EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000018066 (Gene tree)
Gene ID: -
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 20819 bases
Position: chr4:4684614-4705432
Accession: ZDB-GENE-030131-9180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000029894	Exo_endo_phos	PF03372.23	1.4e-14	1	1
ENSSMAP00000029747	Exo_endo_phos	PF03372.23	7.8e-14	1	1
ENSSMAP00000029894	DUF1866	PF08952.11	2.2e-56	1	1
ENSSMAP00000029747	DUF1866	PF08952.11	2.6e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000030113	-	4620	-	ENSSMAP00000029747	1539 (aa)	-	-
ENSSMAT00000030264	-	4023	-	ENSSMAP00000029894	1340 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000018066's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000018066's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000018066	synj1	95	69.296	ENSG00000159082	SYNJ1	100	82.783	Homo_sapiens
ENSSMAG00000018066	synj1	98	84.924	ENSAPOG00000002809	synj1	100	83.926	Acanthochromis_polyacanthus
ENSSMAG00000018066	synj1	94	66.368	ENSAMEG00000015028	SYNJ1	81	65.290	Ailuropoda_melanoleuca
ENSSMAG00000018066	synj1	99	86.334	ENSACIG00000008857	synj1	99	85.988	Amphilophus_citrinellus
ENSSMAG00000018066	synj1	98	88.327	ENSAOCG00000009835	synj1	99	89.783	Amphiprion_ocellaris
ENSSMAG00000018066	synj1	98	87.955	ENSAPEG00000021010	synj1	100	81.955	Amphiprion_percula
ENSSMAG00000018066	synj1	98	89.230	ENSATEG00000002306	synj1	100	81.329	Anabas_testudineus
ENSSMAG00000018066	synj1	94	63.480	ENSAPLG00000011832	SYNJ1	83	64.192	Anas_platyrhynchos
ENSSMAG00000018066	synj1	94	67.620	ENSACAG00000003006	-	99	67.643	Anolis_carolinensis
ENSSMAG00000018066	synj1	98	65.864	ENSANAG00000027325	SYNJ1	99	67.147	Aotus_nancymaae
ENSSMAG00000018066	synj1	98	88.823	ENSACLG00000002255	synj1	99	86.937	Astatotilapia_calliptera
ENSSMAG00000018066	synj1	98	82.494	ENSAMXG00000008208	synj1	99	73.972	Astyanax_mexicanus
ENSSMAG00000018066	synj1	92	71.328	ENSBTAG00000003063	SYNJ1	99	67.011	Bos_taurus
ENSSMAG00000018066	synj1	95	69.124	ENSCJAG00000009187	SYNJ1	99	65.249	Callithrix_jacchus
ENSSMAG00000018066	synj1	98	67.704	ENSCAFG00000009041	SYNJ1	99	67.802	Canis_familiaris
ENSSMAG00000018066	synj1	99	68.468	ENSCAFG00020025776	SYNJ1	97	66.768	Canis_lupus_dingo
ENSSMAG00000018066	synj1	99	66.300	ENSCHIG00000005095	SYNJ1	96	61.468	Capra_hircus
ENSSMAG00000018066	synj1	95	68.918	ENSTSYG00000014541	SYNJ1	99	66.566	Carlito_syrichta
ENSSMAG00000018066	synj1	83	82.883	ENSCAPG00000014483	SYNJ1	79	82.883	Cavia_aperea
ENSSMAG00000018066	synj1	95	68.760	ENSCPOG00000012182	SYNJ1	99	65.520	Cavia_porcellus
ENSSMAG00000018066	synj1	95	67.896	ENSCCAG00000020825	SYNJ1	99	67.147	Cebus_capucinus
