSMAG00000017447	-	55	80.435	ENSEASG00005023429	SRSF6	53	80.769	Equus_asinus_asinus
ENSSMAG00000017447	-	55	80.435	ENSECAG00000023932	SRSF6	56	80.769	Equus_caballus
ENSSMAG00000017447	-	54	83.889	ENSELUG00000013506	SRSF6	98	72.699	Esox_lucius
ENSSMAG00000017447	-	59	83.085	ENSELUG00000024182	SRSF6	90	79.675	Esox_lucius
ENSSMAG00000017447	-	55	80.435	ENSFCAG00000032814	SRSF6	53	80.769	Felis_catus
ENSSMAG00000017447	-	55	81.768	ENSFHEG00000023065	srsf6a	66	69.198	Fundulus_heteroclitus
ENSSMAG00000017447	-	95	57.880	ENSGMOG00000014458	srsf6a	66	78.455	Gadus_morhua
ENSSMAG00000017447	-	54	72.316	ENSGMOG00000006105	srsf6a	62	70.621	Gadus_morhua
ENSSMAG00000017447	-	55	77.957	ENSGALG00000000990	SRSF6	56	88.158	Gallus_gallus
ENSSMAG00000017447	-	55	82.065	ENSGACG00000006084	srsf6a	53	80.978	Gasterosteus_aculeatus
ENSSMAG00000017447	-	55	79.144	ENSGAGG00000003238	SRSF6	68	74.262	Gopherus_agassizii
ENSSMAG00000017447	-	55	79.891	ENSGGOG00000009808	SRSF6	56	88.158	Gorilla_gorilla
ENSSMAG00000017447	-	72	83.966	ENSHBUG00000006386	-	96	76.415	Haplochromis_burtoni
ENSSMAG00000017447	-	55	79.891	ENSHGLG00000007348	SRSF6	56	88.158	Heterocephalus_glaber_female
ENSSMAG00000017447	-	58	62.827	ENSHGLG00000007701	-	56	63.333	Heterocephalus_glaber_female
ENSSMAG00000017447	-	91	60.328	ENSHCOG00000002740	srsf6a	57	77.778	Hippocampus_comes
ENSSMAG00000017447	-	53	81.034	ENSIPUG00000016856	SRSF6	95	66.667	Ictalurus_punctatus
ENSSMAG00000017447	-	55	83.889	ENSIPUG00000004776	-	63	83.889	Ictalurus_punctatus
ENSSMAG00000017447	-	55	79.891	ENSSTOG00000010866	SRSF6	56	88.158	Ictidomys_tridecemlineatus
ENSSMAG00000017447	-	83	62.278	ENSKMAG00000011934	srsf6a	99	58.882	Kryptolebias_marmoratus
ENSSMAG00000017447	-	55	81.622	ENSLBEG00000007356	srsf6a	51	82.609	Labrus_bergylta
ENSSMAG00000017447	-	98	63.385	ENSLACG00000005466	SRSF6	54	80.220	Latimeria_chalumnae
ENSSMAG00000017447	-	55	79.891	ENSMFAG00000036925	SRSF6	56	88.158	Macaca_fascicularis
ENSSMAG00000017447	-	55	79.891	ENSMMUG00000006742	SRSF6	56	88.158	Macaca_mulatta
ENSSMAG00000017447	-	55	79.348	ENSMNEG00000038270	-	53	79.670	Macaca_nemestrina
ENSSMAG00000017447	-	55	79.348	ENSMNEG00000027392	-	56	86.842	Macaca_nemestrina
ENSSMAG00000017447	-	55	82.609	ENSMAMG00000017161	srsf6a	53	82.065	Mastacembelus_armatus
ENSSMAG00000017447	-	72	86.076	ENSMZEG00005008032	-	96	79.245	Maylandia_zebra
ENSSMAG00000017447	-	55	77.654	ENSMZEG00005020658	-	63	61.538	Maylandia_zebra
ENSSMAG00000017447	-	55	79.348	ENSMICG00000008537	SRSF6	56	88.158	Microcebus_murinus
ENSSMAG00000017447	-	55	78.919	ENSMODG00000003107	SRSF6	70	74.477	Monodelphis_domestica
ENSSMAG00000017447	-	55	79.891	MGP_CAROLIEiJ_G0024606	Srsf6	56	88.158	Mus_caroli
ENSSMAG00000017447	-	55	79.891	ENSMUSG00000016921	Srsf6	56	88.158	Mus_musculus
ENSSMAG00000017447	-	55	79.891	MGP_PahariEiJ_G0026050	Srsf6	56	88.158	Mus_pahari
ENSSMAG00000017447	-	55	79.891	MGP_SPRETEiJ_G0025528	Srsf6	56	88.158	Mus_spretus
ENSSMAG00000017447	-	55	80.435	ENSMPUG00000017692	SRSF6	63	80.769	Mustela_putorius_furo
ENSSMAG00000017447	-	55	55.024	ENSMLUG00000016618	SRSF6	53	57.143	Myotis_lucifugus
ENSSMAG00000017447	-	55	79.891	ENSNGAG00000017560	Srsf6	56	88.158	Nannospalax_galili
ENSSMAG00000017447	-	72	78.903	ENSNBRG00000014709	-	96	76.415	Neolamprologus_brichardi
ENSSMAG00000017447	-	55	82.514	ENSNBRG00000001846	-	65	70.902	Neolamprologus_brichardi
ENSSMAG00000017447	-	55	79.891	ENSNLEG00000006524	SRSF6	56	88.158	Nomascus_leucogenys
ENSSMAG00000017447	-	55	78.919	ENSMEUG00000014615	SRSF6	60	79.781	Notamacropus_eugenii
