EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000017736 (Gene tree)
Gene ID: -
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 17171 bases
Position: chr3:14350728-14367898
Accession: ZDB-GENE-030131-577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000029323	RRM_4	PF10598.9	3.2e-48	1	1
ENSSMAP00000029220	RRM_4	PF10598.9	3.3e-48	1	1
ENSSMAP00000029220	U5_2-snRNA_bdg	PF10597.9	7.7e-74	1	1
ENSSMAP00000029323	U5_2-snRNA_bdg	PF10597.9	2.7e-66	1	1
ENSSMAP00000029323	PRO8NT	PF08082.11	1.8e-86	1	1
ENSSMAP00000029220	PRO8NT	PF08082.11	1.8e-86	1	1
ENSSMAP00000029220	U6-snRNA_bdg	PF10596.9	1.9e-89	1	1
ENSSMAP00000029323	U6-snRNA_bdg	PF10596.9	1.9e-89	1	1
ENSSMAP00000029323	PROCN	PF08083.11	3.4e-235	1	1
ENSSMAP00000029220	PROCN	PF08083.11	3.4e-235	1	1
ENSSMAP00000029220	PRP8_domainIV	PF12134.8	4.5e-130	1	1
ENSSMAP00000029323	PRP8_domainIV	PF12134.8	4.5e-130	1	1
ENSSMAP00000029220	PROCT	PF08084.11	2.7e-53	1	1
ENSSMAP00000029323	PROCT	PF08084.11	2.7e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000029685	-	6981	-	ENSSMAP00000029323	2326 (aa)	-	-
ENSSMAT00000029580	-	8293	-	ENSSMAP00000029220	2338 (aa)	-	A0A2U9B535

Gene Model

Click here to download ENSSMAG00000017736's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000017736's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000017736	prpf8	100	97.394	ENSG00000174231	PRPF8	100	97.394	Homo_sapiens
ENSSMAG00000017736	prpf8	100	99.487	ENSAPOG00000010079	prpf8	100	99.487	Acanthochromis_polyacanthus
ENSSMAG00000017736	prpf8	100	97.394	ENSAMEG00000007940	PRPF8	100	97.394	Ailuropoda_melanoleuca
ENSSMAG00000017736	prpf8	100	97.240	ENSACIG00000018280	prpf8	100	97.240	Amphilophus_citrinellus
ENSSMAG00000017736	prpf8	100	99.444	ENSAOCG00000010725	prpf8	100	99.444	Amphiprion_ocellaris
ENSSMAG00000017736	prpf8	100	99.444	ENSAPEG00000014397	prpf8	100	99.444	Amphiprion_percula
ENSSMAG00000017736	prpf8	100	98.589	ENSATEG00000010062	prpf8	100	98.589	Anabas_testudineus
ENSSMAG00000017736	prpf8	96	98.043	ENSAPLG00000010357	PRPF8	100	98.043	Anas_platyrhynchos
ENSSMAG00000017736	prpf8	83	95.979	ENSACAG00000014784	PRPF8	99	95.979	Anolis_carolinensis
ENSSMAG00000017736	prpf8	100	97.394	ENSANAG00000032629	PRPF8	100	97.394	Aotus_nancymaae
ENSSMAG00000017736	prpf8	100	98.596	ENSACLG00000020858	prpf8	100	98.596	Astatotilapia_calliptera
ENSSMAG00000017736	prpf8	100	98.845	ENSAMXG00000020291	prpf8	100	98.845	Astyanax_mexicanus
ENSSMAG00000017736	prpf8	100	97.394	ENSBTAG00000011488	PRPF8	100	97.394	Bos_taurus
ENSSMAG00000017736	prpf8	99	86.099	WBGene00004187	prp-8	99	86.938	Caenorhabditis_elegans
ENSSMAG00000017736	prpf8	100	97.394	ENSCJAG00000001911	PRPF8	100	97.394	Callithrix_jacchus
ENSSMAG00000017736	prpf8	100	97.394	ENSCAFG00000019221	PRPF8	100	97.394	Canis_familiaris
