EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000018469 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 2501 bases
Position: chr22:2607383-2609883
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000030126	GTP_EFTU	PF00009.27	9e-53	1	1
ENSSMAP00000030126	GTP_EFTU_D3	PF03143.17	2.2e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000030497	-	1452	-	ENSSMAP00000030126	483 (aa)	-	UPI000D7DB0E9

Gene Model

Click here to download ENSSMAG00000018469's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000018469's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000018469	-	55	78.571	ENSSMAG00000016277	-	94	89.326
ENSSMAG00000018469	-	90	75.515	ENSSMAG00000019345	EEF1A1	77	75.878
ENSSMAG00000018469	-	100	79.959	ENSSMAG00000018483	-	97	80.426
ENSSMAG00000018469	-	95	37.826	ENSSMAG00000010621	hbs1l	62	37.609
ENSSMAG00000018469	-	100	73.967	ENSSMAG00000018455	-	98	74.473
ENSSMAG00000018469	-	98	63.789	ENSSMAG00000016143	si:dkey-37o8.1	99	63.636
ENSSMAG00000018469	-	93	77.506	ENSSMAG00000010349	eef1a1b	98	77.506
ENSSMAG00000018469	-	96	35.699	ENSSMAG00000014782	gspt1l	75	35.699
ENSSMAG00000018469	-	96	35.837	ENSSMAG00000007886	GSPT1	72	35.914

