EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000017550 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 6981 bases
Position: chr15:16391517-16398497
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000028679	DUF2465	PF10239.9	5.2e-125	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000029032	-	2590	-	ENSSMAP00000028679	515 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000017550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000017550's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000017550	-	55	32.903	ENSSMAG00000016618	-	79	31.849
ENSSMAG00000017550	-	62	48.910	ENSSMAG00000018911	fam98b	87	48.758

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000017550	-	100	80.233	ENSAPOG00000008610	-	100	82.466	Acanthochromis_polyacanthus
ENSSMAG00000017550	-	100	79.417	ENSACIG00000010408	-	99	80.116	Amphilophus_citrinellus
ENSSMAG00000017550	-	100	81.942	ENSAPEG00000008140	-	100	83.815	Amphiprion_percula
ENSSMAG00000017550	-	100	86.240	ENSATEG00000005828	-	100	84.302	Anabas_testudineus
ENSSMAG00000017550	-	100	75.483	ENSACLG00000013245	-	100	79.806	Astatotilapia_calliptera
ENSSMAG00000017550	-	70	77.231	ENSCSAG00000011860	-	74	75.424	Chlorocebus_sabaeus
ENSSMAG00000017550	-	100	82.115	ENSCSEG00000016455	-	100	80.539	Cynoglossus_semilaevis
ENSSMAG00000017550	-	86	77.602	ENSFHEG00000010992	-	100	76.471	Fundulus_heteroclitus
ENSSMAG00000017550	-	100	75.483	ENSMZEG00005018771	-	100	79.806	Maylandia_zebra
ENSSMAG00000017550	-	63	76.923	ENSNGAG00000000323	-	99	66.538	Nannospalax_galili
ENSSMAG00000017550	-	100	78.447	ENSNBRG00000021034	-	99	79.029	Neolamprologus_brichardi
ENSSMAG00000017550	-	100	73.938	ENSORLG00000028435	-	99	70.270	Oryzias_latipes
ENSSMAG00000017550	-	100	75.290	ENSPNYG00000002709	-	99	79.612	Pundamilia_nyererei
ENSSMAG00000017550	-	63	76.923	ENSSHAG00000014263	-	99	66.795	Sarcophilus_harrisii
ENSSMAG00000017550	-	100	87.214	ENSSDUG00000022080	-	100	86.667	Seriola_dumerili
ENSSMAG00000017550	-	100	84.674	ENSSLDG00000011581	-	99	84.704	Seriola_lalandi_dorsalis
ENSSMAG00000017550	-	100	81.589	ENSSPAG00000014058	-	100	83.527	Stegastes_partitus
ENSSMAG00000017550	-	57	80.405	ENSTRUG00000003148	-	95	81.787	Takifugu_rubripes