EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000018085 (Gene tree)
Gene ID: -
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: sharpin and rbck1 related
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 9801 bases
Position: chr21:4926115-4935915
Accession: ZDB-GENE-080220-52
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000029540	zf-RanBP	PF00641.18	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000029903	-	2148	-	ENSSMAP00000029540	715 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000018085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000018085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000018085	shrprbck1r	100	83.356	ENSAPOG00000022737	shrprbck1r	100	83.218	Acanthochromis_polyacanthus
ENSSMAG00000018085	shrprbck1r	60	57.143	ENSAPOG00000023352	sharpin	95	56.463	Acanthochromis_polyacanthus
ENSSMAG00000018085	shrprbck1r	100	80.168	ENSACIG00000002184	shrprbck1r	100	80.168	Amphilophus_citrinellus
ENSSMAG00000018085	shrprbck1r	60	57.859	ENSAOCG00000017464	sharpin	95	57.175	Amphiprion_ocellaris
ENSSMAG00000018085	shrprbck1r	100	82.940	ENSAOCG00000002890	shrprbck1r	100	82.940	Amphiprion_ocellaris
ENSSMAG00000018085	shrprbck1r	100	82.247	ENSAPEG00000023274	shrprbck1r	100	82.247	Amphiprion_percula
ENSSMAG00000018085	shrprbck1r	60	57.859	ENSAPEG00000004049	sharpin	95	57.175	Amphiprion_percula
ENSSMAG00000018085	shrprbck1r	60	58.770	ENSATEG00000007832	sharpin	88	58.087	Anabas_testudineus
ENSSMAG00000018085	shrprbck1r	100	83.148	ENSATEG00000014561	shrprbck1r	100	83.148	Anabas_testudineus
ENSSMAG00000018085	shrprbck1r	100	80.641	ENSACLG00000022609	shrprbck1r	100	80.641	Astatotilapia_calliptera
ENSSMAG00000018085	shrprbck1r	100	68.817	ENSAMXG00000021016	shrprbck1r	100	68.548	Astyanax_mexicanus
ENSSMAG00000018085	shrprbck1r	55	58.929	ENSAMXG00000006229	sharpin	97	58.673	Astyanax_mexicanus
ENSSMAG00000018085	shrprbck1r	100	79.190	ENSCSEG00000011306	shrprbck1r	100	79.190	Cynoglossus_semilaevis
ENSSMAG00000018085	shrprbck1r	100	77.191	ENSCVAG00000007250	shrprbck1r	100	77.051	Cyprinodon_variegatus
ENSSMAG00000018085	shrprbck1r	60	54.110	ENSCVAG00000006586	sharpin	95	53.653	Cyprinodon_variegatus
ENSSMAG00000018085	shrprbck1r	100	69.494	ENSDARG00000059871	shrprbck1r	100	69.357	Danio_rerio
ENSSMAG00000018085	shrprbck1r	55	56.250	ENSDARG00000076995	sharpin	94	56.000	Danio_rerio
ENSSMAG00000018085	shrprbck1r	100	71.879	ENSELUG00000016022	shrprbck1r	100	71.879	Esox_lucius
ENSSMAG00000018085	shrprbck1r	60	54.338	ENSFHEG00000013564	sharpin	94	53.881	Fundulus_heteroclitus
ENSSMAG00000018085	shrprbck1r	60	41.324	ENSGAFG00000021405	sharpin	95	40.868	Gambusia_affinis
ENSSMAG00000018085	shrprbck1r	100	76.536	ENSGAFG00000009309	shrprbck1r	100	76.397	Gambusia_affinis