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000018469	-	98	81.607	ENSAPOG00000004714	-	98	81.607	Acanthochromis_polyacanthus
ENSSMAG00000018469	-	90	81.609	ENSACIG00000001219	-	97	81.412	Amphilophus_citrinellus
ENSSMAG00000018469	-	88	82.824	ENSAOCG00000022002	-	98	82.824	Amphiprion_ocellaris
ENSSMAG00000018469	-	100	81.988	ENSAOCG00000022039	-	98	82.241	Amphiprion_ocellaris
ENSSMAG00000018469	-	100	82.195	ENSAPEG00000016361	-	98	82.452	Amphiprion_percula
ENSSMAG00000018469	-	98	82.664	ENSATEG00000003244	-	95	82.664	Anabas_testudineus
ENSSMAG00000018469	-	100	82.816	ENSACLG00000022560	-	98	82.664	Astatotilapia_calliptera
ENSSMAG00000018469	-	100	75.000	WBGene00001169	eef-1A.2	87	92.537	Caenorhabditis_elegans
ENSSMAG00000018469	-	100	75.000	WBGene00001168	eef-1A.1	98	75.316	Caenorhabditis_elegans
ENSSMAG00000018469	-	98	71.849	ENSCING00000018894	-	97	71.849	Ciona_intestinalis
ENSSMAG00000018469	-	99	74.167	ENSCING00000021478	-	98	74.522	Ciona_intestinalis
ENSSMAG00000018469	-	98	73.053	ENSCING00000005126	-	98	73.053	Ciona_intestinalis
ENSSMAG00000018469	-	100	69.939	ENSCING00000007703	-	95	70.940	Ciona_intestinalis
ENSSMAG00000018469	-	99	67.983	ENSCSAVG00000001085	-	89	69.099	Ciona_savignyi
ENSSMAG00000018469	-	98	73.375	ENSCSAVG00000009663	-	98	73.375	Ciona_savignyi
ENSSMAG00000018469	-	98	72.917	ENSCSAVG00000003196	-	98	72.917	Ciona_savignyi
ENSSMAG00000018469	-	99	74.739	ENSCSAVG00000006357	-	90	88.889	Ciona_savignyi
ENSSMAG00000018469	-	90	74.654	ENSCSEG00000007992	-	97	74.588	Cynoglossus_semilaevis
ENSSMAG00000018469	-	90	75.229	ENSCSEG00000007972	-	98	75.352	Cynoglossus_semilaevis
ENSSMAG00000018469	-	98	83.298	ENSCSEG00000008011	-	98	83.298	Cynoglossus_semilaevis
ENSSMAG00000018469	-	98	83.298	ENSCVAG00000019356	-	98	83.298	Cyprinodon_variegatus
ENSSMAG00000018469	-	100	77.479	FBgn0284245	eEF1alpha1	97	77.660	Drosophila_melanogaster
ENSSMAG00000018469	-	98	76.582	FBgn0000557	eEF1alpha2	98	76.582	Drosophila_melanogaster
ENSSMAG00000018469	-	99	73.859	ENSEBUG00000015814	-	98	74.207	Eptatretus_burgeri
ENSSMAG00000018469	-	98	83.510	ENSFHEG00000015054	-	98	83.510	Fundulus_heteroclitus
ENSSMAG00000018469	-	98	83.510	ENSGAFG00000014646	-	98	83.510	Gambusia_affinis
ENSSMAG00000018469	-	98	83.721	ENSGACG00000002182	-	98	83.721	Gasterosteus_aculeatus
ENSSMAG00000018469	-	100	82.402	ENSGACG00000002143	-	98	82.452	Gasterosteus_aculeatus
ENSSMAG00000018469	-	57	75.547	ENSHBUG00000017166	-	91	75.000	Haplochromis_burtoni
ENSSMAG00000018469	-	98	82.664	ENSHCOG00000008468	-	98	82.664	Hippocampus_comes
ENSSMAG00000018469	-	99	77.433	ENSHCOG00000008489	-	96	78.233	Hippocampus_comes
ENSSMAG00000018469	-	99	75.311	ENSLBEG00000002955	-	98	75.264	Labrus_bergylta
ENSSMAG00000018469	-	98	82.452	ENSLBEG00000002759	-	98	82.452	Labrus_bergylta
ENSSMAG00000018469	-	98	83.087	ENSMAMG00000007715	-	98	83.087	Mastacembelus_armatus
ENSSMAG00000018469	-	99	76.556	ENSMMOG00000001106	-	98	76.744	Mola_mola
ENSSMAG00000018469	-	98	80.973	ENSMMOG00000001165	-	94	94.118	Mola_mola
ENSSMAG00000018469	-	99	68.750	ENSMMOG00000018160	-	91	86.957	Mola_mola
ENSSMAG00000018469	-	100	72.727	ENSNBRG00000017346	-	97	72.363	Neolamprologus_brichardi
ENSSMAG00000018469	-	77	77.540	ENSONIG00000017760	-	98	77.540	Oreochromis_niloticus
ENSSMAG00000018469	-	98	83.298	ENSORLG00000007614	eef1a	98	83.298	Oryzias_latipes
ENSSMAG00000018469	-	100	82.887	ENSORLG00015002397	-	98	83.510	Oryzias_latipes_hsok
ENSSMAG00000018469	-	98	83.298	ENSOMEG00000018226	-	98	83.298	Oryzias_melastigma
ENSSMAG00000018469	-	80	58.937	ENSPMGG00000022427	-	93	62.500	Periophthalmus_magnuspinnatus
ENSSMAG00000018469	-	98	82.911	ENSPMGG00000023911	-	94	95.294	Periophthalmus_magnuspinnatus
ENSSMAG00000018469	-	98	83.510	ENSPFOG00000003924	-	97	83.510	Poecilia_formosa
ENSSMAG00000018469	-	98	83.510	ENSPLAG00000004316	-	98	83.510	Poecilia_latipinna
ENSSMAG00000018469	-	98	83.298	ENSPMEG00000001010	-	98	83.298	Poecilia_mexicana
ENSSMAG00000018469	-	100	82.231	ENSPREG00000008243	-	98	83.087	Poecilia_reticulata
ENSSMAG00000018469	-	100	82.816	ENSPNYG00000007263	-	98	82.664	Pundamilia_nyererei
ENSSMAG00000018469	-	96	72.198	YBR118W	TEF2	98	71.247	Saccharomyces_cerevisiae
ENSSMAG00000018469	-	96	72.198	YPR080W	TEF1	98	71.247	Saccharomyces_cerevisiae
ENSSMAG00000018469	-	98	83.087	ENSSDUG00000008198	-	98	83.087	Seriola_dumerili
ENSSMAG00000018469	-	98	81.224	ENSSPAG00000001710	-	98	81.224	Stegastes_partitus
ENSSMAG00000018469	-	99	77.178	ENSTRUG00000005066	-	98	77.378	Takifugu_rubripes
ENSSMAG00000018469	-	98	82.664	ENSTRUG00000005727	ef-1a	98	82.664	Takifugu_rubripes
ENSSMAG00000018469	-	99	73.859	ENSTNIG00000002617	-	94	75.212	Tetraodon_nigroviridis
ENSSMAG00000018469	-	98	83.510	ENSTNIG00000002619	-	98	83.510	Tetraodon_nigroviridis
ENSSMAG00000018469	-	98	83.510	ENSXCOG00000001542	-	94	94.118	Xiphophorus_couchianus