EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000018256 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 63226 bases
Position: chr15:1598340-1661565
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000029770	S1	PF00575.23	2.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000030136	-	6904	-	ENSSMAP00000029770	1022 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000018256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000018256's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000018256	si:ch211-117n7.8	83	56.927	ENSG00000068784	SRBD1	98	51.378	Homo_sapiens
ENSSMAG00000018256	si:ch211-117n7.8	100	80.976	ENSAPOG00000005103	si:ch211-117n7.8	100	80.976	Acanthochromis_polyacanthus
ENSSMAG00000018256	si:ch211-117n7.8	82	57.882	ENSAMEG00000005993	SRBD1	99	50.628	Ailuropoda_melanoleuca
ENSSMAG00000018256	si:ch211-117n7.8	97	81.087	ENSACIG00000009875	si:ch211-117n7.8	100	81.087	Amphilophus_citrinellus
ENSSMAG00000018256	si:ch211-117n7.8	100	80.078	ENSAOCG00000024718	si:ch211-117n7.8	100	80.078	Amphiprion_ocellaris
ENSSMAG00000018256	si:ch211-117n7.8	98	79.559	ENSAPEG00000002645	si:ch211-117n7.8	100	79.559	Amphiprion_percula
ENSSMAG00000018256	si:ch211-117n7.8	100	80.293	ENSATEG00000010844	si:ch211-117n7.8	100	80.293	Anabas_testudineus
ENSSMAG00000018256	si:ch211-117n7.8	84	57.307	ENSAPLG00000006313	SRBD1	99	51.684	Anas_platyrhynchos
ENSSMAG00000018256	si:ch211-117n7.8	94	52.352	ENSANAG00000025573	SRBD1	99	50.580	Aotus_nancymaae
ENSSMAG00000018256	si:ch211-117n7.8	100	80.957	ENSACLG00000024219	si:ch211-117n7.8	100	80.957	Astatotilapia_calliptera
ENSSMAG00000018256	si:ch211-117n7.8	99	61.759	ENSAMXG00000004294	SRBD1	99	63.434	Astyanax_mexicanus
ENSSMAG00000018256	si:ch211-117n7.8	82	57.479	ENSBTAG00000007508	SRBD1	81	57.126	Bos_taurus
ENSSMAG00000018256	si:ch211-117n7.8	94	52.464	ENSCJAG00000000727	SRBD1	99	50.387	Callithrix_jacchus
ENSSMAG00000018256	si:ch211-117n7.8	82	57.796	ENSCAFG00000002554	SRBD1	99	51.060	Canis_familiaris
ENSSMAG00000018256	si:ch211-117n7.8	82	58.612	ENSCAFG00020026284	SRBD1	97	58.493	Canis_lupus_dingo
ENSSMAG00000018256	si:ch211-117n7.8	82	57.715	ENSCHIG00000016535	SRBD1	82	57.362	Capra_hircus
ENSSMAG00000018256	si:ch211-117n7.8	82	57.728	ENSTSYG00000012797	SRBD1	84	57.611	Carlito_syrichta
ENSSMAG00000018256	si:ch211-117n7.8	82	58.115	ENSCPOG00000004773	SRBD1	84	57.945	Cavia_porcellus
ENSSMAG00000018256	si:ch211-117n7.8	83	57.159	ENSCCAG00000025589	SRBD1	98	51.530	Cebus_capucinus
ENSSMAG00000018256	si:ch211-117n7.8	82	57.529	ENSCATG00000039530	SRBD1	98	51.476	Cercocebus_atys
ENSSMAG00000018256	si:ch211-117n7.8	82	58.880	ENSCLAG00000008623	SRBD1	84	58.760	Chinchilla_lanigera
ENSSMAG00000018256	si:ch211-117n7.8	83	57.159	ENSCSAG00000013350	SRBD1	84	57.043	Chlorocebus_sabaeus
