EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000018236 (Gene tree)
Gene ID: -
Gene Symbol: pum2
Alias: si:ch1073-351m12.1
Full Name: pumilio RNA-binding family member 2
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 19755 bases
Position: chr20:13846878-13866632
Accession: ZDB-GENE-081031-76
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000029818	PUF	PF00806.19	1.3e-69	1	7
ENSSMAP00000029818	PUF	PF00806.19	1.3e-69	2	7
ENSSMAP00000029818	PUF	PF00806.19	1.3e-69	3	7
ENSSMAP00000029818	PUF	PF00806.19	1.3e-69	4	7
ENSSMAP00000029818	PUF	PF00806.19	1.3e-69	5	7
ENSSMAP00000029818	PUF	PF00806.19	1.3e-69	6	7
ENSSMAP00000029818	PUF	PF00806.19	1.3e-69	7	7
ENSSMAP00000029796	PUF	PF00806.19	1.4e-67	1	7
ENSSMAP00000029796	PUF	PF00806.19	1.4e-67	2	7
ENSSMAP00000029796	PUF	PF00806.19	1.4e-67	3	7
ENSSMAP00000029796	PUF	PF00806.19	1.4e-67	4	7
ENSSMAP00000029796	PUF	PF00806.19	1.4e-67	5	7
ENSSMAP00000029796	PUF	PF00806.19	1.4e-67	6	7
ENSSMAP00000029796	PUF	PF00806.19	1.4e-67	7	7
ENSSMAP00000029850	PUF	PF00806.19	2.5e-39	1	4
ENSSMAP00000029850	PUF	PF00806.19	2.5e-39	2	4
ENSSMAP00000029850	PUF	PF00806.19	2.5e-39	3	4
ENSSMAP00000029850	PUF	PF00806.19	2.5e-39	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000030219	-	3015	-	ENSSMAP00000029850	1004 (aa)	-	-
ENSSMAT00000030162	-	6963	-	ENSSMAP00000029796	1213 (aa)	-	-
ENSSMAT00000030186	-	6891	-	ENSSMAP00000029818	1189 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000018236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000018236's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000018236	pum2	74	84.578	ENSSMAG00000010918	pum1	97	64.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000018236	pum2	100	67.279	ENSG00000055917	PUM2	100	76.471	Homo_sapiens
ENSSMAG00000018236	pum2	100	66.606	ENSAMEG00000002823	PUM2	100	73.105	Ailuropoda_melanoleuca
ENSSMAG00000018236	pum2	90	99.370	ENSACIG00000010646	pum2	96	99.168	Amphilophus_citrinellus
ENSSMAG00000018236	pum2	98	92.935	ENSAOCG00000016619	pum2	99	92.301	Amphiprion_ocellaris
ENSSMAG00000018236	pum2	100	94.737	ENSAPEG00000019924	pum2	100	94.161	Amphiprion_percula
ENSSMAG00000018236	pum2	100	93.909	ENSATEG00000015030	pum2	100	93.251	Anabas_testudineus
ENSSMAG00000018236	pum2	100	72.419	ENSAPLG00000010496	PUM2	100	70.627	Anas_platyrhynchos
ENSSMAG00000018236	pum2	100	66.300	ENSACAG00000010491	PUM2	100	71.927	Anolis_carolinensis
ENSSMAG00000018236	pum2	100	67.463	ENSANAG00000021807	PUM2	100	73.112	Aotus_nancymaae
ENSSMAG00000018236	pum2	100	93.919	ENSACLG00000022532	pum2	100	93.016	Astatotilapia_calliptera
ENSSMAG00000018236	pum2	100	68.667	ENSBTAG00000011155	PUM2	100	78.241	Bos_taurus
