EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000017901 (Gene tree)
Gene ID: -
Gene Symbol: scaf4a
Alias: fa96d07|si:dkey-50p8.3|wu:fa96d07
Full Name: SR-related CTD-associated factor 4a
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 11057 bases
Position: chr4:4628927-4639983
Accession: ZDB-GENE-030131-9003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000029212	RRM_1	PF00076.22	6.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000029572	-	6113	-	ENSSMAP00000029212	1164 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000017901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000017901's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000017901	scaf4a	55	58.608	ENSAPOG00000019615	scaf4b	79	56.569	Acanthochromis_polyacanthus
ENSSMAG00000017901	scaf4a	72	82.861	ENSAPOG00000002946	scaf4a	99	77.730	Acanthochromis_polyacanthus
ENSSMAG00000017901	scaf4a	72	83.077	ENSAOCG00000000615	scaf4a	99	78.504	Amphiprion_ocellaris
ENSSMAG00000017901	scaf4a	72	82.604	ENSAPEG00000021229	scaf4a	99	78.122	Amphiprion_percula
ENSSMAG00000017901	scaf4a	61	50.820	ENSATEG00000011758	scaf4b	77	46.986	Anabas_testudineus
ENSSMAG00000017901	scaf4a	99	49.543	ENSAMXG00000008585	scaf4a	97	50.882	Astyanax_mexicanus
ENSSMAG00000017901	scaf4a	53	53.451	ENSCJAG00000008993	SCAF4	95	54.545	Callithrix_jacchus
ENSSMAG00000017901	scaf4a	52	52.711	ENSCAFG00000008863	SCAF4	80	52.802	Canis_familiaris
ENSSMAG00000017901	scaf4a	52	57.781	ENSCAFG00020026019	SCAF4	72	60.069	Canis_lupus_dingo
ENSSMAG00000017901	scaf4a	53	53.061	ENSCHIG00000008385	SCAF4	80	52.142	Capra_hircus
ENSSMAG00000017901	scaf4a	58	43.994	ENSCPOG00000030311	-	56	41.520	Cavia_porcellus
ENSSMAG00000017901	scaf4a	53	53.461	ENSCATG00000030379	SCAF4	79	53.568	Cercocebus_atys
ENSSMAG00000017901	scaf4a	53	53.994	ENSCSAG00000009438	SCAF4	79	53.503	Chlorocebus_sabaeus
ENSSMAG00000017901	scaf4a	53	53.666	ENSCANG00000029847	SCAF4	80	53.454	Colobus_angolensis_palliatus
ENSSMAG00000017901	scaf4a	72	74.413	ENSCSEG00000019549	scaf4a	99	71.307	Cynoglossus_semilaevis
ENSSMAG00000017901	scaf4a	84	53.671	ENSDARG00000077093	scaf4a	98	48.690	Danio_rerio
ENSSMAG00000017901	scaf4a	53	53.235	ENSEASG00005007756	SCAF4	80	53.248	Equus_asinus_asinus
ENSSMAG00000017901	scaf4a	53	53.235	ENSECAG00000014248	SCAF4	80	53.248	Equus_caballus
ENSSMAG00000017901	scaf4a	50	82.812	ENSELUG00000009909	scaf4a	89	78.667	Esox_lucius
ENSSMAG00000017901	scaf4a	53	52.863	ENSFCAG00000002228	SCAF4	80	52.910	Felis_catus
ENSSMAG00000017901	scaf4a	65	72.251	ENSFHEG00000017866	scaf4a	89	74.211	Fundulus_heteroclitus
ENSSMAG00000017901	scaf4a	63	64.966	ENSGMOG00000015188	scaf4a	80	64.555	Gadus_morhua
ENSSMAG00000017901	scaf4a	56	54.381	ENSGALG00000033965	SCAF4	92	47.527	Gallus_gallus
ENSSMAG00000017901	scaf4a	63	76.178	ENSGAFG00000019460	scaf4a	87	72.396	Gambusia_affinis
ENSSMAG00000017901	scaf4a	66	80.050	ENSGACG00000020580	scaf4a	87	75.354	Gasterosteus_aculeatus
ENSSMAG00000017901	scaf4a	99	74.561	ENSHBUG00000007920	scaf4a	99	72.148	Haplochromis_burtoni
ENSSMAG00000017901	scaf4a	57	91.176	ENSHCOG00000006849	scaf4a	67	78.894	Hippocampus_comes
ENSSMAG00000017901	scaf4a	58	57.762	ENSKMAG00000005742	scaf4b	56	63.043	Kryptolebias_marmoratus
ENSSMAG00000017901	scaf4a	97	73.292	ENSLBEG00000014675	scaf4a	99	73.573	Labrus_bergylta
ENSSMAG00000017901	scaf4a	52	50.588	ENSLACG00000001394	SCAF8	57	51.181	Latimeria_chalumnae
ENSSMAG00000017901	scaf4a	57	42.340	ENSLOCG00000009162	scaf4a	85	55.388	Lepisosteus_oculatus
ENSSMAG00000017901	scaf4a	53	54.656	ENSLAFG00000010710	SCAF4	81	53.996	Loxodonta_africana
ENSSMAG00000017901	scaf4a	53	53.461	ENSMFAG00000037668	SCAF4	79	53.568	Macaca_fascicularis