ENSSMAG00000017736	prpf8	96	97.992	ENSCAFG00020009943	PRPF8	100	97.992	Canis_lupus_dingo
ENSSMAG00000017736	prpf8	100	97.394	ENSCHIG00000017499	PRPF8	100	97.394	Capra_hircus
ENSSMAG00000017736	prpf8	100	97.394	ENSTSYG00000014120	PRPF8	100	97.394	Carlito_syrichta
ENSSMAG00000017736	prpf8	96	95.768	ENSCAPG00000009459	PRPF8	99	95.768	Cavia_aperea
ENSSMAG00000017736	prpf8	100	97.394	ENSCPOG00000010379	PRPF8	100	97.394	Cavia_porcellus
ENSSMAG00000017736	prpf8	100	97.394	ENSCCAG00000031983	-	100	97.394	Cebus_capucinus
ENSSMAG00000017736	prpf8	100	97.394	ENSCATG00000038595	PRPF8	100	97.394	Cercocebus_atys
ENSSMAG00000017736	prpf8	100	97.394	ENSCLAG00000004388	PRPF8	100	97.394	Chinchilla_lanigera
ENSSMAG00000017736	prpf8	100	97.394	ENSCSAG00000013929	PRPF8	100	97.394	Chlorocebus_sabaeus
ENSSMAG00000017736	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSSMAG00000017736	prpf8	100	97.562	ENSCPBG00000020409	PRPF8	100	97.562	Chrysemys_picta_bellii
ENSSMAG00000017736	prpf8	98	92.857	ENSCSAVG00000007825	-	100	91.065	Ciona_savignyi
ENSSMAG00000017736	prpf8	100	97.394	ENSCANG00000043088	PRPF8	100	97.394	Colobus_angolensis_palliatus
ENSSMAG00000017736	prpf8	73	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSSMAG00000017736	prpf8	100	99.188	ENSCSEG00000007905	prpf8	100	99.188	Cynoglossus_semilaevis
ENSSMAG00000017736	prpf8	100	98.804	ENSDARG00000026180	prpf8	100	98.804	Danio_rerio
ENSSMAG00000017736	prpf8	93	97.521	ENSDNOG00000018471	PRPF8	99	97.521	Dasypus_novemcinctus
ENSSMAG00000017736	prpf8	84	95.901	ENSDORG00000006185	Prpf8	96	95.901	Dipodomys_ordii
ENSSMAG00000017736	prpf8	99	91.353	FBgn0033688	Prp8	97	91.879	Drosophila_melanogaster
ENSSMAG00000017736	prpf8	100	92.183	ENSETEG00000017592	PRPF8	100	92.183	Echinops_telfairi
ENSSMAG00000017736	prpf8	99	93.391	ENSEBUG00000006548	prpf8	99	93.487	Eptatretus_burgeri
ENSSMAG00000017736	prpf8	100	97.394	ENSEASG00005009514	PRPF8	100	97.394	Equus_asinus_asinus
ENSSMAG00000017736	prpf8	97	98.022	ENSECAG00000021318	PRPF8	100	98.022	Equus_caballus
ENSSMAG00000017736	prpf8	67	98.519	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSSMAG00000017736	prpf8	98	97.771	ENSELUG00000007120	prpf8	99	97.771	Esox_lucius
ENSSMAG00000017736	prpf8	100	97.394	ENSFCAG00000006297	PRPF8	100	97.394	Felis_catus
ENSSMAG00000017736	prpf8	100	97.648	ENSFALG00000006628	PRPF8	100	97.648	Ficedula_albicollis
ENSSMAG00000017736	prpf8	100	97.394	ENSFDAG00000004711	PRPF8	100	97.394	Fukomys_damarensis
ENSSMAG00000017736	prpf8	100	98.548	ENSFHEG00000021084	prpf8	100	98.548	Fundulus_heteroclitus
ENSSMAG00000017736	prpf8	100	96.954	ENSGMOG00000002028	prpf8	99	96.954	Gadus_morhua
ENSSMAG00000017736	prpf8	100	97.648	ENSGALG00000002943	PRPF8	100	97.648	Gallus_gallus
ENSSMAG00000017736	prpf8	99	98.715	ENSGAFG00000010337	prpf8	99	98.715	Gambusia_affinis
