EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSMAG00000017905 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Plus strand
Length
18363 bases
Position
chr9:24969798-24988160
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000029245KH_1PF00013.293.5e-6914
ENSSMAP00000029245KH_1PF00013.293.5e-6924
ENSSMAP00000029245KH_1PF00013.293.5e-6934
ENSSMAP00000029245KH_1PF00013.293.5e-6944
ENSSMAP00000029216KH_1PF00013.294e-6914
ENSSMAP00000029216KH_1PF00013.294e-6924
ENSSMAP00000029216KH_1PF00013.294e-6934
ENSSMAP00000029216KH_1PF00013.294e-6944
ENSSMAP00000029245KH_2PF07650.173.9e-2111
ENSSMAP00000029216KH_2PF07650.174.8e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000029605-5155-ENSSMAP00000029245539 (aa)-A0A2U9BW87
ENSSMAT00000029576-6179-ENSSMAP00000029216556 (aa)--
Gene Model
Click here to download ENSSMAG00000017905's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000017905's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSMAG00000017905-7234.188ENSSMAG00000013541zgc:1100457334.188
ENSSMAG00000017905-7654.312ENSSMAG00000012166KHSRP9047.039
ENSSMAG00000017905-5636.842ENSSMAG00000011929pcbp36836.842
ENSSMAG00000017905-7950.620ENSSMAG00000004167khsrp9844.032
ENSSMAG00000017905-10065.876ENSSMAG00000003793FUBP39966.606
ENSSMAG00000017905-5739.683ENSSMAG00000003135-6439.683
ENSSMAG00000017905-9847.961ENSSMAG00000012029fubp19548.287
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000017905-9866.430ENSG00000107164FUBP39965.620Homo_sapiens
ENSSMAG00000017905-10097.959ENSAPOG00000018241-10097.959Acanthochromis_polyacanthus
ENSSMAG00000017905-10063.668ENSAPOG00000016135fubp39964.425Acanthochromis_polyacanthus
ENSSMAG00000017905-9867.496ENSAMEG00000016193FUBP39866.667Ailuropoda_melanoleuca
ENSSMAG00000017905-9988.454ENSACIG00000005212-8888.082Amphilophus_citrinellus
ENSSMAG00000017905-9959.710ENSACIG00000019595fubp39960.071Amphilophus_citrinellus
ENSSMAG00000017905-10097.403ENSAOCG00000008429-10097.403Amphiprion_ocellaris
ENSSMAG00000017905-10063.668ENSAOCG00000015110fubp39964.425Amphiprion_ocellaris
ENSSMAG00000017905-10063.668ENSAPEG00000015125fubp39964.425Amphiprion_percula
ENSSMAG00000017905-10097.403ENSAPEG00000022868-10097.403Amphiprion_percula
ENSSMAG00000017905-9994.610ENSATEG00000014618-9993.297Anabas_testudineus
ENSSMAG00000017905-10062.787ENSATEG00000018030fubp39963.717Anabas_testudineus
ENSSMAG00000017905-9469.925ENSAPLG00000011238FUBP39668.864Anas_platyrhynchos
ENSSMAG00000017905-9966.143ENSANAG00000022905FUBP39966.143Aotus_nancymaae
ENSSMAG00000017905-10095.018ENSACLG00000007655-10095.018Astatotilapia_calliptera
ENSSMAG00000017905-10062.478ENSACLG00000011819fubp39263.363Astatotilapia_calliptera
ENSSMAG00000017905-10071.404ENSAMXG00000008318fubp39971.231Astyanax_mexicanus
ENSSMAG00000017905-9867.140ENSBTAG00000013072FUBP39866.963Bos_taurus
ENSSMAG00000017905-9966.318ENSCJAG00000020542FUBP39966.143Callithrix_jacchus
ENSSMAG00000017905-9867.963ENSCAFG00000019942FUBP39967.091Canis_familiaris
ENSSMAG00000017905-9965.202ENSCAFG00020024002FUBP39667.510Canis_lupus_dingo