ENSSMAG00000018066	synj1	95	67.517	ENSCATG00000033891	SYNJ1	99	68.421	Cercocebus_atys
ENSSMAG00000018066	synj1	94	66.193	ENSCLAG00000009796	SYNJ1	100	82.158	Chinchilla_lanigera
ENSSMAG00000018066	synj1	95	65.926	ENSCSAG00000009654	SYNJ1	99	64.869	Chlorocebus_sabaeus
ENSSMAG00000018066	synj1	64	70.066	ENSCHOG00000012390	SYNJ1	54	71.747	Choloepus_hoffmanni
ENSSMAG00000018066	synj1	89	69.187	ENSCPBG00000006402	SYNJ1	87	75.686	Chrysemys_picta_bellii
ENSSMAG00000018066	synj1	95	69.219	ENSCANG00000031359	SYNJ1	99	66.518	Colobus_angolensis_palliatus
ENSSMAG00000018066	synj1	99	67.754	ENSCGRG00001010861	Synj1	99	66.052	Cricetulus_griseus_chok1gshd
ENSSMAG00000018066	synj1	95	65.746	ENSCGRG00000015749	Synj1	100	81.727	Cricetulus_griseus_crigri
ENSSMAG00000018066	synj1	95	88.108	ENSCSEG00000019614	synj1	99	88.768	Cynoglossus_semilaevis
ENSSMAG00000018066	synj1	98	87.111	ENSCVAG00000019250	synj1	99	87.389	Cyprinodon_variegatus
ENSSMAG00000018066	synj1	98	81.055	ENSDARG00000025011	synj1	99	81.487	Danio_rerio
ENSSMAG00000018066	synj1	94	64.318	ENSDNOG00000010732	SYNJ1	70	71.942	Dasypus_novemcinctus
ENSSMAG00000018066	synj1	54	78.052	ENSDORG00000014735	-	100	81.871	Dipodomys_ordii
ENSSMAG00000018066	synj1	82	77.778	ENSETEG00000018674	SYNJ1	73	77.778	Echinops_telfairi
ENSSMAG00000018066	synj1	99	67.638	ENSEASG00005006287	SYNJ1	96	78.095	Equus_asinus_asinus
ENSSMAG00000018066	synj1	97	69.110	ENSECAG00000004829	SYNJ1	99	68.482	Equus_caballus
ENSSMAG00000018066	synj1	87	70.074	ENSEEUG00000005150	SYNJ1	79	67.730	Erinaceus_europaeus
ENSSMAG00000018066	synj1	98	78.010	ENSELUG00000009731	synj1	99	72.552	Esox_lucius
ENSSMAG00000018066	synj1	97	65.563	ENSFCAG00000012498	SYNJ1	99	67.172	Felis_catus
ENSSMAG00000018066	synj1	77	51.625	ENSFALG00000004680	SYNJ1	61	68.938	Ficedula_albicollis
ENSSMAG00000018066	synj1	97	65.573	ENSFDAG00000016818	SYNJ1	100	82.446	Fukomys_damarensis
ENSSMAG00000018066	synj1	98	85.240	ENSFHEG00000017689	synj1	99	78.723	Fundulus_heteroclitus
ENSSMAG00000018066	synj1	80	84.399	ENSGMOG00000014852	synj1	80	86.778	Gadus_morhua
ENSSMAG00000018066	synj1	98	67.560	ENSGALG00000034317	SYNJ1	98	58.908	Gallus_gallus
ENSSMAG00000018066	synj1	97	85.272	ENSGAFG00000019466	synj1	100	78.738	Gambusia_affinis
ENSSMAG00000018066	synj1	99	82.840	ENSGACG00000020575	synj1	100	83.506	Gasterosteus_aculeatus
ENSSMAG00000018066	synj1	99	66.885	ENSGAGG00000022523	SYNJ1	99	66.370	Gopherus_agassizii
ENSSMAG00000018066	synj1	95	69.142	ENSGGOG00000015945	SYNJ1	99	68.576	Gorilla_gorilla
ENSSMAG00000018066	synj1	98	88.897	ENSHBUG00000007774	synj1	99	86.642	Haplochromis_burtoni
