EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000017485 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 4055 bases
Position: chr2:1278793-1282847
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000028553	zf-C2H2	PF00096.26	1.7e-32	1	4
ENSSMAP00000028553	zf-C2H2	PF00096.26	1.7e-32	2	4
ENSSMAP00000028553	zf-C2H2	PF00096.26	1.7e-32	3	4
ENSSMAP00000028553	zf-C2H2	PF00096.26	1.7e-32	4	4
ENSSMAP00000028553	zf-met	PF12874.7	1.4e-06	1	2
ENSSMAP00000028553	zf-met	PF12874.7	1.4e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000028906	-	3201	-	ENSSMAP00000028553	799 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000017485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000017485's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000017485	-	50	37.126	ENSSMAG00000007396	-	78	39.088
ENSSMAG00000017485	-	54	43.750	ENSSMAG00000006197	-	98	43.262
ENSSMAG00000017485	-	51	32.270	ENSSMAG00000014597	-	63	33.696
ENSSMAG00000017485	-	51	35.961	ENSSMAG00000019949	-	74	41.270
ENSSMAG00000017485	-	53	39.732	ENSSMAG00000014844	-	68	39.732
ENSSMAG00000017485	-	55	38.554	ENSSMAG00000021271	-	67	35.673
ENSSMAG00000017485	-	54	35.714	ENSSMAG00000015356	-	76	50.617
ENSSMAG00000017485	-	50	30.903	ENSSMAG00000008308	-	67	37.278
ENSSMAG00000017485	-	52	41.026	ENSSMAG00000012378	znf646	76	36.975
ENSSMAG00000017485	-	52	41.135	ENSSMAG00000003594	-	85	39.865
ENSSMAG00000017485	-	51	36.735	ENSSMAG00000009115	-	94	48.000
ENSSMAG00000017485	-	78	49.254	ENSSMAG00000017494	-	77	49.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000017485	-	72	48.889	ENSAPOG00000016137	-	92	47.674	Acanthochromis_polyacanthus
ENSSMAG00000017485	-	58	38.889	ENSAPOG00000005259	-	83	39.535	Acanthochromis_polyacanthus
ENSSMAG00000017485	-	55	36.364	ENSACIG00000023212	-	88	36.870	Amphilophus_citrinellus
ENSSMAG00000017485	-	51	39.320	ENSACIG00000009717	-	87	36.390	Amphilophus_citrinellus
ENSSMAG00000017485	-	54	38.835	ENSAOCG00000013978	-	89	39.446	Amphiprion_ocellaris
ENSSMAG00000017485	-	52	39.159	ENSAPEG00000012217	-	64	39.159	Amphiprion_percula
ENSSMAG00000017485	-	53	38.710	ENSAPEG00000013550	-	94	45.070	Amphiprion_percula
ENSSMAG00000017485	-	52	33.735	ENSACLG00000017621	-	56	33.735	Astatotilapia_calliptera
ENSSMAG00000017485	-	50	32.374	ENSCSAVG00000006745	-	99	31.206	Ciona_savignyi
ENSSMAG00000017485	-	50	36.422	ENSEBUG00000015456	-	93	36.422	Eptatretus_burgeri
ENSSMAG00000017485	-	52	43.548	ENSFHEG00000013820	-	62	39.592	Fundulus_heteroclitus
ENSSMAG00000017485	-	52	40.625	ENSFHEG00000013302	-	79	40.467	Fundulus_heteroclitus
ENSSMAG00000017485	-	53	37.107	ENSFHEG00000017989	-	75	38.209	Fundulus_heteroclitus
ENSSMAG00000017485	-	53	43.525	ENSFHEG00000005983	-	61	43.525	Fundulus_heteroclitus
ENSSMAG00000017485	-	53	52.632	ENSFHEG00000021003	-	83	52.632	Fundulus_heteroclitus
ENSSMAG00000017485	-	53	39.359	ENSFHEG00000003405	-	78	39.645	Fundulus_heteroclitus
ENSSMAG00000017485	-	59	41.791	ENSGAFG00000014188	-	99	39.929	Gambusia_affinis
ENSSMAG00000017485	-	53	40.876	ENSGAFG00000011999	-	73	40.876	Gambusia_affinis
ENSSMAG00000017485	-	57	36.519	ENSIPUG00000019205	-	77	36.691	Ictalurus_punctatus
ENSSMAG00000017485	-	53	33.969	ENSKMAG00000009682	-	73	36.224	Kryptolebias_marmoratus
ENSSMAG00000017485	-	58	38.542	ENSLACG00000017381	-	99	38.542	Latimeria_chalumnae
ENSSMAG00000017485	-	52	34.564	ENSLOCG00000016466	-	97	35.380	Lepisosteus_oculatus
ENSSMAG00000017485	-	53	32.609	ENSMAMG00000000789	-	74	34.343	Mastacembelus_armatus
ENSSMAG00000017485	-	54	33.569	ENSMALG00000009834	-	69	33.569	Monopterus_albus
ENSSMAG00000017485	-	54	37.963	ENSNBRG00000006757	-	71	37.963	Neolamprologus_brichardi
ENSSMAG00000017485	-	53	35.689	ENSORLG00000024399	-	90	37.982	Oryzias_latipes
ENSSMAG00000017485	-	53	37.952	ENSORLG00000027982	-	98	37.714	Oryzias_latipes
ENSSMAG00000017485	-	54	39.583	ENSORLG00000024652	-	96	38.140	Oryzias_latipes