ENSSMAG00000017905-9866.726ENSCHIG00000027228FUBP39565.704Capra_hircus
ENSSMAG00000017905-8362.839ENSTSYG00000028199FUBP39961.460Carlito_syrichta
ENSSMAG00000017905-9169.540ENSCAPG00000007144FUBP39967.718Cavia_aperea
ENSSMAG00000017905-9867.668ENSCPOG00000010315FUBP310066.667Cavia_porcellus
ENSSMAG00000017905-9966.318ENSCCAG00000036313FUBP39966.143Cebus_capucinus
ENSSMAG00000017905-9962.718ENSCATG00000015864FUBP39962.544Cercocebus_atys
ENSSMAG00000017905-9965.125ENSCLAG00000009005FUBP39966.028Chinchilla_lanigera
ENSSMAG00000017905-9866.430ENSCSAG00000014748FUBP39965.620Chlorocebus_sabaeus
ENSSMAG00000017905-6676.119ENSCHOG00000010987FUBP36276.119Choloepus_hoffmanni
ENSSMAG00000017905-9770.566ENSCPBG00000022635FUBP39967.965Chrysemys_picta_bellii
ENSSMAG00000017905-9866.430ENSCANG00000042975FUBP39866.252Colobus_angolensis_palliatus
ENSSMAG00000017905-9866.607ENSCGRG00001011076Fubp39866.607Cricetulus_griseus_chok1gshd
ENSSMAG00000017905-9866.071ENSCGRG00000001872Fubp39965.439Cricetulus_griseus_crigri
ENSSMAG00000017905-10094.434ENSCSEG00000008761-10094.434Cynoglossus_semilaevis
ENSSMAG00000017905-10063.102ENSCSEG00000017815FUBP39963.993Cynoglossus_semilaevis
ENSSMAG00000017905-9963.009ENSCVAG00000017181FUBP39963.186Cyprinodon_variegatus
ENSSMAG00000017905-7992.971ENSCVAG00000006510-10093.598Cyprinodon_variegatus
ENSSMAG00000017905-9969.542ENSDARG00000086896fubp39271.992Danio_rerio
ENSSMAG00000017905-9862.857ENSDNOG00000014533FUBP39566.944Dasypus_novemcinctus
ENSSMAG00000017905-9853.740ENSETEG00000008842FUBP38653.740Echinops_telfairi
ENSSMAG00000017905-9968.613ENSEASG00005008416FUBP39968.431Equus_asinus_asinus
ENSSMAG00000017905-9968.978ENSECAG00000011500FUBP39967.016Equus_caballus
ENSSMAG00000017905-8764.200ENSEEUG00000000550FUBP38864.173Erinaceus_europaeus
ENSSMAG00000017905-10073.788ENSELUG00000013808fubp39973.788Esox_lucius
ENSSMAG00000017905-9979.482ENSELUG00000009949-9879.852Esox_lucius
ENSSMAG00000017905-9867.084ENSFCAG00000005113FUBP39965.969Felis_catus
ENSSMAG00000017905-8273.815ENSFALG00000001444FUBP39972.429Ficedula_albicollis
ENSSMAG00000017905-9366.226ENSFDAG00000013466FUBP39966.226Fukomys_damarensis
ENSSMAG00000017905-9965.568ENSFHEG00000003957fubp39965.751Fundulus_heteroclitus
ENSSMAG00000017905-7382.972ENSFHEG00000006558-8884.424Fundulus_heteroclitus
ENSSMAG00000017905-9761.905ENSGMOG00000017047-8663.762Gadus_morhua
ENSSMAG00000017905-8790.323ENSGMOG00000002653FUBP38690.323Gadus_morhua
ENSSMAG00000017905-9869.328ENSGALG00000003941FUBP39968.319Gallus_gallus
ENSSMAG00000017905-9965.385ENSGAFG00000010840FUBP39965.568Gambusia_affinis
ENSSMAG00000017905-9488.235ENSGAFG00000019255-10086.742Gambusia_affinis
ENSSMAG00000017905-9973.852ENSGACG00000000957-9973.592Gasterosteus_aculeatus
ENSSMAG00000017905-9963.869ENSGACG00000016704fubp39964.107Gasterosteus_aculeatus
ENSSMAG00000017905-9969.708ENSGAGG00000014090FUBP39969.708Gopherus_agassizii
ENSSMAG00000017905-9866.430ENSGGOG00000011318FUBP39866.252Gorilla_gorilla