ENSSMAG00000018085	shrprbck1r	75	81.682	ENSGACG00000002544	shrprbck1r	100	81.682	Gasterosteus_aculeatus
ENSSMAG00000018085	shrprbck1r	100	80.471	ENSHBUG00000021933	shrprbck1r	100	80.471	Haplochromis_burtoni
ENSSMAG00000018085	shrprbck1r	60	53.132	ENSHCOG00000018847	sharpin	80	53.132	Hippocampus_comes
ENSSMAG00000018085	shrprbck1r	54	56.962	ENSIPUG00000011951	sharpin	99	56.962	Ictalurus_punctatus
ENSSMAG00000018085	shrprbck1r	96	68.097	ENSIPUG00000014247	shrprbck1r	100	65.850	Ictalurus_punctatus
ENSSMAG00000018085	shrprbck1r	100	77.717	ENSKMAG00000015215	shrprbck1r	100	77.992	Kryptolebias_marmoratus
ENSSMAG00000018085	shrprbck1r	60	57.466	ENSKMAG00000015204	sharpin	76	56.982	Kryptolebias_marmoratus
ENSSMAG00000018085	shrprbck1r	60	57.692	ENSLBEG00000016624	sharpin	96	57.014	Labrus_bergylta
ENSSMAG00000018085	shrprbck1r	100	82.754	ENSLBEG00000016876	shrprbck1r	100	82.754	Labrus_bergylta
ENSSMAG00000018085	shrprbck1r	96	52.080	ENSLACG00000010948	-	99	51.690	Latimeria_chalumnae
ENSSMAG00000018085	shrprbck1r	100	67.538	ENSLOCG00000008910	shrprbck1r	100	67.400	Lepisosteus_oculatus
ENSSMAG00000018085	shrprbck1r	51	70.968	ENSMAMG00000014645	sharpin	93	70.968	Mastacembelus_armatus
ENSSMAG00000018085	shrprbck1r	100	80.000	ENSMAMG00000022930	shrprbck1r	100	80.000	Mastacembelus_armatus
ENSSMAG00000018085	shrprbck1r	100	80.194	ENSMZEG00005021257	shrprbck1r	100	80.194	Maylandia_zebra
ENSSMAG00000018085	shrprbck1r	100	77.410	ENSMMOG00000003764	shrprbck1r	100	77.410	Mola_mola
ENSSMAG00000018085	shrprbck1r	57	49.004	ENSMMOG00000016788	sharpin	91	49.402	Mola_mola
ENSSMAG00000018085	shrprbck1r	95	82.482	ENSMALG00000008861	shrprbck1r	95	82.482	Monopterus_albus
ENSSMAG00000018085	shrprbck1r	50	70.968	ENSMALG00000020528	sharpin	94	70.968	Monopterus_albus
ENSSMAG00000018085	shrprbck1r	100	80.946	ENSNBRG00000002270	shrprbck1r	100	80.946	Neolamprologus_brichardi
ENSSMAG00000018085	shrprbck1r	100	80.307	ENSONIG00000014401	shrprbck1r	100	80.307	Oreochromis_niloticus
ENSSMAG00000018085	shrprbck1r	55	55.206	ENSONIG00000009626	-	97	54.479	Oreochromis_niloticus
ENSSMAG00000018085	shrprbck1r	100	77.330	ENSORLG00000007392	shrprbck1r	100	77.191	Oryzias_latipes
ENSSMAG00000018085	shrprbck1r	60	57.110	ENSORLG00000017281	sharpin	95	56.193	Oryzias_latipes
ENSSMAG00000018085	shrprbck1r	60	57.110	ENSORLG00020000801	sharpin	95	56.193	Oryzias_latipes_hni
ENSSMAG00000018085	shrprbck1r	100	77.330	ENSORLG00020018619	shrprbck1r	100	77.191	Oryzias_latipes_hni
ENSSMAG00000018085	shrprbck1r	100	76.356	ENSORLG00015018865	shrprbck1r	100	76.217	Oryzias_latipes_hsok
ENSSMAG00000018085	shrprbck1r	60	57.110	ENSORLG00015009860	sharpin	95	56.193	Oryzias_latipes_hsok
ENSSMAG00000018085	shrprbck1r	100	77.747	ENSOMEG00000012749	shrprbck1r	100	77.747	Oryzias_melastigma