ENSSMAG00000018256	si:ch211-117n7.8	74	79.070	ENSCHOG00000003805	SRBD1	74	79.070	Choloepus_hoffmanni
ENSSMAG00000018256	si:ch211-117n7.8	82	57.851	ENSCPBG00000005677	SRBD1	98	52.559	Chrysemys_picta_bellii
ENSSMAG00000018256	si:ch211-117n7.8	77	40.926	ENSCING00000005950	-	99	40.801	Ciona_intestinalis
ENSSMAG00000018256	si:ch211-117n7.8	77	42.045	ENSCSAVG00000000861	-	99	42.045	Ciona_savignyi
ENSSMAG00000018256	si:ch211-117n7.8	83	57.043	ENSCANG00000016307	SRBD1	98	51.575	Colobus_angolensis_palliatus
ENSSMAG00000018256	si:ch211-117n7.8	82	57.363	ENSCGRG00001000513	Srbd1	84	57.007	Cricetulus_griseus_chok1gshd
ENSSMAG00000018256	si:ch211-117n7.8	82	57.363	ENSCGRG00000002283	Srbd1	84	57.007	Cricetulus_griseus_crigri
ENSSMAG00000018256	si:ch211-117n7.8	100	72.754	ENSCSEG00000000856	si:ch211-117n7.8	100	72.949	Cynoglossus_semilaevis
ENSSMAG00000018256	si:ch211-117n7.8	85	82.081	ENSCVAG00000020212	si:ch211-117n7.8	99	74.226	Cyprinodon_variegatus
ENSSMAG00000018256	si:ch211-117n7.8	82	56.858	ENSDNOG00000018686	SRBD1	83	56.858	Dasypus_novemcinctus
ENSSMAG00000018256	si:ch211-117n7.8	98	51.280	ENSDORG00000010468	Srbd1	98	51.181	Dipodomys_ordii
ENSSMAG00000018256	si:ch211-117n7.8	77	34.925	FBgn0051156	CG31156	79	35.346	Drosophila_melanogaster
ENSSMAG00000018256	si:ch211-117n7.8	88	57.195	ENSETEG00000000739	SRBD1	92	57.013	Echinops_telfairi
ENSSMAG00000018256	si:ch211-117n7.8	71	47.802	ENSEBUG00000008902	si:ch211-117n7.8	95	47.521	Eptatretus_burgeri
ENSSMAG00000018256	si:ch211-117n7.8	82	55.399	ENSEASG00005003132	SRBD1	98	56.767	Equus_asinus_asinus
ENSSMAG00000018256	si:ch211-117n7.8	82	57.697	ENSECAG00000013865	SRBD1	82	57.647	Equus_caballus
ENSSMAG00000018256	si:ch211-117n7.8	99	64.171	ENSELUG00000012592	si:ch211-117n7.8	99	64.190	Esox_lucius
ENSSMAG00000018256	si:ch211-117n7.8	89	54.644	ENSFCAG00000005101	SRBD1	90	54.545	Felis_catus
ENSSMAG00000018256	si:ch211-117n7.8	82	57.432	ENSFALG00000012966	SRBD1	99	51.220	Ficedula_albicollis
ENSSMAG00000018256	si:ch211-117n7.8	92	53.692	ENSFDAG00000016670	SRBD1	96	53.797	Fukomys_damarensis
ENSSMAG00000018256	si:ch211-117n7.8	100	77.680	ENSFHEG00000019480	si:ch211-117n7.8	100	77.680	Fundulus_heteroclitus
ENSSMAG00000018256	si:ch211-117n7.8	97	52.800	ENSGALG00000009990	SRBD1	99	51.934	Gallus_gallus
ENSSMAG00000018256	si:ch211-117n7.8	100	76.511	ENSGAFG00000019664	si:ch211-117n7.8	100	76.608	Gambusia_affinis
ENSSMAG00000018256	si:ch211-117n7.8	61	82.171	ENSGACG00000010794	si:ch211-117n7.8	100	82.171	Gasterosteus_aculeatus
ENSSMAG00000018256	si:ch211-117n7.8	82	58.560	ENSGAGG00000006166	SRBD1	99	58.323	Gopherus_agassizii
ENSSMAG00000018256	si:ch211-117n7.8	83	57.159	ENSGGOG00000005910	SRBD1	87	57.043	Gorilla_gorilla
