EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000018484 (Gene tree)
Gene ID: -
Gene Symbol: msi2a
Alias: cb746|fi47b09|msi2|wu:fb02d08|wu:fi32d12|wu:fi47b09
Full Name: musashi RNA-binding protein 2a
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 230731 bases
Position: chr4:14182274-14413004
Accession: ZDB-GENE-030826-25
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000030167	RRM_1	PF00076.22	2.1e-33	1	2
ENSSMAP00000030167	RRM_1	PF00076.22	2.1e-33	2	2
ENSSMAP00000030150	RRM_1	PF00076.22	3e-33	1	2
ENSSMAP00000030150	RRM_1	PF00076.22	3e-33	2	2
ENSSMAP00000030141	RRM_1	PF00076.22	4.7e-33	1	2
ENSSMAP00000030141	RRM_1	PF00076.22	4.7e-33	2	2
ENSSMAP00000030131	RRM_1	PF00076.22	4.7e-33	1	2
ENSSMAP00000030131	RRM_1	PF00076.22	4.7e-33	2	2
ENSSMAP00000030188	RRM_1	PF00076.22	4.4e-29	1	2
ENSSMAP00000030188	RRM_1	PF00076.22	4.4e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000030559	-	942	-	ENSSMAP00000030188	313 (aa)	-	-
ENSSMAT00000030520	-	1073	-	ENSSMAP00000030150	347 (aa)	-	UPI0009B398B4
ENSSMAT00000030501	-	1227	-	ENSSMAP00000030131	408 (aa)	-	-
ENSSMAT00000030537	-	953	-	ENSSMAP00000030167	307 (aa)	-	UPI000CE1BD41
ENSSMAT00000030511	-	1253	-	ENSSMAP00000030141	407 (aa)	-	UPI000CE2848D

Gene Model

Click here to download ENSSMAG00000018484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000018484's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000018484	msi2a	59	49.057	ENSSMAG00000003760	hnrnpaba	84	46.667
ENSSMAG00000018484	msi2a	100	72.785	ENSSMAG00000018824	MSI1	100	72.785
ENSSMAG00000018484	msi2a	61	40.000	ENSSMAG00000015218	hnrnpa3	85	35.106
ENSSMAG00000018484	msi2a	55	38.372	ENSSMAG00000010246	-	86	37.297
ENSSMAG00000018484	msi2a	59	35.185	ENSSMAG00000010279	-	94	35.185
ENSSMAG00000018484	msi2a	57	48.276	ENSSMAG00000009686	hnrnpd	58	46.524
ENSSMAG00000018484	msi2a	57	41.860	ENSSMAG00000004641	hnrnpa1a	66	40.909
ENSSMAG00000018484	msi2a	60	42.529	ENSSMAG00000021047	dazap1	50	42.941
ENSSMAG00000018484	msi2a	96	69.847	ENSSMAG00000009156	-	71	69.466

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000018484	msi2a	100	88.110	ENSG00000153944	MSI2	97	93.227	Homo_sapiens
ENSSMAG00000018484	msi2a	100	100.000	ENSAPOG00000001658	msi2a	100	100.000	Acanthochromis_polyacanthus
ENSSMAG00000018484	msi2a	98	84.356	ENSAMEG00000002697	MSI2	99	88.650	Ailuropoda_melanoleuca
ENSSMAG00000018484	msi2a	99	100.000	ENSACIG00000009475	msi2a	100	90.268	Amphilophus_citrinellus
ENSSMAG00000018484	msi2a	56	91.111	ENSAOCG00000014822	msi2a	69	91.111	Amphiprion_ocellaris
