EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000017494 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 7192 bases
Position: chr2:1283335-1290526
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000028569	zf-C2H2	PF00096.26	6e-45	1	7
ENSSMAP00000028569	zf-C2H2	PF00096.26	6e-45	2	7
ENSSMAP00000028569	zf-C2H2	PF00096.26	6e-45	3	7
ENSSMAP00000028569	zf-C2H2	PF00096.26	6e-45	4	7
ENSSMAP00000028569	zf-C2H2	PF00096.26	6e-45	5	7
ENSSMAP00000028569	zf-C2H2	PF00096.26	6e-45	6	7
ENSSMAP00000028569	zf-C2H2	PF00096.26	6e-45	7	7
ENSSMAP00000028569	zf-met	PF12874.7	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000028922	-	4669	-	ENSSMAP00000028569	882 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000017494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000017494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000017494	-	57	43.023	ENSSMAG00000006155	-	68	43.023
ENSSMAG00000017494	-	52	32.883	ENSSMAG00000018844	prdm5	87	34.524
ENSSMAG00000017494	-	52	34.500	ENSSMAG00000005081	-	83	35.650
ENSSMAG00000017494	-	51	40.909	ENSSMAG00000009609	-	96	43.810
ENSSMAG00000017494	-	77	49.254	ENSSMAG00000017485	-	78	49.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000017494	-	78	56.747	ENSCVAG00000018507	-	98	57.069	Cyprinodon_variegatus
ENSSMAG00000017494	-	100	60.570	ENSMAMG00000009817	-	96	60.526	Mastacembelus_armatus
ENSSMAG00000017494	-	68	44.685	ENSOMEG00000021420	-	99	45.091	Oryzias_melastigma
ENSSMAG00000017494	-	71	48.577	ENSPREG00000014898	-	90	48.577	Poecilia_reticulata
ENSSMAG00000017494	-	100	70.575	ENSSDUG00000000496	-	98	70.465	Seriola_dumerili
ENSSMAG00000017494	-	55	45.575	ENSTRUG00000001268	-	96	41.558	Takifugu_rubripes