ENSSMAG00000018256	si:ch211-117n7.8	97	67.771	ENSHBUG00000013207	si:ch211-117n7.8	100	67.771	Haplochromis_burtoni
ENSSMAG00000018256	si:ch211-117n7.8	92	53.125	ENSHGLG00000018153	-	96	53.027	Heterocephalus_glaber_female
ENSSMAG00000018256	si:ch211-117n7.8	92	53.125	ENSHGLG00100015183	-	96	53.027	Heterocephalus_glaber_male
ENSSMAG00000018256	si:ch211-117n7.8	94	63.768	ENSIPUG00000009661	srbd1	99	62.305	Ictalurus_punctatus
ENSSMAG00000018256	si:ch211-117n7.8	82	58.929	ENSSTOG00000005898	SRBD1	84	58.929	Ictidomys_tridecemlineatus
ENSSMAG00000018256	si:ch211-117n7.8	99	48.350	ENSJJAG00000022244	Srbd1	99	48.350	Jaculus_jaculus
ENSSMAG00000018256	si:ch211-117n7.8	99	79.317	ENSKMAG00000003473	si:ch211-117n7.8	100	79.317	Kryptolebias_marmoratus
ENSSMAG00000018256	si:ch211-117n7.8	100	80.645	ENSLBEG00000027518	si:ch211-117n7.8	100	80.645	Labrus_bergylta
ENSSMAG00000018256	si:ch211-117n7.8	82	58.137	ENSLACG00000009790	SRBD1	98	57.783	Latimeria_chalumnae
ENSSMAG00000018256	si:ch211-117n7.8	82	67.141	ENSLOCG00000016360	si:ch211-117n7.8	99	59.188	Lepisosteus_oculatus
ENSSMAG00000018256	si:ch211-117n7.8	83	57.159	ENSMFAG00000042026	SRBD1	84	57.043	Macaca_fascicularis
ENSSMAG00000018256	si:ch211-117n7.8	83	57.159	ENSMMUG00000003490	SRBD1	84	57.043	Macaca_mulatta
ENSSMAG00000018256	si:ch211-117n7.8	83	55.763	ENSMNEG00000034701	SRBD1	84	55.452	Macaca_nemestrina
ENSSMAG00000018256	si:ch211-117n7.8	94	52.772	ENSMLEG00000000745	SRBD1	98	51.673	Mandrillus_leucophaeus
ENSSMAG00000018256	si:ch211-117n7.8	100	80.333	ENSMAMG00000021921	si:ch211-117n7.8	100	80.626	Mastacembelus_armatus
ENSSMAG00000018256	si:ch211-117n7.8	100	81.152	ENSMZEG00005027369	si:ch211-117n7.8	100	81.152	Maylandia_zebra
ENSSMAG00000018256	si:ch211-117n7.8	78	56.049	ENSMGAG00000010273	SRBD1	99	55.980	Meleagris_gallopavo
ENSSMAG00000018256	si:ch211-117n7.8	76	56.597	ENSMAUG00000013916	Srbd1	95	56.350	Mesocricetus_auratus
ENSSMAG00000018256	si:ch211-117n7.8	82	58.402	ENSMICG00000007835	SRBD1	83	58.186	Microcebus_murinus
ENSSMAG00000018256	si:ch211-117n7.8	82	56.837	ENSMOCG00000018716	Srbd1	84	56.940	Microtus_ochrogaster
ENSSMAG00000018256	si:ch211-117n7.8	97	77.319	ENSMMOG00000007507	si:ch211-117n7.8	100	77.319	Mola_mola
ENSSMAG00000018256	si:ch211-117n7.8	100	81.366	ENSMALG00000001562	si:ch211-117n7.8	100	81.659	Monopterus_albus
ENSSMAG00000018256	si:ch211-117n7.8	83	56.840	MGP_CAROLIEiJ_G0021934	Srbd1	99	57.329	Mus_caroli
ENSSMAG00000018256	si:ch211-117n7.8	83	56.840	ENSMUSG00000024135	Srbd1	99	53.763	Mus_musculus
ENSSMAG00000018256	si:ch211-117n7.8	83	56.690	MGP_PahariEiJ_G0020924	Srbd1	85	56.824	Mus_pahari
ENSSMAG00000018256	si:ch211-117n7.8	83	56.690	MGP_SPRETEiJ_G0022850	Srbd1	85	56.404	Mus_spretus
ENSSMAG00000018256	si:ch211-117n7.8	93	53.237	ENSMLUG00000007039	SRBD1	95	53.038	Myotis_lucifugus