ENSSMAG00000018484	msi2a	100	99.712	ENSAPEG00000007706	msi2a	100	99.712	Amphiprion_percula
ENSSMAG00000018484	msi2a	100	100.000	ENSATEG00000010498	msi2a	100	100.000	Anabas_testudineus
ENSSMAG00000018484	msi2a	93	92.806	ENSATEG00000003301	-	100	92.806	Anabas_testudineus
ENSSMAG00000018484	msi2a	93	93.011	ENSACAG00000005452	MSI2	88	75.871	Anolis_carolinensis
ENSSMAG00000018484	msi2a	100	88.110	ENSANAG00000037827	MSI2	97	93.227	Aotus_nancymaae
ENSSMAG00000018484	msi2a	100	99.754	ENSACLG00000007752	msi2a	100	99.754	Astatotilapia_calliptera
ENSSMAG00000018484	msi2a	100	96.296	ENSAMXG00000010474	msi2b	100	94.249	Astyanax_mexicanus
ENSSMAG00000018484	msi2a	100	96.296	ENSAMXG00000032796	msi2a	97	96.414	Astyanax_mexicanus
ENSSMAG00000018484	msi2a	98	88.961	ENSBTAG00000004406	MSI2	94	94.348	Bos_taurus
ENSSMAG00000018484	msi2a	76	59.514	WBGene00003423	msi-1	73	61.638	Caenorhabditis_elegans
ENSSMAG00000018484	msi2a	100	88.110	ENSCJAG00000013998	MSI2	97	93.227	Callithrix_jacchus
ENSSMAG00000018484	msi2a	94	87.580	ENSCAFG00020025620	MSI2	81	87.188	Canis_lupus_dingo
ENSSMAG00000018484	msi2a	100	87.195	ENSCHIG00000016580	MSI2	97	91.633	Capra_hircus
ENSSMAG00000018484	msi2a	93	88.298	ENSCPOG00000034042	MSI2	99	88.298	Cavia_porcellus
ENSSMAG00000018484	msi2a	100	88.110	ENSCCAG00000033927	MSI2	97	93.227	Cebus_capucinus
ENSSMAG00000018484	msi2a	93	92.444	ENSCATG00000040879	MSI2	97	92.829	Cercocebus_atys
ENSSMAG00000018484	msi2a	100	87.749	ENSCLAG00000014325	MSI2	100	88.184	Chinchilla_lanigera
ENSSMAG00000018484	msi2a	100	88.110	ENSCSAG00000005633	MSI2	97	93.227	Chlorocebus_sabaeus
ENSSMAG00000018484	msi2a	71	88.000	ENSCHOG00000008660	MSI2	83	86.275	Choloepus_hoffmanni
ENSSMAG00000018484	msi2a	100	87.692	ENSCPBG00000009942	MSI2	89	94.475	Chrysemys_picta_bellii
ENSSMAG00000018484	msi2a	87	53.171	ENSCING00000018579	-	90	52.632	Ciona_intestinalis
ENSSMAG00000018484	msi2a	87	53.667	ENSCSAVG00000010397	-	95	56.803	Ciona_savignyi
ENSSMAG00000018484	msi2a	93	92.444	ENSCANG00000036414	MSI2	100	88.615	Colobus_angolensis_palliatus
ENSSMAG00000018484	msi2a	100	87.538	ENSCGRG00001013330	Msi2	97	92.829	Cricetulus_griseus_chok1gshd
ENSSMAG00000018484	msi2a	98	84.098	ENSCGRG00000003141	Msi2	100	88.379	Cricetulus_griseus_crigri
ENSSMAG00000018484	msi2a	61	77.596	ENSCSEG00000013549	msi2a	100	77.596	Cynoglossus_semilaevis
ENSSMAG00000018484	msi2a	100	80.864	ENSCSEG00000003266	-	100	80.864	Cynoglossus_semilaevis
ENSSMAG00000018484	msi2a	81	80.928	ENSCSEG00000013557	msi2a	79	92.308	Cynoglossus_semilaevis
ENSSMAG00000018484	msi2a	100	100.000	ENSCVAG00000017075	msi2a	100	99.424	Cyprinodon_variegatus