ENSSMAG00000018236	pum2	100	67.371	ENSCJAG00000007450	PUM2	100	73.020	Callithrix_jacchus
ENSSMAG00000018236	pum2	100	66.820	ENSCAFG00000003839	PUM2	100	72.946	Canis_familiaris
ENSSMAG00000018236	pum2	99	67.039	ENSCAFG00020025689	PUM2	100	72.022	Canis_lupus_dingo
ENSSMAG00000018236	pum2	100	66.545	ENSCHIG00000022180	PUM2	100	72.794	Capra_hircus
ENSSMAG00000018236	pum2	100	66.452	ENSTSYG00000014463	PUM2	100	73.500	Carlito_syrichta
ENSSMAG00000018236	pum2	89	88.153	ENSCAPG00000016888	PUM2	99	85.835	Cavia_aperea
ENSSMAG00000018236	pum2	100	67.739	ENSCPOG00000031996	PUM2	100	73.229	Cavia_porcellus
ENSSMAG00000018236	pum2	100	67.463	ENSCCAG00000037035	PUM2	100	73.112	Cebus_capucinus
ENSSMAG00000018236	pum2	100	67.555	ENSCATG00000043826	PUM2	100	73.204	Cercocebus_atys
ENSSMAG00000018236	pum2	100	67.371	ENSCLAG00000006048	PUM2	100	73.229	Chinchilla_lanigera
ENSSMAG00000018236	pum2	100	67.555	ENSCSAG00000008087	PUM2	100	73.204	Chlorocebus_sabaeus
ENSSMAG00000018236	pum2	78	73.276	ENSCHOG00000004575	PUM2	79	74.336	Choloepus_hoffmanni
ENSSMAG00000018236	pum2	90	90.754	ENSCPBG00000019966	PUM2	99	90.754	Chrysemys_picta_bellii
ENSSMAG00000018236	pum2	100	67.677	ENSCANG00000032797	PUM2	100	73.297	Colobus_angolensis_palliatus
ENSSMAG00000018236	pum2	100	67.463	ENSCGRG00001025023	Pum2	100	73.020	Cricetulus_griseus_chok1gshd
ENSSMAG00000018236	pum2	100	67.463	ENSCGRG00000001580	Pum2	100	73.204	Cricetulus_griseus_crigri
ENSSMAG00000018236	pum2	100	93.004	ENSCSEG00000020899	pum2	100	92.593	Cynoglossus_semilaevis
ENSSMAG00000018236	pum2	100	92.769	ENSCVAG00000002426	pum2	100	92.440	Cyprinodon_variegatus
ENSSMAG00000018236	pum2	100	86.253	ENSDARG00000061040	pum2	100	85.163	Danio_rerio
ENSSMAG00000018236	pum2	100	66.636	ENSDNOG00000006733	PUM2	99	70.119	Dasypus_novemcinctus
ENSSMAG00000018236	pum2	100	63.177	ENSDORG00000011453	Pum2	100	68.848	Dipodomys_ordii
ENSSMAG00000018236	pum2	78	91.103	ENSETEG00000017683	PUM2	78	91.103	Echinops_telfairi
ENSSMAG00000018236	pum2	63	60.517	ENSEBUG00000014828	pum2	92	58.292	Eptatretus_burgeri
ENSSMAG00000018236	pum2	95	51.591	ENSEBUG00000004435	pum2	96	58.738	Eptatretus_burgeri
ENSSMAG00000018236	pum2	100	66.820	ENSEASG00005009429	PUM2	100	73.130	Equus_asinus_asinus
ENSSMAG00000018236	pum2	100	68.966	ENSECAG00000021930	PUM2	100	77.932	Equus_caballus
ENSSMAG00000018236	pum2	67	95.556	ENSEEUG00000003224	-	62	95.556	Erinaceus_europaeus
ENSSMAG00000018236	pum2	100	88.971	ENSELUG00000014997	pum2	100	88.408	Esox_lucius
ENSSMAG00000018236	pum2	100	68.942	ENSFCAG00000027520	PUM2	100	72.853	Felis_catus
ENSSMAG00000018236	pum2	100	66.331	ENSFALG00000001759	PUM2	100	72.777	Ficedula_albicollis