ENSSMAG00000017736	prpf8	100	99.187	ENSGACG00000008504	prpf8	100	99.187	Gasterosteus_aculeatus
ENSSMAG00000017736	prpf8	100	97.605	ENSGAGG00000008350	PRPF8	100	97.605	Gopherus_agassizii
ENSSMAG00000017736	prpf8	100	97.394	ENSGGOG00000005516	PRPF8	100	97.394	Gorilla_gorilla
ENSSMAG00000017736	prpf8	100	98.845	ENSHBUG00000016192	prpf8	100	98.845	Haplochromis_burtoni
ENSSMAG00000017736	prpf8	100	97.394	ENSHGLG00000012029	PRPF8	100	97.394	Heterocephalus_glaber_female
ENSSMAG00000017736	prpf8	100	97.394	ENSHGLG00100016494	PRPF8	100	97.394	Heterocephalus_glaber_male
ENSSMAG00000017736	prpf8	100	98.931	ENSHCOG00000016414	prpf8	100	98.931	Hippocampus_comes
ENSSMAG00000017736	prpf8	100	98.888	ENSIPUG00000023230	prpf8	100	98.888	Ictalurus_punctatus
ENSSMAG00000017736	prpf8	100	97.394	ENSSTOG00000005128	PRPF8	100	97.394	Ictidomys_tridecemlineatus
ENSSMAG00000017736	prpf8	100	95.258	ENSJJAG00000021159	Prpf8	100	95.258	Jaculus_jaculus
ENSSMAG00000017736	prpf8	99	98.970	ENSKMAG00000016118	prpf8	99	98.970	Kryptolebias_marmoratus
ENSSMAG00000017736	prpf8	100	99.401	ENSLBEG00000026903	prpf8	100	99.401	Labrus_bergylta
ENSSMAG00000017736	prpf8	95	95.356	ENSLACG00000010479	PRPF8	99	98.116	Latimeria_chalumnae
ENSSMAG00000017736	prpf8	99	98.504	ENSLOCG00000005409	prpf8	99	98.504	Lepisosteus_oculatus
ENSSMAG00000017736	prpf8	100	97.394	ENSLAFG00000015445	PRPF8	100	97.394	Loxodonta_africana
ENSSMAG00000017736	prpf8	100	97.394	ENSMFAG00000039995	PRPF8	100	97.394	Macaca_fascicularis
ENSSMAG00000017736	prpf8	100	97.394	ENSMMUG00000004820	PRPF8	100	97.394	Macaca_mulatta
ENSSMAG00000017736	prpf8	100	97.394	ENSMNEG00000035713	PRPF8	100	97.394	Macaca_nemestrina
ENSSMAG00000017736	prpf8	100	97.394	ENSMLEG00000037937	PRPF8	100	97.394	Mandrillus_leucophaeus
ENSSMAG00000017736	prpf8	100	99.230	ENSMAMG00000008919	prpf8	100	99.230	Mastacembelus_armatus
ENSSMAG00000017736	prpf8	100	98.596	ENSMZEG00005015073	prpf8	100	98.596	Maylandia_zebra
ENSSMAG00000017736	prpf8	100	97.648	ENSMGAG00000004769	PRPF8	100	97.648	Meleagris_gallopavo
ENSSMAG00000017736	prpf8	100	97.394	ENSMICG00000010320	PRPF8	100	97.394	Microcebus_murinus
ENSSMAG00000017736	prpf8	100	97.394	ENSMOCG00000016838	Prpf8	100	97.394	Microtus_ochrogaster
ENSSMAG00000017736	prpf8	100	98.802	ENSMMOG00000011887	prpf8	100	98.802	Mola_mola
ENSSMAG00000017736	prpf8	100	97.394	ENSMODG00000010480	PRPF8	100	97.394	Monodelphis_domestica
ENSSMAG00000017736	prpf8	98	98.445	ENSMALG00000003558	prpf8	100	98.445	Monopterus_albus
ENSSMAG00000017736	prpf8	100	97.352	MGP_CAROLIEiJ_G0016740	Prpf8	100	97.352	Mus_caroli
ENSSMAG00000017736	prpf8	100	97.352	ENSMUSG00000020850	Prpf8	100	97.352	Mus_musculus
ENSSMAG00000017736	prpf8	100	97.309	MGP_PahariEiJ_G0017877	Prpf8	100	97.309	Mus_pahari
ENSSMAG00000017736	prpf8	100	97.352	MGP_SPRETEiJ_G0017583	Prpf8	100	97.352	Mus_spretus