ENSSMAG00000017905-10062.478ENSHBUG00000022849fubp39963.685Haplochromis_burtoni
ENSSMAG00000017905-9490.530ENSHBUG00000022475-9390.530Haplochromis_burtoni
ENSSMAG00000017905-9966.841ENSHGLG00000014381-9966.667Heterocephalus_glaber_female
ENSSMAG00000017905-9562.454ENSHGLG00000014728-9761.429Heterocephalus_glaber_female
ENSSMAG00000017905-9979.228ENSHCOG00000021170-10078.777Hippocampus_comes
ENSSMAG00000017905-9964.093ENSHCOG00000003639FUBP39764.324Hippocampus_comes
ENSSMAG00000017905-9968.707ENSIPUG00000019400FUBP39968.983Ictalurus_punctatus
ENSSMAG00000017905-9967.016ENSSTOG00000014105FUBP39966.841Ictidomys_tridecemlineatus
ENSSMAG00000017905-9367.724ENSJJAG00000009992Fubp39867.537Jaculus_jaculus
ENSSMAG00000017905-9992.222ENSKMAG00000021164-10092.222Kryptolebias_marmoratus
ENSSMAG00000017905-9358.891ENSKMAG00000016886fubp39859.252Kryptolebias_marmoratus
ENSSMAG00000017905-10097.610ENSLBEG00000007845-10097.610Labrus_bergylta
ENSSMAG00000017905-9958.989ENSLBEG00000017826FUBP39759.925Labrus_bergylta
ENSSMAG00000017905-9972.445ENSLACG00000017619FUBP39872.131Latimeria_chalumnae
ENSSMAG00000017905-9866.431ENSLOCG00000005411fubp39668.728Lepisosteus_oculatus
ENSSMAG00000017905-9966.143ENSLAFG00000011611FUBP39866.978Loxodonta_africana
ENSSMAG00000017905-9965.969ENSMFAG00000038309FUBP39965.794Macaca_fascicularis
ENSSMAG00000017905-9965.969ENSMMUG00000008249FUBP39965.794Macaca_mulatta
ENSSMAG00000017905-9965.969ENSMNEG00000039622FUBP39965.794Macaca_nemestrina
ENSSMAG00000017905-9366.604ENSMLEG00000037030FUBP39866.418Mandrillus_leucophaeus
ENSSMAG00000017905-10062.610ENSMAMG00000013259fubp39962.655Mastacembelus_armatus
ENSSMAG00000017905-9987.313ENSMAMG00000019009-10085.996Mastacembelus_armatus
ENSSMAG00000017905-10094.649ENSMZEG00005000329-10094.649Maylandia_zebra
ENSSMAG00000017905-9269.376ENSMGAG00000005342FUBP39968.324Meleagris_gallopavo
ENSSMAG00000017905-9866.845ENSMAUG00000012513Fubp39866.845Mesocricetus_auratus
ENSSMAG00000017905-9966.728ENSMICG00000034044-9966.179Microcebus_murinus
ENSSMAG00000017905-9866.904ENSMICG00000015452-9866.726Microcebus_murinus
ENSSMAG00000017905-9866.607ENSMOCG00000005635Fubp39866.250Microtus_ochrogaster
ENSSMAG00000017905-9960.600ENSMMOG00000000105FUBP39564.427Mola_mola
ENSSMAG00000017905-9989.179ENSMMOG00000020809-9789.219Mola_mola
ENSSMAG00000017905-9967.714ENSMODG00000012105FUBP39967.365Monodelphis_domestica
ENSSMAG00000017905-10094.991ENSMALG00000002993-10094.991Monopterus_albus
ENSSMAG00000017905-9963.346ENSMALG00000021819FUBP39862.795Monopterus_albus
ENSSMAG00000017905-9965.439MGP_CAROLIEiJ_G0023413Fubp39974.863Mus_caroli
ENSSMAG00000017905-9965.439ENSMUSG00000026843Fubp39974.863Mus_musculus
ENSSMAG00000017905-9965.088MGP_PahariEiJ_G0024870Fubp39973.770Mus_pahari
ENSSMAG00000017905-9965.439MGP_SPRETEiJ_G0024330Fubp39974.863Mus_spretus
ENSSMAG00000017905-9966.667ENSMPUG00000012692FUBP39966.492Mustela_putorius_furo
ENSSMAG00000017905-9865.357ENSMLUG00000008743FUBP39864.111Myotis_lucifugus
ENSSMAG00000017905-9867.263ENSNGAG00000016562Fubp39867.084Nannospalax_galili
