EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000017738 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2%2C subunit C
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 4861 bases
Position: chr13:10168379-10173239
Accession: ZDB-GENE-030131-2469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000028957	RNase_H2_suC	PF08615.11	3e-19	1	1
ENSSMAP00000028949	RNase_H2_suC	PF08615.11	8.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000029309	-	635	-	ENSSMAP00000028949	161 (aa)	-	-
ENSSMAT00000029316	-	2658	-	ENSSMAP00000028957	136 (aa)	-	A0A2U9C5T9

Gene Model

Click here to download ENSSMAG00000017738's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000017738's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000017738	rnaseh2c	100	90.441	ENSAPOG00000012901	rnaseh2c	99	90.441	Acanthochromis_polyacanthus
ENSSMAG00000017738	rnaseh2c	100	83.088	ENSACIG00000022433	rnaseh2c	100	83.088	Amphilophus_citrinellus
ENSSMAG00000017738	rnaseh2c	100	90.441	ENSAOCG00000016855	rnaseh2c	100	90.441	Amphiprion_ocellaris
ENSSMAG00000017738	rnaseh2c	100	91.176	ENSAPEG00000009850	rnaseh2c	100	91.176	Amphiprion_percula
ENSSMAG00000017738	rnaseh2c	100	88.971	ENSATEG00000014395	rnaseh2c	100	88.971	Anabas_testudineus
ENSSMAG00000017738	rnaseh2c	100	83.824	ENSACLG00000016950	rnaseh2c	100	83.824	Astatotilapia_calliptera
ENSSMAG00000017738	rnaseh2c	99	65.926	ENSAMXG00000001210	rnaseh2c	100	65.926	Astyanax_mexicanus
ENSSMAG00000017738	rnaseh2c	99	50.746	ENSCPBG00000023408	-	96	50.746	Chrysemys_picta_bellii
ENSSMAG00000017738	rnaseh2c	100	84.559	ENSCSEG00000005808	rnaseh2c	99	84.559	Cynoglossus_semilaevis
ENSSMAG00000017738	rnaseh2c	100	79.412	ENSCVAG00000006337	rnaseh2c	100	79.412	Cyprinodon_variegatus
ENSSMAG00000017738	rnaseh2c	100	67.647	ENSDARG00000089637	rnaseh2c	99	67.647	Danio_rerio
ENSSMAG00000017738	rnaseh2c	78	53.704	ENSEBUG00000014939	rnaseh2c	78	48.361	Eptatretus_burgeri
ENSSMAG00000017738	rnaseh2c	99	72.593	ENSELUG00000007345	rnaseh2c	99	72.593	Esox_lucius
ENSSMAG00000017738	rnaseh2c	96	79.231	ENSFHEG00000002419	rnaseh2c	98	78.358	Fundulus_heteroclitus
ENSSMAG00000017738	rnaseh2c	65	76.404	ENSGMOG00000008727	rnaseh2c	99	76.404	Gadus_morhua
ENSSMAG00000017738	rnaseh2c	100	78.676	ENSGAFG00000016755	rnaseh2c	83	78.676	Gambusia_affinis
ENSSMAG00000017738	rnaseh2c	99	50.746	ENSGAGG00000008193	-	96	50.746	Gopherus_agassizii
ENSSMAG00000017738	rnaseh2c	100	85.294	ENSHBUG00000012806	rnaseh2c	100	85.294	Haplochromis_burtoni
ENSSMAG00000017738	rnaseh2c	100	80.147	ENSHCOG00000007177	rnaseh2c	100	80.147	Hippocampus_comes
ENSSMAG00000017738	rnaseh2c	100	65.441	ENSIPUG00000018044	rnaseh2c	100	65.441	Ictalurus_punctatus
ENSSMAG00000017738	rnaseh2c	100	79.412	ENSKMAG00000004184	rnaseh2c	100	79.412	Kryptolebias_marmoratus