ENSSMAG00000017736	prpf8	100	97.394	ENSMPUG00000013227	PRPF8	100	97.394	Mustela_putorius_furo
ENSSMAG00000017736	prpf8	100	97.270	ENSMLUG00000002666	PRPF8	100	97.270	Myotis_lucifugus
ENSSMAG00000017736	prpf8	100	95.643	ENSNGAG00000005305	Prpf8	100	95.643	Nannospalax_galili
ENSSMAG00000017736	prpf8	100	98.638	ENSNBRG00000013127	prpf8	100	98.638	Neolamprologus_brichardi
ENSSMAG00000017736	prpf8	97	96.760	ENSNLEG00000000897	PRPF8	98	96.760	Nomascus_leucogenys
ENSSMAG00000017736	prpf8	98	96.176	ENSMEUG00000015999	PRPF8	100	96.176	Notamacropus_eugenii
ENSSMAG00000017736	prpf8	100	95.643	ENSOPRG00000003102	PRPF8	100	95.595	Ochotona_princeps
ENSSMAG00000017736	prpf8	100	97.394	ENSODEG00000008468	PRPF8	100	97.394	Octodon_degus
ENSSMAG00000017736	prpf8	100	98.596	ENSONIG00000008153	prpf8	100	98.596	Oreochromis_niloticus
ENSSMAG00000017736	prpf8	82	99.252	ENSOANG00000004250	PRPF8	97	99.252	Ornithorhynchus_anatinus
ENSSMAG00000017736	prpf8	100	97.394	ENSOCUG00000000081	PRPF8	100	97.394	Oryctolagus_cuniculus
ENSSMAG00000017736	prpf8	100	98.301	ENSORLG00000008036	prpf8	100	98.301	Oryzias_latipes
ENSSMAG00000017736	prpf8	100	98.259	ENSORLG00020021070	prpf8	100	98.259	Oryzias_latipes_hni
ENSSMAG00000017736	prpf8	100	98.301	ENSORLG00015002340	prpf8	100	98.301	Oryzias_latipes_hsok
ENSSMAG00000017736	prpf8	100	96.686	ENSOMEG00000016866	prpf8	100	96.686	Oryzias_melastigma
ENSSMAG00000017736	prpf8	100	97.270	ENSOARG00000013312	PRPF8	100	97.270	Ovis_aries
ENSSMAG00000017736	prpf8	100	97.394	ENSPPAG00000042753	PRPF8	100	97.394	Pan_paniscus
ENSSMAG00000017736	prpf8	100	97.394	ENSPPRG00000008746	PRPF8	100	97.394	Panthera_pardus
ENSSMAG00000017736	prpf8	100	97.309	ENSPTIG00000019200	PRPF8	100	97.309	Panthera_tigris_altaica
ENSSMAG00000017736	prpf8	100	97.394	ENSPTRG00000039576	PRPF8	100	97.394	Pan_troglodytes
ENSSMAG00000017736	prpf8	98	98.002	ENSPANG00000024607	PRPF8	98	98.002	Papio_anubis
ENSSMAG00000017736	prpf8	100	98.465	ENSPKIG00000011201	prpf8	100	98.465	Paramormyrops_kingsleyae
ENSSMAG00000017736	prpf8	100	97.519	ENSPSIG00000013393	PRPF8	100	97.519	Pelodiscus_sinensis
ENSSMAG00000017736	prpf8	100	97.394	ENSPEMG00000021699	Prpf8	100	97.394	Peromyscus_maniculatus_bairdii
ENSSMAG00000017736	prpf8	96	93.675	ENSPMAG00000005438	prpf8	100	93.719	Petromyzon_marinus
ENSSMAG00000017736	prpf8	100	97.394	ENSPCIG00000022603	PRPF8	100	97.992	Phascolarctos_cinereus
ENSSMAG00000017736	prpf8	100	97.964	ENSPFOG00000007005	prpf8	100	97.964	Poecilia_formosa
ENSSMAG00000017736	prpf8	100	97.134	ENSPLAG00000020777	prpf8	100	97.134	Poecilia_latipinna
ENSSMAG00000017736	prpf8	100	97.964	ENSPMEG00000004051	prpf8	100	97.964	Poecilia_mexicana
ENSSMAG00000017736	prpf8	100	98.717	ENSPREG00000021902	prpf8	100	98.717	Poecilia_reticulata
ENSSMAG00000017736	prpf8	100	97.394	ENSPPYG00000007777	PRPF8	100	97.394	Pongo_abelii