ENSSMAG00000018236	pum2	88	82.510	ENSFDAG00000019685	PUM2	98	90.998	Fukomys_damarensis
ENSSMAG00000018236	pum2	100	92.565	ENSFHEG00000021596	pum2	100	91.099	Fundulus_heteroclitus
ENSSMAG00000018236	pum2	90	86.704	ENSGMOG00000006903	pum2	100	86.611	Gadus_morhua
ENSSMAG00000018236	pum2	79	90.998	ENSGALG00000016481	PUM2	92	90.998	Gallus_gallus
ENSSMAG00000018236	pum2	100	93.663	ENSGAFG00000013691	pum2	100	93.086	Gambusia_affinis
ENSSMAG00000018236	pum2	90	91.814	ENSGACG00000009670	pum2	100	91.643	Gasterosteus_aculeatus
ENSSMAG00000018236	pum2	100	72.989	ENSGAGG00000020698	PUM2	100	72.652	Gopherus_agassizii
ENSSMAG00000018236	pum2	100	67.463	ENSGGOG00000011374	PUM2	100	73.112	Gorilla_gorilla
ENSSMAG00000018236	pum2	100	94.937	ENSHBUG00000016453	pum2	100	85.487	Haplochromis_burtoni
ENSSMAG00000018236	pum2	100	66.360	ENSHGLG00000007892	PUM2	100	72.350	Heterocephalus_glaber_female
ENSSMAG00000018236	pum2	100	66.086	ENSHGLG00100015510	PUM2	100	73.112	Heterocephalus_glaber_male
ENSSMAG00000018236	pum2	100	91.450	ENSHCOG00000010119	pum2	100	91.534	Hippocampus_comes
ENSSMAG00000018236	pum2	100	67.065	ENSSTOG00000006262	PUM2	100	73.389	Ictidomys_tridecemlineatus
ENSSMAG00000018236	pum2	100	67.094	ENSJJAG00000020969	Pum2	100	73.781	Jaculus_jaculus
ENSSMAG00000018236	pum2	100	92.763	ENSKMAG00000017216	pum2	100	92.270	Kryptolebias_marmoratus
ENSSMAG00000018236	pum2	100	95.062	ENSLBEG00000020488	pum2	100	94.733	Labrus_bergylta
ENSSMAG00000018236	pum2	100	74.223	ENSLACG00000008723	PUM2	100	72.712	Latimeria_chalumnae
ENSSMAG00000018236	pum2	100	76.437	ENSLOCG00000017196	pum2	100	74.378	Lepisosteus_oculatus
ENSSMAG00000018236	pum2	100	66.728	ENSLAFG00000009278	PUM2	100	72.518	Loxodonta_africana
ENSSMAG00000018236	pum2	100	67.555	ENSMFAG00000000492	PUM2	100	73.204	Macaca_fascicularis
ENSSMAG00000018236	pum2	100	67.555	ENSMMUG00000023181	PUM2	100	73.204	Macaca_mulatta
ENSSMAG00000018236	pum2	100	67.555	ENSMNEG00000039659	PUM2	100	73.204	Macaca_nemestrina
ENSSMAG00000018236	pum2	100	67.555	ENSMLEG00000039243	PUM2	100	73.204	Mandrillus_leucophaeus
ENSSMAG00000018236	pum2	100	93.745	ENSMAMG00000006121	pum2	100	93.416	Mastacembelus_armatus
ENSSMAG00000018236	pum2	100	93.919	ENSMZEG00005000791	pum2	100	93.016	Maylandia_zebra
ENSSMAG00000018236	pum2	100	66.026	ENSMGAG00000014040	PUM2	100	72.477	Meleagris_gallopavo
ENSSMAG00000018236	pum2	100	67.431	ENSMAUG00000000311	Pum2	100	73.297	Mesocricetus_auratus
ENSSMAG00000018236	pum2	100	67.463	ENSMICG00000011647	PUM2	100	73.112	Microcebus_murinus
ENSSMAG00000018236	pum2	100	67.156	ENSMOCG00000013663	Pum2	100	73.432	Microtus_ochrogaster
ENSSMAG00000018236	pum2	100	81.499	ENSMMOG00000002975	pum2	100	90.918	Mola_mola