ENSSMAG00000018256	si:ch211-117n7.8	82	55.683	ENSNGAG00000011893	Srbd1	84	55.683	Nannospalax_galili
ENSSMAG00000018256	si:ch211-117n7.8	98	77.191	ENSNBRG00000012873	si:ch211-117n7.8	100	77.191	Neolamprologus_brichardi
ENSSMAG00000018256	si:ch211-117n7.8	83	56.927	ENSNLEG00000016877	SRBD1	84	56.810	Nomascus_leucogenys
ENSSMAG00000018256	si:ch211-117n7.8	82	57.569	ENSODEG00000012095	SRBD1	85	57.228	Octodon_degus
ENSSMAG00000018256	si:ch211-117n7.8	100	81.073	ENSONIG00000000945	si:ch211-117n7.8	100	84.235	Oreochromis_niloticus
ENSSMAG00000018256	si:ch211-117n7.8	93	52.935	ENSOCUG00000015385	SRBD1	99	51.096	Oryctolagus_cuniculus
ENSSMAG00000018256	si:ch211-117n7.8	100	71.331	ENSORLG00000004427	si:ch211-117n7.8	100	71.331	Oryzias_latipes
ENSSMAG00000018256	si:ch211-117n7.8	100	74.200	ENSORLG00020012792	si:ch211-117n7.8	100	74.200	Oryzias_latipes_hni
ENSSMAG00000018256	si:ch211-117n7.8	100	73.981	ENSORLG00015018598	si:ch211-117n7.8	100	73.981	Oryzias_latipes_hsok
ENSSMAG00000018256	si:ch211-117n7.8	99	72.059	ENSOMEG00000012229	si:ch211-117n7.8	99	75.472	Oryzias_melastigma
ENSSMAG00000018256	si:ch211-117n7.8	82	55.334	ENSOGAG00000001076	SRBD1	84	54.759	Otolemur_garnettii
ENSSMAG00000018256	si:ch211-117n7.8	82	53.620	ENSOARG00000005958	SRBD1	84	53.507	Ovis_aries
ENSSMAG00000018256	si:ch211-117n7.8	82	57.109	ENSPPAG00000038442	SRBD1	98	51.280	Pan_paniscus
ENSSMAG00000018256	si:ch211-117n7.8	89	54.811	ENSPPRG00000003449	SRBD1	89	55.214	Panthera_pardus
ENSSMAG00000018256	si:ch211-117n7.8	89	54.811	ENSPTIG00000012495	SRBD1	90	54.703	Panthera_tigris_altaica
ENSSMAG00000018256	si:ch211-117n7.8	82	57.227	ENSPTRG00000011889	SRBD1	98	51.378	Pan_troglodytes
ENSSMAG00000018256	si:ch211-117n7.8	94	52.669	ENSPANG00000008063	SRBD1	98	51.426	Papio_anubis
ENSSMAG00000018256	si:ch211-117n7.8	87	63.767	ENSPKIG00000021973	si:ch211-117n7.8	99	58.614	Paramormyrops_kingsleyae
ENSSMAG00000018256	si:ch211-117n7.8	82	57.479	ENSPSIG00000008992	SRBD1	99	50.862	Pelodiscus_sinensis
ENSSMAG00000018256	si:ch211-117n7.8	98	72.655	ENSPMGG00000013348	si:ch211-117n7.8	99	72.754	Periophthalmus_magnuspinnatus
ENSSMAG00000018256	si:ch211-117n7.8	82	55.684	ENSPEMG00000020684	Srbd1	84	55.272	Peromyscus_maniculatus_bairdii
ENSSMAG00000018256	si:ch211-117n7.8	100	76.998	ENSPFOG00000010650	si:ch211-117n7.8	100	76.998	Poecilia_formosa
ENSSMAG00000018256	si:ch211-117n7.8	100	77.193	ENSPLAG00000002141	si:ch211-117n7.8	100	77.193	Poecilia_latipinna
ENSSMAG00000018256	si:ch211-117n7.8	100	77.096	ENSPMEG00000018537	si:ch211-117n7.8	100	77.096	Poecilia_mexicana
ENSSMAG00000018256	si:ch211-117n7.8	100	74.561	ENSPREG00000003258	si:ch211-117n7.8	100	74.561	Poecilia_reticulata