ENSSMAG00000017905-9457.116ENSNBRG00000006751FUBP39458.065Neolamprologus_brichardi
ENSSMAG00000017905-9979.676ENSNBRG00000024313-9679.496Neolamprologus_brichardi
ENSSMAG00000017905-9467.041ENSNLEG00000012523FUBP39967.043Nomascus_leucogenys
ENSSMAG00000017905-9161.905ENSMEUG00000007862FUBP39060.573Notamacropus_eugenii
ENSSMAG00000017905-8768.713ENSOPRG00000008648FUBP38868.515Ochotona_princeps
ENSSMAG00000017905-9990.123ENSONIG00000000666-9890.123Oreochromis_niloticus
ENSSMAG00000017905-10062.301ENSONIG00000002861fubp39963.506Oreochromis_niloticus
ENSSMAG00000017905-9567.403ENSOANG00000001042FUBP39769.787Ornithorhynchus_anatinus
ENSSMAG00000017905-7971.429ENSOCUG00000006183FUBP38871.429Oryctolagus_cuniculus
ENSSMAG00000017905-9992.379ENSORLG00000017565-10092.379Oryzias_latipes
ENSSMAG00000017905-10062.257ENSORLG00000007103fubp39962.301Oryzias_latipes
ENSSMAG00000017905-9992.379ENSORLG00020013143-10092.379Oryzias_latipes_hni
ENSSMAG00000017905-10062.434ENSORLG00020019624fubp39962.478Oryzias_latipes_hni
ENSSMAG00000017905-9992.379ENSORLG00015003412-10092.379Oryzias_latipes_hsok
ENSSMAG00000017905-10062.434ENSORLG00015007684fubp39962.478Oryzias_latipes_hsok
ENSSMAG00000017905-10062.610ENSOMEG00000004190fubp39962.655Oryzias_melastigma
ENSSMAG00000017905-9993.309ENSOMEG00000007725-10093.309Oryzias_melastigma
ENSSMAG00000017905-9965.620ENSOGAG00000007555FUBP39965.620Otolemur_garnettii
ENSSMAG00000017905-9163.451ENSOARG00000007540FUBP39563.451Ovis_aries
ENSSMAG00000017905-9866.430ENSPPAG00000011103FUBP39965.620Pan_paniscus
ENSSMAG00000017905-9366.978ENSPPRG00000023251FUBP39866.978Panthera_pardus
ENSSMAG00000017905-8768.930ENSPTIG00000019979FUBP39868.944Panthera_tigris_altaica
ENSSMAG00000017905-8467.842ENSPTRG00000044650-9967.635Pan_troglodytes
ENSSMAG00000017905-9866.430ENSPTRG00000021474FUBP39965.620Pan_troglodytes
ENSSMAG00000017905-9866.430ENSPANG00000025968FUBP39965.620Papio_anubis
ENSSMAG00000017905-9870.430ENSPKIG00000007267-9271.910Paramormyrops_kingsleyae
ENSSMAG00000017905-9872.662ENSPKIG00000004367fubp39673.674Paramormyrops_kingsleyae
ENSSMAG00000017905-9471.875ENSPSIG00000006734FUBP39870.722Pelodiscus_sinensis
ENSSMAG00000017905-7980.731ENSPMGG00000016496-7780.328Periophthalmus_magnuspinnatus
ENSSMAG00000017905-9961.869ENSPMGG00000008874fubp39961.202Periophthalmus_magnuspinnatus
ENSSMAG00000017905-9866.429ENSPEMG00000019195Fubp39866.607Peromyscus_maniculatus_bairdii
ENSSMAG00000017905-9970.073ENSPCIG00000024114FUBP39970.438Phascolarctos_cinereus
ENSSMAG00000017905-9988.476ENSPFOG00000008400-10088.104Poecilia_formosa
ENSSMAG00000017905-9963.717ENSPFOG00000019842FUBP39963.894Poecilia_formosa
ENSSMAG00000017905-9361.804ENSPLAG00000016612fubp39760.821Poecilia_latipinna
ENSSMAG00000017905-9988.948ENSPLAG00000008443-10087.544Poecilia_latipinna
ENSSMAG00000017905-9965.146ENSPMEG00000016672FUBP39963.894Poecilia_mexicana
ENSSMAG00000017905-9391.235ENSPMEG00000014351-9988.762Poecilia_mexicana
ENSSMAG00000017905-10063.668ENSPREG00000015101FUBP39763.717Poecilia_reticulata