ENSSMAG00000018236	pum2	100	64.194	ENSMODG00000009811	PUM2	100	70.837	Monodelphis_domestica
ENSSMAG00000018236	pum2	100	67.126	MGP_CAROLIEiJ_G0017603	Pum2	99	76.426	Mus_caroli
ENSSMAG00000018236	pum2	100	67.004	ENSMUSG00000020594	Pum2	98	76.046	Mus_musculus
ENSSMAG00000018236	pum2	100	67.493	MGP_PahariEiJ_G0029361	Pum2	99	76.426	Mus_pahari
ENSSMAG00000018236	pum2	100	67.096	MGP_SPRETEiJ_G0018447	Pum2	99	76.046	Mus_spretus
ENSSMAG00000018236	pum2	100	67.004	ENSMPUG00000013734	PUM2	100	73.130	Mustela_putorius_furo
ENSSMAG00000018236	pum2	100	66.332	ENSMLUG00000007362	PUM2	100	72.594	Myotis_lucifugus
ENSSMAG00000018236	pum2	99	51.038	ENSNGAG00000016239	-	95	57.292	Nannospalax_galili
ENSSMAG00000018236	pum2	100	66.880	ENSNGAG00000016665	-	100	73.278	Nannospalax_galili
ENSSMAG00000018236	pum2	100	67.463	ENSNLEG00000002509	PUM2	100	73.112	Nomascus_leucogenys
ENSSMAG00000018236	pum2	93	71.038	ENSMEUG00000016567	PUM2	100	63.163	Notamacropus_eugenii
ENSSMAG00000018236	pum2	73	75.342	ENSOPRG00000001963	PUM2	92	59.016	Ochotona_princeps
ENSSMAG00000018236	pum2	100	66.881	ENSODEG00000007823	PUM2	100	73.247	Octodon_degus
ENSSMAG00000018236	pum2	100	93.881	ENSONIG00000006119	pum2	100	93.965	Oreochromis_niloticus
ENSSMAG00000018236	pum2	100	66.667	ENSOCUG00000017908	PUM2	100	72.187	Oryctolagus_cuniculus
ENSSMAG00000018236	pum2	100	90.198	ENSORLG00000012611	pum2	100	89.786	Oryzias_latipes
ENSSMAG00000018236	pum2	100	90.198	ENSORLG00020014452	pum2	100	89.786	Oryzias_latipes_hni
ENSSMAG00000018236	pum2	100	90.198	ENSORLG00015009427	pum2	100	89.786	Oryzias_latipes_hsok
ENSSMAG00000018236	pum2	100	66.423	ENSOARG00000017236	PUM2	100	72.661	Ovis_aries
ENSSMAG00000018236	pum2	100	67.463	ENSPPAG00000023095	PUM2	100	73.112	Pan_paniscus
ENSSMAG00000018236	pum2	100	66.728	ENSPPRG00000021443	PUM2	100	72.853	Panthera_pardus
ENSSMAG00000018236	pum2	100	66.728	ENSPTIG00000018982	PUM2	100	72.853	Panthera_tigris_altaica
ENSSMAG00000018236	pum2	100	67.463	ENSPTRG00000011692	PUM2	100	73.112	Pan_troglodytes
ENSSMAG00000018236	pum2	100	57.463	ENSPANG00000009393	PUM2	100	87.324	Papio_anubis
ENSSMAG00000018236	pum2	100	72.951	ENSPSIG00000011626	PUM2	99	70.694	Pelodiscus_sinensis
ENSSMAG00000018236	pum2	100	67.064	ENSPEMG00000008357	Pum2	100	73.088	Peromyscus_maniculatus_bairdii
ENSSMAG00000018236	pum2	100	54.736	ENSPMAG00000007038	pum2	100	60.620	Petromyzon_marinus
ENSSMAG00000018236	pum2	100	63.645	ENSPCIG00000022139	PUM2	100	70.064	Phascolarctos_cinereus
ENSSMAG00000018236	pum2	100	93.663	ENSPFOG00000019208	pum2	100	93.086	Poecilia_formosa
ENSSMAG00000018236	pum2	100	93.663	ENSPLAG00000001826	pum2	100	93.086	Poecilia_latipinna