ENSSMAG00000017901	scaf4a	53	53.461	ENSMMUG00000001712	SCAF4	79	53.568	Macaca_mulatta
ENSSMAG00000017901	scaf4a	53	53.461	ENSMNEG00000032966	SCAF4	79	53.568	Macaca_nemestrina
ENSSMAG00000017901	scaf4a	52	52.915	ENSMLEG00000039674	SCAF4	79	53.175	Mandrillus_leucophaeus
ENSSMAG00000017901	scaf4a	99	74.894	ENSMZEG00005024349	scaf4a	99	74.427	Maylandia_zebra
ENSSMAG00000017901	scaf4a	56	53.259	ENSMGAG00000014515	SCAF4	85	50.598	Meleagris_gallopavo
ENSSMAG00000017901	scaf4a	54	55.420	ENSMODG00000021040	SCAF4	81	54.923	Monodelphis_domestica
ENSSMAG00000017901	scaf4a	82	78.547	ENSMALG00000013825	scaf4a	96	78.893	Monopterus_albus
ENSSMAG00000017901	scaf4a	99	74.126	ENSONIG00000004687	scaf4a	99	72.143	Oreochromis_niloticus
ENSSMAG00000017901	scaf4a	99	66.391	ENSORLG00000004384	scaf4a	64	75.432	Oryzias_latipes
ENSSMAG00000017901	scaf4a	99	65.534	ENSORLG00020011857	scaf4a	64	74.502	Oryzias_latipes_hni
ENSSMAG00000017901	scaf4a	65	56.115	ENSORLG00020013853	scaf4b	78	53.650	Oryzias_latipes_hni
ENSSMAG00000017901	scaf4a	99	67.280	ENSORLG00015017880	scaf4a	65	75.564	Oryzias_latipes_hsok
ENSSMAG00000017901	scaf4a	99	67.628	ENSOMEG00000014482	scaf4a	64	75.564	Oryzias_melastigma
ENSSMAG00000017901	scaf4a	52	51.775	ENSOARG00000013894	SCAF4	79	51.417	Ovis_aries
ENSSMAG00000017901	scaf4a	52	52.466	ENSPPRG00000000635	SCAF4	80	52.626	Panthera_pardus
ENSSMAG00000017901	scaf4a	52	53.282	ENSPTIG00000021578	SCAF4	79	51.811	Panthera_tigris_altaica
ENSSMAG00000017901	scaf4a	53	53.461	ENSPANG00000017332	SCAF4	79	53.568	Papio_anubis
ENSSMAG00000017901	scaf4a	58	62.791	ENSPKIG00000022408	scaf4a	99	62.826	Paramormyrops_kingsleyae
ENSSMAG00000017901	scaf4a	58	38.174	ENSPSIG00000014242	SCAF4	90	47.541	Pelodiscus_sinensis
ENSSMAG00000017901	scaf4a	99	48.778	ENSPMGG00000016741	scaf4a	97	50.132	Periophthalmus_magnuspinnatus
ENSSMAG00000017901	scaf4a	52	54.348	ENSPCIG00000028183	SCAF4	74	53.991	Phascolarctos_cinereus
ENSSMAG00000017901	scaf4a	86	66.667	ENSPFOG00000017156	scaf4a	97	66.105	Poecilia_formosa
ENSSMAG00000017901	scaf4a	65	75.777	ENSPLAG00000001972	scaf4a	96	73.082	Poecilia_latipinna
ENSSMAG00000017901	scaf4a	56	56.777	ENSPLAG00000004403	-	51	70.629	Poecilia_latipinna
ENSSMAG00000017901	scaf4a	55	57.509	ENSPREG00000013510	scaf4b	51	72.028	Poecilia_reticulata
ENSSMAG00000017901	scaf4a	53	53.666	ENSPPYG00000011355	SCAF4	80	53.560	Pongo_abelii
ENSSMAG00000017901	scaf4a	53	53.926	ENSPVAG00000005220	SCAF4	80	52.537	Pteropus_vampyrus
ENSSMAG00000017901	scaf4a	68	57.314	ENSPNAG00000016892	scaf4a	97	52.137	Pygocentrus_nattereri
ENSSMAG00000017901	scaf4a	53	53.666	ENSRROG00000029488	SCAF4	80	53.454	Rhinopithecus_roxellana
ENSSMAG00000017901	scaf4a	53	53.811	ENSSHAG00000001581	SCAF4	83	54.075	Sarcophilus_harrisii
ENSSMAG00000017901	scaf4a	78	48.418	ENSSFOG00015006338	scaf4a	95	45.480	Scleropages_formosus
ENSSMAG00000017901	scaf4a	72	82.759	ENSSDUG00000012918	scaf4a	99	79.949	Seriola_dumerili
ENSSMAG00000017901	scaf4a	72	83.065	ENSSLDG00000021671	scaf4a	99	79.865	Seriola_lalandi_dorsalis
ENSSMAG00000017901	scaf4a	53	52.685	ENSSSCG00000021023	SCAF4	79	52.396	Sus_scrofa
ENSSMAG00000017901	scaf4a	67	64.260	ENSTRUG00000023543	scaf4a	58	74.207	Takifugu_rubripes
ENSSMAG00000017901	scaf4a	63	65.809	ENSTNIG00000009945	scaf4a	78	65.967	Tetraodon_nigroviridis
ENSSMAG00000017901	scaf4a	52	52.915	ENSTTRG00000010963	SCAF4	80	51.979	Tursiops_truncatus
ENSSMAG00000017901	scaf4a	52	52.648	ENSUMAG00000016962	SCAF4	82	49.946	Ursus_maritimus
ENSSMAG00000017901	scaf4a	52	52.727	ENSVVUG00000002953	SCAF4	80	52.654	Vulpes_vulpes
ENSSMAG00000017901	scaf4a	58	58.377	ENSXETG00000007351	scaf4	83	55.068	Xenopus_tropicalis