ENSSMAG00000017738	rnaseh2c	100	85.401	ENSLBEG00000005742	rnaseh2c	100	85.401	Labrus_bergylta
ENSSMAG00000017738	rnaseh2c	95	58.140	ENSLACG00000010120	-	93	57.576	Latimeria_chalumnae
ENSSMAG00000017738	rnaseh2c	100	86.029	ENSMAMG00000021610	rnaseh2c	100	86.029	Mastacembelus_armatus
ENSSMAG00000017738	rnaseh2c	100	84.559	ENSMZEG00005004796	rnaseh2c	100	84.559	Maylandia_zebra
ENSSMAG00000017738	rnaseh2c	100	83.088	ENSMMOG00000002869	rnaseh2c	100	83.088	Mola_mola
ENSSMAG00000017738	rnaseh2c	100	87.591	ENSMALG00000012198	rnaseh2c	100	87.591	Monopterus_albus
ENSSMAG00000017738	rnaseh2c	100	85.294	ENSNBRG00000001462	rnaseh2c	100	85.294	Neolamprologus_brichardi
ENSSMAG00000017738	rnaseh2c	100	84.559	ENSONIG00000005338	rnaseh2c	99	84.559	Oreochromis_niloticus
ENSSMAG00000017738	rnaseh2c	100	78.676	ENSORLG00000023473	rnaseh2c	100	78.676	Oryzias_latipes
ENSSMAG00000017738	rnaseh2c	100	79.412	ENSORLG00020019053	rnaseh2c	91	79.412	Oryzias_latipes_hni
ENSSMAG00000017738	rnaseh2c	100	79.412	ENSORLG00015017067	rnaseh2c	91	79.412	Oryzias_latipes_hsok
ENSSMAG00000017738	rnaseh2c	100	77.941	ENSOMEG00000018607	rnaseh2c	100	77.941	Oryzias_melastigma
ENSSMAG00000017738	rnaseh2c	100	58.824	ENSPKIG00000019331	rnaseh2c	100	58.824	Paramormyrops_kingsleyae
ENSSMAG00000017738	rnaseh2c	100	75.000	ENSPFOG00000009415	rnaseh2c	100	75.000	Poecilia_formosa
ENSSMAG00000017738	rnaseh2c	100	75.735	ENSPLAG00000023330	rnaseh2c	100	75.735	Poecilia_latipinna
ENSSMAG00000017738	rnaseh2c	100	75.735	ENSPMEG00000003696	rnaseh2c	100	75.735	Poecilia_mexicana
ENSSMAG00000017738	rnaseh2c	100	70.068	ENSPREG00000015384	rnaseh2c	73	70.068	Poecilia_reticulata
ENSSMAG00000017738	rnaseh2c	100	85.294	ENSPNYG00000014766	rnaseh2c	100	85.294	Pundamilia_nyererei
ENSSMAG00000017738	rnaseh2c	99	65.185	ENSPNAG00000019111	rnaseh2c	99	65.185	Pygocentrus_nattereri
ENSSMAG00000017738	rnaseh2c	99	65.926	ENSSFOG00015005760	rnaseh2c	98	67.176	Scleropages_formosus
ENSSMAG00000017738	rnaseh2c	100	90.441	ENSSDUG00000017285	rnaseh2c	100	90.441	Seriola_dumerili
ENSSMAG00000017738	rnaseh2c	100	91.912	ENSSLDG00000016030	rnaseh2c	100	91.912	Seriola_lalandi_dorsalis
ENSSMAG00000017738	rnaseh2c	94	50.382	ENSSPUG00000000842	-	87	50.000	Sphenodon_punctatus
ENSSMAG00000017738	rnaseh2c	100	84.559	ENSSPAG00000007536	rnaseh2c	100	84.559	Stegastes_partitus
ENSSMAG00000017738	rnaseh2c	100	77.206	ENSTRUG00000021845	rnaseh2c	100	77.206	Takifugu_rubripes
ENSSMAG00000017738	rnaseh2c	100	80.147	ENSTNIG00000000431	rnaseh2c	100	80.147	Tetraodon_nigroviridis
ENSSMAG00000017738	rnaseh2c	99	50.746	ENSXETG00000032466	-	98	50.746	Xenopus_tropicalis
ENSSMAG00000017738	rnaseh2c	100	77.206	ENSXCOG00000001611	rnaseh2c	100	77.206	Xiphophorus_couchianus
ENSSMAG00000017738	rnaseh2c	100	79.412	ENSXMAG00000003147	rnaseh2c	83	79.412	Xiphophorus_maculatus