ENSSMAG00000018484	msi2a	100	93.846	ENSDARG00000033901	msi2a	100	84.521	Danio_rerio
ENSSMAG00000018484	msi2a	100	97.119	ENSDARG00000032614	msi2b	100	97.030	Danio_rerio
ENSSMAG00000018484	msi2a	93	93.056	ENSDNOG00000014501	MSI2	100	93.056	Dasypus_novemcinctus
ENSSMAG00000018484	msi2a	55	96.460	ENSDORG00000028440	-	100	96.460	Dipodomys_ordii
ENSSMAG00000018484	msi2a	81	81.726	ENSDORG00000005394	Msi2	79	89.231	Dipodomys_ordii
ENSSMAG00000018484	msi2a	95	56.410	FBgn0260943	Rbp6	90	64.626	Drosophila_melanogaster
ENSSMAG00000018484	msi2a	72	72.368	ENSETEG00000012450	-	64	72.368	Echinops_telfairi
ENSSMAG00000018484	msi2a	93	63.898	ENSEBUG00000006732	msi2a	75	79.524	Eptatretus_burgeri
ENSSMAG00000018484	msi2a	93	90.301	ENSEASG00005002965	MSI2	97	80.114	Equus_asinus_asinus
ENSSMAG00000018484	msi2a	100	85.515	ENSECAG00000011435	MSI2	100	85.915	Equus_caballus
ENSSMAG00000018484	msi2a	86	77.778	ENSEEUG00000007810	MSI2	100	77.470	Erinaceus_europaeus
ENSSMAG00000018484	msi2a	100	95.902	ENSELUG00000001361	msi2b	100	88.358	Esox_lucius
ENSSMAG00000018484	msi2a	100	95.208	ENSELUG00000011747	msi2a	100	95.208	Esox_lucius
ENSSMAG00000018484	msi2a	100	88.110	ENSFCAG00000041686	MSI2	97	93.227	Felis_catus
ENSSMAG00000018484	msi2a	51	75.000	ENSFCAG00000033787	-	82	75.000	Felis_catus
ENSSMAG00000018484	msi2a	97	85.358	ENSFDAG00000016118	MSI2	100	88.650	Fukomys_damarensis
ENSSMAG00000018484	msi2a	100	100.000	ENSFHEG00000000084	msi2a	100	99.754	Fundulus_heteroclitus
ENSSMAG00000018484	msi2a	59	97.115	ENSGMOG00000007596	-	100	97.115	Gadus_morhua
ENSSMAG00000018484	msi2a	100	86.895	ENSGALG00000005567	MSI2	100	87.320	Gallus_gallus
ENSSMAG00000018484	msi2a	96	90.492	ENSGAFG00000006974	msi2a	96	96.364	Gambusia_affinis
ENSSMAG00000018484	msi2a	100	88.934	ENSGAGG00000016542	MSI2	100	85.246	Gopherus_agassizii
ENSSMAG00000018484	msi2a	93	92.444	ENSGGOG00000013182	MSI2	100	88.615	Gorilla_gorilla
ENSSMAG00000018484	msi2a	100	99.754	ENSHBUG00000020800	msi2a	100	99.754	Haplochromis_burtoni
ENSSMAG00000018484	msi2a	100	78.917	ENSHGLG00000012444	MSI2	100	79.251	Heterocephalus_glaber_female
ENSSMAG00000018484	msi2a	55	96.491	ENSHGLG00100004028	-	87	96.491	Heterocephalus_glaber_male
ENSSMAG00000018484	msi2a	78	84.058	ENSHGLG00100003744	MSI2	100	84.615	Heterocephalus_glaber_male
ENSSMAG00000018484	msi2a	100	99.588	ENSHCOG00000000266	msi2a	100	98.526	Hippocampus_comes
ENSSMAG00000018484	msi2a	95	82.422	ENSHCOG00000017241	-	98	71.820	Hippocampus_comes
ENSSMAG00000018484	msi2a	100	95.062	ENSIPUG00000021097	msi2a	100	95.062	Ictalurus_punctatus