ENSSMAG00000018066	synj1	94	65.627	ENSHGLG00000006420	SYNJ1	100	82.158	Heterocephalus_glaber_female
ENSSMAG00000018066	synj1	94	67.727	ENSHGLG00100012591	SYNJ1	100	82.158	Heterocephalus_glaber_male
ENSSMAG00000018066	synj1	94	89.714	ENSHCOG00000012774	synj1	97	89.714	Hippocampus_comes
ENSSMAG00000018066	synj1	97	82.398	ENSIPUG00000010691	SYNJ1	99	75.688	Ictalurus_punctatus
ENSSMAG00000018066	synj1	95	66.050	ENSSTOG00000015806	SYNJ1	99	64.902	Ictidomys_tridecemlineatus
ENSSMAG00000018066	synj1	95	61.618	ENSJJAG00000020168	Synj1	82	61.319	Jaculus_jaculus
ENSSMAG00000018066	synj1	100	82.461	ENSKMAG00000004221	synj1	100	82.868	Kryptolebias_marmoratus
ENSSMAG00000018066	synj1	99	85.229	ENSLBEG00000015081	synj1	99	85.303	Labrus_bergylta
ENSSMAG00000018066	synj1	99	66.374	ENSLACG00000005928	SYNJ1	84	66.886	Latimeria_chalumnae
ENSSMAG00000018066	synj1	95	71.461	ENSLOCG00000009230	synj1	100	66.882	Lepisosteus_oculatus
ENSSMAG00000018066	synj1	94	65.195	ENSLAFG00000011806	SYNJ1	83	64.830	Loxodonta_africana
ENSSMAG00000018066	synj1	93	66.066	ENSMFAG00000018883	SYNJ1	99	64.045	Macaca_fascicularis
ENSSMAG00000018066	synj1	95	65.630	ENSMMUG00000004624	SYNJ1	84	75.068	Macaca_mulatta
ENSSMAG00000018066	synj1	95	67.896	ENSMNEG00000040077	SYNJ1	94	64.942	Macaca_nemestrina
ENSSMAG00000018066	synj1	95	67.488	ENSMLEG00000037029	SYNJ1	99	65.275	Mandrillus_leucophaeus
ENSSMAG00000018066	synj1	98	90.299	ENSMAMG00000013404	synj1	100	81.481	Mastacembelus_armatus
ENSSMAG00000018066	synj1	98	88.003	ENSMZEG00005024358	synj1	99	88.152	Maylandia_zebra
ENSSMAG00000018066	synj1	98	65.376	ENSMGAG00000014522	SYNJ1	99	57.979	Meleagris_gallopavo
ENSSMAG00000018066	synj1	95	65.723	ENSMAUG00000009743	Synj1	100	81.871	Mesocricetus_auratus
ENSSMAG00000018066	synj1	95	68.580	ENSMICG00000034953	SYNJ1	99	68.494	Microcebus_murinus
ENSSMAG00000018066	synj1	99	80.695	ENSMMOG00000010203	synj1	99	86.889	Mola_mola
ENSSMAG00000018066	synj1	95	61.152	ENSMODG00000021073	SYNJ1	99	61.274	Monodelphis_domestica
ENSSMAG00000018066	synj1	99	88.396	ENSMALG00000014015	synj1	100	79.688	Monopterus_albus
ENSSMAG00000018066	synj1	95	66.567	MGP_CAROLIEiJ_G0020951	Synj1	100	82.014	Mus_caroli
ENSSMAG00000018066	synj1	95	66.815	ENSMUSG00000022973	Synj1	100	82.014	Mus_musculus
ENSSMAG00000018066	synj1	95	66.418	MGP_PahariEiJ_G0016656	Synj1	100	82.014	Mus_pahari
ENSSMAG00000018066	synj1	95	66.890	MGP_SPRETEiJ_G0021857	Synj1	100	82.158	Mus_spretus
ENSSMAG00000018066	synj1	94	66.393	ENSMPUG00000001153	SYNJ1	83	64.672	Mustela_putorius_furo
ENSSMAG00000018066	synj1	53	76.912	ENSMLUG00000026584	-	100	80.357	Myotis_lucifugus
ENSSMAG00000018066	synj1	97	65.132	ENSNGAG00000000453	Synj1	100	81.871	Nannospalax_galili