ENSSMAG00000017905-9988.662ENSPREG00000003168-10088.290Poecilia_reticulata
ENSSMAG00000017905-9866.430ENSPPYG00000019693FUBP39965.620Pongo_abelii
ENSSMAG00000017905-8668.140ENSPCAG00000001717FUBP38468.140Procavia_capensis
ENSSMAG00000017905-9966.318ENSPCOG00000022783FUBP39966.143Propithecus_coquereli
ENSSMAG00000017905-9867.140ENSPVAG00000001510FUBP39966.318Pteropus_vampyrus
ENSSMAG00000017905-10062.301ENSPNYG00000009567fubp39564.047Pundamilia_nyererei
ENSSMAG00000017905-9987.175ENSPNYG00000013607-9787.431Pundamilia_nyererei
ENSSMAG00000017905-10074.188ENSPNAG00000013478fubp39974.368Pygocentrus_nattereri
ENSSMAG00000017905-9865.893ENSRNOG00000009139Fubp39865.714Rattus_norvegicus
ENSSMAG00000017905-9864.121ENSRBIG00000030864-9963.525Rhinopithecus_bieti
ENSSMAG00000017905-9866.430ENSRBIG00000042110-9965.620Rhinopithecus_bieti
ENSSMAG00000017905-9866.430ENSRROG00000030006-9965.620Rhinopithecus_roxellana
ENSSMAG00000017905-9963.351ENSRROG00000032640-9963.351Rhinopithecus_roxellana
ENSSMAG00000017905-9845.406ENSSBOG00000021755FUBP39645.326Saimiri_boliviensis_boliviensis
ENSSMAG00000017905-8468.880ENSSHAG00000015689FUBP39969.087Sarcophilus_harrisii
ENSSMAG00000017905-9871.275ENSSFOG00015011098fubp39671.454Scleropages_formosus
ENSSMAG00000017905-9973.063ENSSFOG00015012455-9873.063Scleropages_formosus
ENSSMAG00000017905-10093.950ENSSDUG00000005975-10090.941Seriola_dumerili
ENSSMAG00000017905-9966.667ENSSDUG00000023495fubp39966.123Seriola_dumerili
ENSSMAG00000017905-10065.693ENSSLDG00000009455FUBP39966.667Seriola_lalandi_dorsalis
ENSSMAG00000017905-8493.049ENSSLDG00000013592-9291.145Seriola_lalandi_dorsalis
ENSSMAG00000017905-9871.348ENSSPUG00000013444FUBP39970.255Sphenodon_punctatus
ENSSMAG00000017905-10063.668ENSSPAG00000018848fubp39964.602Stegastes_partitus
ENSSMAG00000017905-10097.959ENSSPAG00000022405-10097.959Stegastes_partitus
ENSSMAG00000017905-9966.550ENSSSCG00000005702FUBP39969.087Sus_scrofa
ENSSMAG00000017905-9366.922ENSTGUG00000004662FUBP39865.201Taeniopygia_guttata
ENSSMAG00000017905-9992.551ENSTRUG00000013259-10092.520Takifugu_rubripes
ENSSMAG00000017905-9963.109ENSTRUG00000018658fubp39663.139Takifugu_rubripes
ENSSMAG00000017905-9887.947ENSTNIG00000005858-10087.947Tetraodon_nigroviridis
ENSSMAG00000017905-9554.637ENSTNIG00000009019fubp38659.470Tetraodon_nigroviridis
ENSSMAG00000017905-9853.131ENSTTRG00000015138FUBP39752.773Tursiops_truncatus
ENSSMAG00000017905-9867.318ENSUAMG00000009671FUBP39867.140Ursus_americanus
ENSSMAG00000017905-9363.246ENSUMAG00000018745FUBP39471.364Ursus_maritimus
ENSSMAG00000017905-9467.225ENSVVUG00000027641FUBP39767.608Vulpes_vulpes
ENSSMAG00000017905-9969.161ENSXETG00000001344fubp39969.161Xenopus_tropicalis
ENSSMAG00000017905-9975.605ENSXCOG00000011765-9776.252Xiphophorus_couchianus
ENSSMAG00000017905-9965.922ENSXCOG00000002806FUBP39964.855Xiphophorus_couchianus
ENSSMAG00000017905-10065.693ENSXMAG00000005541FUBP39965.751Xiphophorus_maculatus
ENSSMAG00000017905-9988.730ENSXMAG00000000237-9887.367Xiphophorus_maculatus

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