EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000018455 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 4847 bases
Position: chr22:2601170-2606016
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000030096	GTP_EFTU	PF00009.27	1.1e-52	1	1
ENSSMAP00000030096	GTP_EFTU_D2	PF03144.25	1.1e-14	1	1
ENSSMAP00000030096	GTP_EFTU_D3	PF03143.17	2e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000030465	-	1392	-	ENSSMAP00000030096	463 (aa)	-	A0A2U9CXL6

Gene Model

Click here to download ENSSMAG00000018455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000018455's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000018455	-	98	66.886	ENSSMAG00000016143	si:dkey-37o8.1	100	66.886
ENSSMAG00000018455	-	99	84.199	ENSSMAG00000018483	-	100	84.199
ENSSMAG00000018455	-	92	81.967	ENSSMAG00000010349	eef1a1b	98	81.967
ENSSMAG00000018455	-	98	74.473	ENSSMAG00000018469	-	100	73.967
ENSSMAG00000018455	-	95	39.819	ENSSMAG00000010621	hbs1l	62	40.000
ENSSMAG00000018455	-	95	37.104	ENSSMAG00000014782	gspt1l	75	37.104
ENSSMAG00000018455	-	95	37.246	ENSSMAG00000007886	GSPT1	72	37.330
ENSSMAG00000018455	-	53	77.143	ENSSMAG00000016277	-	100	76.078
ENSSMAG00000018455	-	90	80.723	ENSSMAG00000019345	EEF1A1	79	80.723

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000018455	-	67	78.896	ENSAPOG00000004757	eef1a1l1	100	96.875	Acanthochromis_polyacanthus
ENSSMAG00000018455	-	99	78.959	ENSAMEG00000009677	-	100	78.959	Ailuropoda_melanoleuca
ENSSMAG00000018455	-	99	75.271	ENSAMEG00000004317	-	100	75.271	Ailuropoda_melanoleuca
ENSSMAG00000018455	-	99	79.393	ENSCAFG00000013249	-	100	79.393	Canis_familiaris
ENSSMAG00000018455	-	99	79.393	ENSCAFG00020020007	-	100	79.393	Canis_lupus_dingo
ENSSMAG00000018455	-	99	80.260	ENSCPBG00000000646	-	100	80.260	Chrysemys_picta_bellii
ENSSMAG00000018455	-	99	81.345	ENSCPBG00000000748	-	100	81.345	Chrysemys_picta_bellii
ENSSMAG00000018455	-	99	84.061	ENSDARG00000020850	eef1a1l1	99	84.061	Danio_rerio
ENSSMAG00000018455	-	85	77.157	ENSEASG00005018013	-	99	77.157	Equus_asinus_asinus
ENSSMAG00000018455	-	99	82.057	ENSEASG00005012365	-	96	82.701	Equus_asinus_asinus
ENSSMAG00000018455	-	99	79.826	ENSECAG00000022260	-	100	79.826	Equus_caballus
ENSSMAG00000018455	-	99	82.646	ENSELUG00000023536	eef1a1l1	100	82.646	Esox_lucius
ENSSMAG00000018455	-	99	82.213	ENSFCAG00000030530	-	100	82.213	Felis_catus
ENSSMAG00000018455	-	99	81.128	ENSGAGG00000000642	-	100	81.128	Gopherus_agassizii
ENSSMAG00000018455	-	99	80.694	ENSGAGG00000000648	-	100	80.694	Gopherus_agassizii
ENSSMAG00000018455	-	89	82.850	ENSLBEG00000002790	eef1a1l1	100	82.850	Labrus_bergylta
ENSSMAG00000018455	-	100	80.130	ENSLAFG00000028081	-	100	80.130	Loxodonta_africana
ENSSMAG00000018455	-	99	80.911	ENSLAFG00000025161	-	100	80.911	Loxodonta_africana
ENSSMAG00000018455	-	74	84.104	ENSOANG00000012066	-	100	84.104	Ornithorhynchus_anatinus
ENSSMAG00000018455	-	89	83.333	ENSOMEG00000006888	-	100	83.333	Oryzias_melastigma
ENSSMAG00000018455	-	99	80.477	ENSOARG00000002943	-	100	80.477	Ovis_aries
ENSSMAG00000018455	-	97	82.262	ENSPPRG00000005678	-	97	82.262	Panthera_pardus
ENSSMAG00000018455	-	99	78.742	ENSPPRG00000008525	-	100	78.742	Panthera_pardus
ENSSMAG00000018455	-	99	80.477	ENSPTIG00000006939	-	100	80.477	Panthera_tigris_altaica
ENSSMAG00000018455	-	99	80.911	ENSPSIG00000008610	-	100	80.911	Pelodiscus_sinensis
ENSSMAG00000018455	-	65	95.370	ENSPVAG00000007682	-	65	95.370	Pteropus_vampyrus
ENSSMAG00000018455	-	99	81.128	ENSSPUG00000003655	-	100	81.128	Sphenodon_punctatus
ENSSMAG00000018455	-	98	79.204	ENSSSCG00000038035	-	100	78.525	Sus_scrofa
ENSSMAG00000018455	-	99	82.646	ENSSSCG00000034113	-	100	82.646	Sus_scrofa
ENSSMAG00000018455	-	99	70.716	ENSUAMG00000007676	-	100	70.716	Ursus_americanus
ENSSMAG00000018455	-	99	77.007	ENSUAMG00000008928	-	100	77.007	Ursus_americanus
ENSSMAG00000018455	-	99	78.742	ENSUMAG00000013211	-	100	78.742	Ursus_maritimus
ENSSMAG00000018455	-	99	79.176	ENSVVUG00000026886	-	100	79.176	Vulpes_vulpes
ENSSMAG00000018455	-	99	82.900	ENSXETG00000022604	eef1a1o	100	82.900	Xenopus_tropicalis