ENSSMAG00000017485	-	51	40.323	ENSORLG00000027186	-	85	40.702	Oryzias_latipes
ENSSMAG00000017485	-	51	36.478	ENSORLG00000025717	-	88	38.732	Oryzias_latipes
ENSSMAG00000017485	-	52	32.243	ENSORLG00000028567	-	74	35.714	Oryzias_latipes
ENSSMAG00000017485	-	56	38.166	ENSORLG00000030630	-	85	38.514	Oryzias_latipes
ENSSMAG00000017485	-	51	37.396	ENSORLG00000027822	-	93	40.945	Oryzias_latipes
ENSSMAG00000017485	-	53	36.306	ENSORLG00000028323	-	92	40.373	Oryzias_latipes
ENSSMAG00000017485	-	53	33.178	ENSORLG00000029027	-	95	55.000	Oryzias_latipes
ENSSMAG00000017485	-	54	40.678	ENSORLG00020010560	-	99	38.246	Oryzias_latipes_hni
ENSSMAG00000017485	-	52	41.748	ENSORLG00020010171	-	97	34.568	Oryzias_latipes_hni
ENSSMAG00000017485	-	55	35.714	ENSORLG00020009857	-	93	38.947	Oryzias_latipes_hni
ENSSMAG00000017485	-	52	39.370	ENSORLG00020011075	-	75	37.828	Oryzias_latipes_hni
ENSSMAG00000017485	-	53	37.574	ENSORLG00020009943	-	99	39.446	Oryzias_latipes_hni
ENSSMAG00000017485	-	53	36.023	ENSORLG00020017164	-	93	52.326	Oryzias_latipes_hni
ENSSMAG00000017485	-	54	41.954	ENSORLG00020008891	-	86	42.667	Oryzias_latipes_hni
ENSSMAG00000017485	-	53	39.146	ENSORLG00015016558	-	82	37.658	Oryzias_latipes_hsok
ENSSMAG00000017485	-	51	40.435	ENSORLG00015013102	-	94	38.869	Oryzias_latipes_hsok
ENSSMAG00000017485	-	51	39.159	ENSORLG00015007920	-	97	46.988	Oryzias_latipes_hsok
ENSSMAG00000017485	-	53	40.727	ENSORLG00015012892	-	89	38.871	Oryzias_latipes_hsok
ENSSMAG00000017485	-	54	41.667	ENSORLG00015011730	-	97	41.637	Oryzias_latipes_hsok
ENSSMAG00000017485	-	53	36.050	ENSORLG00015013160	-	97	36.842	Oryzias_latipes_hsok
ENSSMAG00000017485	-	53	38.123	ENSORLG00015012776	-	93	52.459	Oryzias_latipes_hsok
ENSSMAG00000017485	-	59	37.768	ENSORLG00015012339	-	93	46.154	Oryzias_latipes_hsok
ENSSMAG00000017485	-	53	37.676	ENSOMEG00000014882	-	78	37.943	Oryzias_melastigma
ENSSMAG00000017485	-	53	39.910	ENSOMEG00000010638	-	89	38.851	Oryzias_melastigma
ENSSMAG00000017485	-	53	39.300	ENSOMEG00000019379	-	92	40.058	Oryzias_melastigma
ENSSMAG00000017485	-	51	37.815	ENSOMEG00000019519	-	92	40.741	Oryzias_melastigma
ENSSMAG00000017485	-	51	36.950	ENSOMEG00000016295	-	77	36.950	Oryzias_melastigma
ENSSMAG00000017485	-	51	38.119	ENSOMEG00000012621	-	86	38.119	Oryzias_melastigma
ENSSMAG00000017485	-	54	37.729	ENSOMEG00000019336	-	93	37.729	Oryzias_melastigma
ENSSMAG00000017485	-	54	36.709	ENSOMEG00000013868	-	69	37.135	Oryzias_melastigma
ENSSMAG00000017485	-	52	43.103	ENSOMEG00000012263	-	74	42.735	Oryzias_melastigma
ENSSMAG00000017485	-	51	42.238	ENSOMEG00000015103	-	90	42.424	Oryzias_melastigma
ENSSMAG00000017485	-	54	37.624	ENSOMEG00000017245	-	76	39.655	Oryzias_melastigma
ENSSMAG00000017485	-	51	36.982	ENSOMEG00000009816	-	100	41.176	Oryzias_melastigma
ENSSMAG00000017485	-	58	35.806	ENSOMEG00000013386	-	64	37.121	Oryzias_melastigma
ENSSMAG00000017485	-	54	37.580	ENSOMEG00000013677	-	84	37.908	Oryzias_melastigma
ENSSMAG00000017485	-	51	39.640	ENSOMEG00000019179	-	97	35.955	Oryzias_melastigma
ENSSMAG00000017485	-	50	34.343	ENSOMEG00000018691	-	92	40.996	Oryzias_melastigma
ENSSMAG00000017485	-	59	40.698	ENSOMEG00000012844	-	98	38.953	Oryzias_melastigma
ENSSMAG00000017485	-	51	38.150	ENSOMEG00000009568	-	99	41.935	Oryzias_melastigma
ENSSMAG00000017485	-	51	40.678	ENSOMEG00000016747	-	92	40.678	Oryzias_melastigma
ENSSMAG00000017485	-	50	37.658	ENSOMEG00000019220	-	77	37.658	Oryzias_melastigma
ENSSMAG00000017485	-	51	41.706	ENSPLAG00000008529	-	99	40.984	Poecilia_latipinna
ENSSMAG00000017485	-	58	38.941	ENSPMEG00000022667	-	88	39.706	Poecilia_mexicana
ENSSMAG00000017485	-	55	36.585	ENSPMEG00000022687	-	88	35.256	Poecilia_mexicana
ENSSMAG00000017485	-	55	39.831	ENSXCOG00000003530	-	95	39.831	Xiphophorus_couchianus
ENSSMAG00000017485	-	67	33.431	ENSXMAG00000028978	-	94	37.243	Xiphophorus_maculatus