ENSSMAG00000018484	msi2a	100	96.296	ENSIPUG00000003732	msi2b	100	90.096	Ictalurus_punctatus
ENSSMAG00000018484	msi2a	93	88.298	ENSSTOG00000007884	MSI2	99	88.298	Ictidomys_tridecemlineatus
ENSSMAG00000018484	msi2a	55	96.460	ENSJJAG00000009467	-	100	96.460	Jaculus_jaculus
ENSSMAG00000018484	msi2a	78	78.894	ENSJJAG00000006292	-	100	78.392	Jaculus_jaculus
ENSSMAG00000018484	msi2a	100	99.588	ENSKMAG00000009494	msi2a	97	99.602	Kryptolebias_marmoratus
ENSSMAG00000018484	msi2a	93	86.528	ENSLBEG00000026223	-	100	86.528	Labrus_bergylta
ENSSMAG00000018484	msi2a	100	100.000	ENSLBEG00000007061	msi2a	100	99.755	Labrus_bergylta
ENSSMAG00000018484	msi2a	55	92.941	ENSLACG00000016798	MSI2	98	92.308	Latimeria_chalumnae
ENSSMAG00000018484	msi2a	100	97.119	ENSLOCG00000004675	msi2b	100	88.452	Lepisosteus_oculatus
ENSSMAG00000018484	msi2a	93	92.444	ENSMFAG00000003775	MSI2	100	88.615	Macaca_fascicularis
ENSSMAG00000018484	msi2a	93	92.444	ENSMMUG00000002069	MSI2	100	88.615	Macaca_mulatta
ENSSMAG00000018484	msi2a	100	88.110	ENSMNEG00000045275	MSI2	97	93.227	Macaca_nemestrina
ENSSMAG00000018484	msi2a	93	92.444	ENSMLEG00000033888	MSI2	100	88.615	Mandrillus_leucophaeus
ENSSMAG00000018484	msi2a	100	99.674	ENSMAMG00000010503	msi2a	100	100.000	Mastacembelus_armatus
ENSSMAG00000018484	msi2a	100	94.650	ENSMAMG00000002488	-	99	94.040	Mastacembelus_armatus
ENSSMAG00000018484	msi2a	100	99.754	ENSMZEG00005007676	msi2a	100	99.754	Maylandia_zebra
ENSSMAG00000018484	msi2a	100	87.216	ENSMAUG00000003862	Msi2	100	87.644	Mesocricetus_auratus
ENSSMAG00000018484	msi2a	100	71.264	ENSMICG00000032913	-	96	79.710	Microcebus_murinus
ENSSMAG00000018484	msi2a	100	88.110	ENSMICG00000013598	-	97	93.227	Microcebus_murinus
ENSSMAG00000018484	msi2a	100	87.464	ENSMOCG00000005820	Msi2	100	87.896	Microtus_ochrogaster
ENSSMAG00000018484	msi2a	96	93.827	ENSMMOG00000008348	msi2a	90	100.000	Mola_mola
ENSSMAG00000018484	msi2a	78	83.575	ENSMODG00000014790	MSI2	100	84.135	Monodelphis_domestica
ENSSMAG00000018484	msi2a	100	100.000	ENSMALG00000000071	msi2a	100	100.000	Monopterus_albus
ENSSMAG00000018484	msi2a	100	87.805	MGP_CAROLIEiJ_G0016948	Msi2	100	96.460	Mus_caroli
ENSSMAG00000018484	msi2a	100	87.805	ENSMUSG00000069769	Msi2	100	96.460	Mus_musculus
ENSSMAG00000018484	msi2a	100	87.805	MGP_PahariEiJ_G0018079	Msi2	100	96.460	Mus_pahari
ENSSMAG00000018484	msi2a	100	87.805	MGP_SPRETEiJ_G0017795	Msi2	100	96.460	Mus_spretus
ENSSMAG00000018484	msi2a	98	89.286	ENSMPUG00000015377	MSI2	94	94.348	Mustela_putorius_furo