ENSSMAG00000018085	shrprbck1r	60	44.393	ENSOMEG00000005729	sharpin	86	76.923	Oryzias_melastigma
ENSSMAG00000018085	shrprbck1r	65	57.764	ENSPKIG00000018308	-	96	57.971	Paramormyrops_kingsleyae
ENSSMAG00000018085	shrprbck1r	100	69.146	ENSPKIG00000006933	shrprbck1r	100	69.188	Paramormyrops_kingsleyae
ENSSMAG00000018085	shrprbck1r	100	76.078	ENSPMGG00000013254	shrprbck1r	100	75.800	Periophthalmus_magnuspinnatus
ENSSMAG00000018085	shrprbck1r	100	77.809	ENSPFOG00000004214	shrprbck1r	100	77.531	Poecilia_formosa
ENSSMAG00000018085	shrprbck1r	60	54.110	ENSPFOG00000015253	sharpin	95	53.653	Poecilia_formosa
ENSSMAG00000018085	shrprbck1r	60	54.338	ENSPLAG00000000423	sharpin	95	53.881	Poecilia_latipinna
ENSSMAG00000018085	shrprbck1r	100	77.531	ENSPLAG00000020523	shrprbck1r	100	77.254	Poecilia_latipinna
ENSSMAG00000018085	shrprbck1r	100	77.577	ENSPMEG00000006877	shrprbck1r	100	77.298	Poecilia_mexicana
ENSSMAG00000018085	shrprbck1r	60	53.515	ENSPREG00000009702	sharpin	95	53.061	Poecilia_reticulata
ENSSMAG00000018085	shrprbck1r	100	76.414	ENSPREG00000014689	shrprbck1r	100	76.138	Poecilia_reticulata
ENSSMAG00000018085	shrprbck1r	100	80.609	ENSPNYG00000022601	shrprbck1r	100	80.609	Pundamilia_nyererei
ENSSMAG00000018085	shrprbck1r	100	68.428	ENSPNAG00000007847	shrprbck1r	100	68.293	Pygocentrus_nattereri
ENSSMAG00000018085	shrprbck1r	55	55.243	ENSPNAG00000002911	sharpin	99	55.357	Pygocentrus_nattereri
ENSSMAG00000018085	shrprbck1r	75	63.687	ENSSFOG00015014150	-	96	63.501	Scleropages_formosus
ENSSMAG00000018085	shrprbck1r	63	51.515	ENSSFOG00015004028	sharpin	99	51.889	Scleropages_formosus
ENSSMAG00000018085	shrprbck1r	100	85.455	ENSSDUG00000002959	shrprbck1r	100	85.455	Seriola_dumerili
ENSSMAG00000018085	shrprbck1r	60	45.618	ENSSDUG00000019039	sharpin	96	44.944	Seriola_dumerili
ENSSMAG00000018085	shrprbck1r	100	85.237	ENSSLDG00000009026	shrprbck1r	100	85.237	Seriola_lalandi_dorsalis
ENSSMAG00000018085	shrprbck1r	96	81.519	ENSSPAG00000016097	shrprbck1r	99	81.232	Stegastes_partitus
ENSSMAG00000018085	shrprbck1r	100	78.303	ENSTRUG00000006949	shrprbck1r	100	78.303	Takifugu_rubripes
ENSSMAG00000018085	shrprbck1r	60	52.414	ENSTRUG00000011046	sharpin	96	51.954	Takifugu_rubripes
ENSSMAG00000018085	shrprbck1r	55	56.265	ENSTNIG00000008521	sharpin	94	55.774	Tetraodon_nigroviridis
ENSSMAG00000018085	shrprbck1r	100	75.382	ENSXCOG00000006701	shrprbck1r	100	75.104	Xiphophorus_couchianus
ENSSMAG00000018085	shrprbck1r	50	75.000	ENSXCOG00000015019	sharpin	96	41.299	Xiphophorus_couchianus
ENSSMAG00000018085	shrprbck1r	100	75.522	ENSXMAG00000018972	shrprbck1r	100	75.243	Xiphophorus_maculatus
ENSSMAG00000018085	shrprbck1r	60	54.422	ENSXMAG00000022076	sharpin	95	53.725	Xiphophorus_maculatus