ENSSMAG00000017447	-	55	83.607	ENSONIG00000001925	-	68	75.820	Oreochromis_niloticus
ENSSMAG00000017447	-	72	78.682	ENSONIG00000020247	-	97	76.163	Oreochromis_niloticus
ENSSMAG00000017447	-	69	52.743	ENSOCUG00000009785	-	79	51.481	Oryctolagus_cuniculus
ENSSMAG00000017447	-	54	49.153	ENSOCUG00000023999	-	70	47.486	Oryctolagus_cuniculus
ENSSMAG00000017447	-	55	79.348	ENSOGAG00000014468	SRSF6	53	79.670	Otolemur_garnettii
ENSSMAG00000017447	-	55	75.956	ENSOARG00000003117	SRSF6	52	76.243	Ovis_aries
ENSSMAG00000017447	-	55	69.231	ENSPPAG00000043131	-	56	69.444	Pan_paniscus
ENSSMAG00000017447	-	55	79.348	ENSPPAG00000034327	-	53	79.670	Pan_paniscus
ENSSMAG00000017447	-	55	80.435	ENSPPRG00000008917	SRSF6	53	80.769	Panthera_pardus
ENSSMAG00000017447	-	55	79.891	ENSPTRG00000044686	-	56	88.158	Pan_troglodytes
ENSSMAG00000017447	-	55	69.231	ENSPTRG00000046274	-	56	69.444	Pan_troglodytes
ENSSMAG00000017447	-	55	79.891	ENSPANG00000035224	SRSF6	56	88.158	Papio_anubis
ENSSMAG00000017447	-	54	72.222	ENSPKIG00000015703	-	83	65.487	Paramormyrops_kingsleyae
ENSSMAG00000017447	-	89	67.224	ENSPKIG00000018463	-	75	89.474	Paramormyrops_kingsleyae
ENSSMAG00000017447	-	91	67.647	ENSPMGG00000014963	srsf6a	55	81.319	Periophthalmus_magnuspinnatus
ENSSMAG00000017447	-	89	61.538	ENSPCIG00000022430	-	52	64.961	Phascolarctos_cinereus
ENSSMAG00000017447	-	55	78.919	ENSPCIG00000003820	SRSF6	70	74.477	Phascolarctos_cinereus
ENSSMAG00000017447	-	55	78.919	ENSPLAG00000009243	srsf6a	79	75.397	Poecilia_latipinna
ENSSMAG00000017447	-	55	81.421	ENSPMEG00000006042	SRSF6	53	80.328	Poecilia_mexicana
ENSSMAG00000017447	-	55	79.891	ENSPPYG00000011019	SRSF6	53	80.220	Pongo_abelii
ENSSMAG00000017447	-	55	80.435	ENSPCAG00000010954	SRSF6	55	80.769	Procavia_capensis
ENSSMAG00000017447	-	55	79.348	ENSPCOG00000026364	SRSF6	56	88.158	Propithecus_coquereli
ENSSMAG00000017447	-	55	80.435	ENSPVAG00000015232	SRSF6	53	80.769	Pteropus_vampyrus
ENSSMAG00000017447	-	72	78.903	ENSPNYG00000004944	-	96	76.101	Pundamilia_nyererei
ENSSMAG00000017447	-	55	82.514	ENSPNYG00000011272	-	50	81.522	Pundamilia_nyererei
ENSSMAG00000017447	-	55	79.891	ENSRNOG00000006380	Srsf6	54	80.220	Rattus_norvegicus
ENSSMAG00000017447	-	55	79.121	ENSRBIG00000041414	SRSF6	58	88.158	Rhinopithecus_bieti
ENSSMAG00000017447	-	55	79.891	ENSRROG00000029989	SRSF6	56	88.158	Rhinopithecus_roxellana
ENSSMAG00000017447	-	55	79.891	ENSSBOG00000033708	-	56	88.158	Saimiri_boliviensis_boliviensis
ENSSMAG00000017447	-	55	66.667	ENSSBOG00000034078	-	54	62.105	Saimiri_boliviensis_boliviensis
ENSSMAG00000017447	-	55	78.919	ENSSHAG00000012805	SRSF6	69	74.468	Sarcophilus_harrisii
ENSSMAG00000017447	-	55	81.667	ENSSFOG00015015169	SRSF6	59	81.215	Scleropages_formosus
ENSSMAG00000017447	-	91	63.526	ENSSFOG00015019681	-	95	62.464	Scleropages_formosus
ENSSMAG00000017447	-	55	82.609	ENSSDUG00000016097	srsf6a	68	76.667	Seriola_dumerili
ENSSMAG00000017447	-	92	62.379	ENSSLDG00000022841	srsf6a	68	76.667	Seriola_lalandi_dorsalis
ENSSMAG00000017447	-	55	82.222	ENSSPUG00000004967	SRSF6	71	73.663	Sphenodon_punctatus
ENSSMAG00000017447	-	78	65.649	ENSSPAG00000002362	srsf6a	66	80.214	Stegastes_partitus
ENSSMAG00000017447	-	68	69.027	ENSSSCG00000007362	SRSF6	77	64.773	Sus_scrofa
ENSSMAG00000017447	-	55	79.781	ENSTGUG00000003455	SRSF6	53	79.235	Taeniopygia_guttata
ENSSMAG00000017447	-	91	64.169	ENSTNIG00000001692	srsf6a	73	74.167	Tetraodon_nigroviridis
ENSSMAG00000017447	-	55	80.435	ENSUAMG00000003559	SRSF6	56	89.474	Ursus_americanus
ENSSMAG00000017447	-	55	80.556	ENSXMAG00000021849	srsf6a	54	80.556	Xiphophorus_maculatus