ENSSMAG00000018256	si:ch211-117n7.8	85	52.114	ENSPPYG00000012444	SRBD1	97	48.330	Pongo_abelii
ENSSMAG00000018256	si:ch211-117n7.8	74	52.431	ENSPCAG00000005629	SRBD1	80	52.237	Procavia_capensis
ENSSMAG00000018256	si:ch211-117n7.8	82	49.297	ENSPCOG00000017669	SRBD1	83	49.415	Propithecus_coquereli
ENSSMAG00000018256	si:ch211-117n7.8	82	50.648	ENSPVAG00000001782	SRBD1	84	50.294	Pteropus_vampyrus
ENSSMAG00000018256	si:ch211-117n7.8	97	74.372	ENSPNYG00000000508	si:ch211-117n7.8	100	74.372	Pundamilia_nyererei
ENSSMAG00000018256	si:ch211-117n7.8	96	64.097	ENSPNAG00000013492	SRBD1	97	63.509	Pygocentrus_nattereri
ENSSMAG00000018256	si:ch211-117n7.8	81	56.886	ENSRNOG00000014720	Srbd1	83	56.563	Rattus_norvegicus
ENSSMAG00000018256	si:ch211-117n7.8	94	52.249	ENSRBIG00000033486	SRBD1	95	52.147	Rhinopithecus_bieti
ENSSMAG00000018256	si:ch211-117n7.8	94	52.249	ENSRROG00000041599	SRBD1	95	52.147	Rhinopithecus_roxellana
ENSSMAG00000018256	si:ch211-117n7.8	83	57.176	ENSSBOG00000024982	SRBD1	84	57.060	Saimiri_boliviensis_boliviensis
ENSSMAG00000018256	si:ch211-117n7.8	85	65.167	ENSSFOG00015001128	si:ch211-117n7.8	93	65.167	Scleropages_formosus
ENSSMAG00000018256	si:ch211-117n7.8	98	84.669	ENSSLDG00000023189	si:ch211-117n7.8	100	84.669	Seriola_lalandi_dorsalis
ENSSMAG00000018256	si:ch211-117n7.8	82	53.081	ENSSARG00000009740	SRBD1	85	52.656	Sorex_araneus
ENSSMAG00000018256	si:ch211-117n7.8	83	58.989	ENSSPUG00000010475	SRBD1	94	58.519	Sphenodon_punctatus
ENSSMAG00000018256	si:ch211-117n7.8	92	78.730	ENSSPAG00000008092	-	100	76.564	Stegastes_partitus
ENSSMAG00000018256	si:ch211-117n7.8	94	53.224	ENSSSCG00000008445	SRBD1	98	51.404	Sus_scrofa
ENSSMAG00000018256	si:ch211-117n7.8	82	57.294	ENSTGUG00000003878	SRBD1	100	57.311	Taeniopygia_guttata
ENSSMAG00000018256	si:ch211-117n7.8	100	74.439	ENSTRUG00000007080	si:ch211-117n7.8	99	78.627	Takifugu_rubripes
ENSSMAG00000018256	si:ch211-117n7.8	98	73.529	ENSTNIG00000007464	si:ch211-117n7.8	98	73.529	Tetraodon_nigroviridis
ENSSMAG00000018256	si:ch211-117n7.8	54	78.723	ENSTBEG00000004556	SRBD1	54	78.723	Tupaia_belangeri
ENSSMAG00000018256	si:ch211-117n7.8	74	59.259	ENSTTRG00000011871	SRBD1	74	59.239	Tursiops_truncatus
ENSSMAG00000018256	si:ch211-117n7.8	94	52.815	ENSUAMG00000008126	SRBD1	97	54.676	Ursus_americanus
ENSSMAG00000018256	si:ch211-117n7.8	94	52.821	ENSUMAG00000012902	SRBD1	98	51.013	Ursus_maritimus
ENSSMAG00000018256	si:ch211-117n7.8	82	56.874	ENSVPAG00000006825	SRBD1	92	56.808	Vicugna_pacos
ENSSMAG00000018256	si:ch211-117n7.8	93	53.244	ENSVVUG00000005389	SRBD1	99	51.066	Vulpes_vulpes
ENSSMAG00000018256	si:ch211-117n7.8	99	43.680	ENSXETG00000002760	srbd1	99	44.290	Xenopus_tropicalis
ENSSMAG00000018256	si:ch211-117n7.8	100	76.706	ENSXMAG00000016861	si:ch211-117n7.8	100	76.706	Xiphophorus_maculatus