ENSSMAG00000018236	pum2	100	93.663	ENSPMEG00000015766	pum2	100	93.086	Poecilia_mexicana
ENSSMAG00000018236	pum2	100	67.647	ENSPPYG00000012617	PUM2	100	73.297	Pongo_abelii
ENSSMAG00000018236	pum2	70	88.636	ENSPCAG00000008001	PUM2	69	89.130	Procavia_capensis
ENSSMAG00000018236	pum2	99	67.100	ENSPCOG00000019636	PUM2	100	73.134	Propithecus_coquereli
ENSSMAG00000018236	pum2	92	82.278	ENSPVAG00000002920	PUM2	89	82.278	Pteropus_vampyrus
ENSSMAG00000018236	pum2	100	93.837	ENSPNYG00000022901	pum2	100	92.933	Pundamilia_nyererei
ENSSMAG00000018236	pum2	98	88.936	ENSPNAG00000008025	pum2	99	88.085	Pygocentrus_nattereri
ENSSMAG00000018236	pum2	100	66.024	ENSRNOG00000006180	Pum2	100	72.702	Rattus_norvegicus
ENSSMAG00000018236	pum2	100	67.677	ENSRBIG00000044880	PUM2	100	73.301	Rhinopithecus_bieti
ENSSMAG00000018236	pum2	100	67.555	ENSSBOG00000022007	PUM2	100	73.204	Saimiri_boliviensis_boliviensis
ENSSMAG00000018236	pum2	100	64.065	ENSSHAG00000002778	PUM2	100	69.427	Sarcophilus_harrisii
ENSSMAG00000018236	pum2	91	77.697	ENSSFOG00015003476	pum2	99	76.574	Scleropages_formosus
ENSSMAG00000018236	pum2	97	92.857	ENSSDUG00000001800	pum2	99	94.538	Seriola_dumerili
ENSSMAG00000018236	pum2	100	95.720	ENSSLDG00000000981	pum2	100	95.720	Seriola_lalandi_dorsalis
ENSSMAG00000018236	pum2	86	66.444	ENSSARG00000010992	PUM2	86	65.213	Sorex_araneus
ENSSMAG00000018236	pum2	99	66.388	ENSSPUG00000017012	PUM2	99	72.222	Sphenodon_punctatus
ENSSMAG00000018236	pum2	100	94.572	ENSSPAG00000022948	pum2	100	93.997	Stegastes_partitus
ENSSMAG00000018236	pum2	100	66.452	ENSSSCG00000008600	PUM2	100	77.932	Sus_scrofa
ENSSMAG00000018236	pum2	100	66.240	ENSTGUG00000013149	PUM2	100	72.686	Taeniopygia_guttata
ENSSMAG00000018236	pum2	100	88.497	ENSTRUG00000018167	pum2	100	87.312	Takifugu_rubripes
ENSSMAG00000018236	pum2	100	90.643	ENSTNIG00000003116	pum2	100	89.808	Tetraodon_nigroviridis
ENSSMAG00000018236	pum2	70	89.506	ENSTBEG00000008729	PUM2	79	86.214	Tupaia_belangeri
ENSSMAG00000018236	pum2	100	66.330	ENSTTRG00000004887	PUM2	100	72.853	Tursiops_truncatus
ENSSMAG00000018236	pum2	64	80.745	ENSUAMG00000008120	PUM2	97	76.615	Ursus_americanus
ENSSMAG00000018236	pum2	100	67.004	ENSUMAG00000023198	PUM2	100	73.130	Ursus_maritimus
ENSSMAG00000018236	pum2	100	66.330	ENSVPAG00000005056	PUM2	100	72.921	Vicugna_pacos
ENSSMAG00000018236	pum2	100	66.912	ENSVVUG00000014829	PUM2	100	73.038	Vulpes_vulpes
ENSSMAG00000018236	pum2	100	69.085	ENSXETG00000008903	pum2	100	66.914	Xenopus_tropicalis
ENSSMAG00000018236	pum2	97	89.300	ENSXCOG00000002556	pum2	99	93.789	Xiphophorus_couchianus
ENSSMAG00000018236	pum2	100	93.580	ENSXMAG00000017682	pum2	100	93.004	Xiphophorus_maculatus