ENSSMAG00000017736	prpf8	90	96.782	ENSPCAG00000008938	PRPF8	90	96.782	Procavia_capensis
ENSSMAG00000017736	prpf8	100	97.394	ENSPCOG00000015182	PRPF8	100	97.394	Propithecus_coquereli
ENSSMAG00000017736	prpf8	93	98.448	ENSPVAG00000002134	PRPF8	93	98.448	Pteropus_vampyrus
ENSSMAG00000017736	prpf8	100	98.845	ENSPNYG00000016356	prpf8	100	98.845	Pundamilia_nyererei
ENSSMAG00000017736	prpf8	100	98.888	ENSPNAG00000009247	prpf8	100	98.888	Pygocentrus_nattereri
ENSSMAG00000017736	prpf8	100	97.352	ENSRNOG00000003495	Prpf8	100	97.352	Rattus_norvegicus
ENSSMAG00000017736	prpf8	100	97.394	ENSRBIG00000031219	PRPF8	100	97.546	Rhinopithecus_bieti
ENSSMAG00000017736	prpf8	100	97.394	ENSRROG00000038014	PRPF8	100	97.546	Rhinopithecus_roxellana
ENSSMAG00000017736	prpf8	99	62.430	YHR165C	PRP8	95	62.516	Saccharomyces_cerevisiae
ENSSMAG00000017736	prpf8	100	97.394	ENSSBOG00000029717	PRPF8	100	97.394	Saimiri_boliviensis_boliviensis
ENSSMAG00000017736	prpf8	100	97.352	ENSSHAG00000006167	PRPF8	100	97.352	Sarcophilus_harrisii
ENSSMAG00000017736	prpf8	100	98.377	ENSSFOG00015013905	prpf8	100	98.377	Scleropages_formosus
ENSSMAG00000017736	prpf8	100	99.487	ENSSDUG00000003029	prpf8	100	99.487	Seriola_dumerili
ENSSMAG00000017736	prpf8	68	99.875	ENSSLDG00000017096	prpf8	100	99.875	Seriola_lalandi_dorsalis
ENSSMAG00000017736	prpf8	87	94.553	ENSSARG00000002892	PRPF8	87	94.553	Sorex_araneus
ENSSMAG00000017736	prpf8	100	97.648	ENSSPUG00000007463	PRPF8	100	97.648	Sphenodon_punctatus
ENSSMAG00000017736	prpf8	100	98.888	ENSSPAG00000015639	prpf8	100	98.888	Stegastes_partitus
ENSSMAG00000017736	prpf8	100	97.394	ENSSSCG00000017817	PRPF8	100	97.394	Sus_scrofa
ENSSMAG00000017736	prpf8	52	98.778	ENSTGUG00000015597	-	95	98.778	Taeniopygia_guttata
ENSSMAG00000017736	prpf8	100	97.648	ENSTGUG00000005648	-	100	97.648	Taeniopygia_guttata
ENSSMAG00000017736	prpf8	100	98.888	ENSTRUG00000015906	prpf8	100	98.888	Takifugu_rubripes
ENSSMAG00000017736	prpf8	95	99.582	ENSTNIG00000003460	prpf8	99	99.582	Tetraodon_nigroviridis
ENSSMAG00000017736	prpf8	93	98.775	ENSTBEG00000006431	PRPF8	93	98.775	Tupaia_belangeri
ENSSMAG00000017736	prpf8	100	96.796	ENSTTRG00000006869	PRPF8	100	96.796	Tursiops_truncatus
ENSSMAG00000017736	prpf8	54	95.968	ENSUAMG00000015644	-	96	95.354	Ursus_americanus
ENSSMAG00000017736	prpf8	100	97.138	ENSUMAG00000009385	PRPF8	100	97.138	Ursus_maritimus
ENSSMAG00000017736	prpf8	72	97.931	ENSVPAG00000006063	-	71	97.931	Vicugna_pacos
ENSSMAG00000017736	prpf8	100	97.394	ENSVVUG00000021695	PRPF8	99	97.394	Vulpes_vulpes
ENSSMAG00000017736	prpf8	100	97.606	ENSXETG00000022259	prpf8	100	97.606	Xenopus_tropicalis
ENSSMAG00000017736	prpf8	100	98.676	ENSXCOG00000012775	prpf8	100	98.676	Xiphophorus_couchianus
ENSSMAG00000017736	prpf8	100	98.718	ENSXMAG00000008505	prpf8	100	98.718	Xiphophorus_maculatus