ENSSMAG00000018066	synj1	98	83.723	ENSNBRG00000011936	synj1	100	80.331	Neolamprologus_brichardi
ENSSMAG00000018066	synj1	79	67.060	ENSNLEG00000003734	SYNJ1	98	63.680	Nomascus_leucogenys
ENSSMAG00000018066	synj1	69	69.627	ENSMEUG00000004158	-	61	69.627	Notamacropus_eugenii
ENSSMAG00000018066	synj1	88	76.727	ENSOPRG00000013602	SYNJ1	87	76.727	Ochotona_princeps
ENSSMAG00000018066	synj1	54	78.189	ENSODEG00000002409	-	100	82.014	Octodon_degus
ENSSMAG00000018066	synj1	98	81.904	ENSONIG00000004667	synj1	100	82.155	Oreochromis_niloticus
ENSSMAG00000018066	synj1	96	63.676	ENSOANG00000006929	SYNJ1	69	74.160	Ornithorhynchus_anatinus
ENSSMAG00000018066	synj1	95	65.486	ENSOCUG00000001420	SYNJ1	89	64.097	Oryctolagus_cuniculus
ENSSMAG00000018066	synj1	98	85.362	ENSORLG00000004320	synj1	99	84.576	Oryzias_latipes
ENSSMAG00000018066	synj1	100	81.291	ENSORLG00020011994	synj1	98	83.397	Oryzias_latipes_hni
ENSSMAG00000018066	synj1	98	84.914	ENSORLG00015018077	synj1	95	79.524	Oryzias_latipes_hsok
ENSSMAG00000018066	synj1	99	85.821	ENSOMEG00000014322	synj1	99	85.174	Oryzias_melastigma
ENSSMAG00000018066	synj1	95	63.360	ENSOGAG00000006010	SYNJ1	81	62.264	Otolemur_garnettii
ENSSMAG00000018066	synj1	94	66.244	ENSOARG00000013414	SYNJ1	68	74.797	Ovis_aries
ENSSMAG00000018066	synj1	95	69.142	ENSPPAG00000026784	SYNJ1	99	65.421	Pan_paniscus
ENSSMAG00000018066	synj1	97	65.563	ENSPPRG00000023469	SYNJ1	99	67.172	Panthera_pardus
ENSSMAG00000018066	synj1	97	65.636	ENSPTIG00000007930	SYNJ1	99	67.248	Panthera_tigris_altaica
ENSSMAG00000018066	synj1	95	69.219	ENSPTRG00000048135	-	99	68.576	Pan_troglodytes
ENSSMAG00000018066	synj1	95	69.219	ENSPTRG00000023787	SYNJ1	99	68.576	Pan_troglodytes
ENSSMAG00000018066	synj1	95	67.488	ENSPANG00000022531	SYNJ1	99	65.275	Papio_anubis
ENSSMAG00000018066	synj1	83	82.004	ENSPKIG00000022603	synj1	89	84.412	Paramormyrops_kingsleyae
ENSSMAG00000018066	synj1	99	83.885	ENSPMGG00000016831	synj1	95	82.945	Periophthalmus_magnuspinnatus
ENSSMAG00000018066	synj1	95	66.295	ENSPEMG00000018767	Synj1	100	82.302	Peromyscus_maniculatus_bairdii
ENSSMAG00000018066	synj1	78	57.129	ENSPMAG00000002887	synj1	80	58.086	Petromyzon_marinus
ENSSMAG00000018066	synj1	94	67.622	ENSPCIG00000016372	SYNJ1	99	63.093	Phascolarctos_cinereus
ENSSMAG00000018066	synj1	97	85.607	ENSPFOG00000016886	synj1	99	85.958	Poecilia_formosa
ENSSMAG00000018066	synj1	97	87.150	ENSPLAG00000017559	synj1	99	86.982	Poecilia_latipinna
ENSSMAG00000018066	synj1	97	86.999	ENSPMEG00000007643	synj1	100	78.554	Poecilia_mexicana
ENSSMAG00000018066	synj1	98	85.457	ENSPREG00000012412	synj1	99	85.460	Poecilia_reticulata
ENSSMAG00000018066	synj1	87	69.132	ENSPPYG00000011365	SYNJ1	79	74.706	Pongo_abelii
ENSSMAG00000018066	synj1	68	84.286	ENSPCAG00000009906	SYNJ1	58	84.286	Procavia_capensis
ENSSMAG00000018066	synj1	88	77.136	ENSPCOG00000024841	SYNJ1	94	71.795	Propithecus_coquereli
ENSSMAG00000018066	synj1	83	69.788	ENSPVAG00000000892	SYNJ1	82	63.068	Pteropus_vampyrus
ENSSMAG00000018066	synj1	98	86.622	ENSPNYG00000022989	synj1	100	86.606	Pundamilia_nyererei
ENSSMAG00000018066	synj1	83	86.667	ENSPNAG00000021119	synj1	91	88.022	Pygocentrus_nattereri
ENSSMAG00000018066	synj1	97	66.247	ENSRNOG00000002051	Synj1	99	68.202	Rattus_norvegicus
ENSSMAG00000018066	synj1	95	68.913	ENSRBIG00000034477	SYNJ1	99	65.201	Rhinopithecus_bieti
ENSSMAG00000018066	synj1	95	66.366	ENSRROG00000039256	SYNJ1	99	65.275	Rhinopithecus_roxellana
ENSSMAG00000018066	synj1	95	67.576	ENSSBOG00000021001	SYNJ1	99	67.071	Saimiri_boliviensis_boliviensis
ENSSMAG00000018066	synj1	94	64.955	ENSSHAG00000008538	SYNJ1	83	66.641	Sarcophilus_harrisii
ENSSMAG00000018066	synj1	98	80.832	ENSSFOG00015006095	synj1	100	73.691	Scleropages_formosus
ENSSMAG00000018066	synj1	98	89.013	ENSSDUG00000013058	synj1	100	82.445	Seriola_dumerili
ENSSMAG00000018066	synj1	98	89.978	ENSSLDG00000021406	synj1	99	90.045	Seriola_lalandi_dorsalis
ENSSMAG00000018066	synj1	94	68.291	ENSSPUG00000012552	SYNJ1	99	59.259	Sphenodon_punctatus
ENSSMAG00000018066	synj1	99	89.993	ENSSPAG00000017029	synj1	100	88.897	Stegastes_partitus
ENSSMAG00000018066	synj1	93	89.552	ENSSPAG00000006812	SYNJ1	100	82.152	Stegastes_partitus
ENSSMAG00000018066	synj1	95	66.742	ENSSSCG00000012035	SYNJ1	99	67.685	Sus_scrofa
ENSSMAG00000018066	synj1	93	65.935	ENSTGUG00000013445	SYNJ1	83	65.150	Taeniopygia_guttata
ENSSMAG00000018066	synj1	98	84.226	ENSTRUG00000006907	synj1	97	85.305	Takifugu_rubripes
ENSSMAG00000018066	synj1	98	77.289	ENSTNIG00000009940	synj1	98	75.683	Tetraodon_nigroviridis
ENSSMAG00000018066	synj1	73	77.193	ENSTBEG00000016298	SYNJ1	56	83.544	Tupaia_belangeri
ENSSMAG00000018066	synj1	93	74.436	ENSTTRG00000002222	SYNJ1	66	76.295	Tursiops_truncatus
ENSSMAG00000018066	synj1	94	70.817	ENSUAMG00000018606	SYNJ1	98	79.303	Ursus_americanus
ENSSMAG00000018066	synj1	90	75.248	ENSUMAG00000018419	SYNJ1	99	78.836	Ursus_maritimus
ENSSMAG00000018066	synj1	85	84.286	ENSVPAG00000001241	SYNJ1	77	84.286	Vicugna_pacos
ENSSMAG00000018066	synj1	95	66.967	ENSVVUG00000023125	SYNJ1	99	65.255	Vulpes_vulpes
ENSSMAG00000018066	synj1	99	59.480	ENSXETG00000009899	synj1	83	62.832	Xenopus_tropicalis
ENSSMAG00000018066	synj1	99	85.672	ENSXCOG00000011896	synj1	99	86.518	Xiphophorus_couchianus
ENSSMAG00000018066	synj1	97	86.057	ENSXMAG00000017524	synj1	99	87.296	Xiphophorus_maculatus