ENSSMAG00000018484	msi2a	98	89.286	ENSMLUG00000007865	MSI2	94	93.913	Myotis_lucifugus
ENSSMAG00000018484	msi2a	100	87.464	ENSNGAG00000017807	Msi2	100	87.896	Nannospalax_galili
ENSSMAG00000018484	msi2a	100	99.681	ENSNBRG00000014596	msi2a	100	99.681	Neolamprologus_brichardi
ENSSMAG00000018484	msi2a	93	92.444	ENSNLEG00000008059	MSI2	96	92.891	Nomascus_leucogenys
ENSSMAG00000018484	msi2a	72	83.553	ENSOPRG00000000872	-	64	83.553	Ochotona_princeps
ENSSMAG00000018484	msi2a	100	87.749	ENSODEG00000011974	MSI2	100	88.184	Octodon_degus
ENSSMAG00000018484	msi2a	62	100.000	ENSONIG00000001972	msi2a	84	100.000	Oreochromis_niloticus
ENSSMAG00000018484	msi2a	97	92.308	ENSOANG00000005667	MSI2	99	78.960	Ornithorhynchus_anatinus
ENSSMAG00000018484	msi2a	98	89.286	ENSOCUG00000010440	MSI2	94	94.348	Oryctolagus_cuniculus
ENSSMAG00000018484	msi2a	100	100.000	ENSORLG00000009671	msi2a	100	100.000	Oryzias_latipes
ENSSMAG00000018484	msi2a	100	100.000	ENSORLG00020021556	msi2a	100	100.000	Oryzias_latipes_hni
ENSSMAG00000018484	msi2a	100	100.000	ENSORLG00015004592	msi2a	100	100.000	Oryzias_latipes_hsok
ENSSMAG00000018484	msi2a	100	100.000	ENSOMEG00000000146	msi2a	100	100.000	Oryzias_melastigma
ENSSMAG00000018484	msi2a	98	85.714	ENSOGAG00000005621	MSI2	97	89.565	Otolemur_garnettii
ENSSMAG00000018484	msi2a	97	85.358	ENSPPAG00000037697	MSI2	100	88.615	Pan_paniscus
ENSSMAG00000018484	msi2a	97	90.429	ENSPPRG00000001848	MSI2	91	94.348	Panthera_pardus
ENSSMAG00000018484	msi2a	78	75.314	ENSPTIG00000021873	-	91	75.314	Panthera_tigris_altaica
ENSSMAG00000018484	msi2a	94	87.658	ENSPTIG00000021678	MSI2	96	88.141	Panthera_tigris_altaica
ENSSMAG00000018484	msi2a	93	92.444	ENSPTRG00000009437	MSI2	100	88.615	Pan_troglodytes
ENSSMAG00000018484	msi2a	100	88.110	ENSPANG00000022319	MSI2	97	93.227	Papio_anubis
ENSSMAG00000018484	msi2a	95	90.102	ENSPKIG00000007038	-	96	93.004	Paramormyrops_kingsleyae
ENSSMAG00000018484	msi2a	52	95.604	ENSPKIG00000017107	-	81	95.604	Paramormyrops_kingsleyae
ENSSMAG00000018484	msi2a	100	95.062	ENSPSIG00000008618	MSI2	100	81.176	Pelodiscus_sinensis
ENSSMAG00000018484	msi2a	100	99.042	ENSPMGG00000005888	msi2a	100	99.042	Periophthalmus_magnuspinnatus
ENSSMAG00000018484	msi2a	55	96.460	ENSPEMG00000021793	-	100	96.460	Peromyscus_maniculatus_bairdii
ENSSMAG00000018484	msi2a	100	86.072	ENSPCIG00000006063	MSI2	100	86.479	Phascolarctos_cinereus
ENSSMAG00000018484	msi2a	61	99.048	ENSPFOG00000019337	MSI2	92	99.048	Poecilia_formosa
ENSSMAG00000018484	msi2a	62	100.000	ENSPLAG00000000436	msi2a	76	96.479	Poecilia_latipinna
ENSSMAG00000018484	msi2a	56	100.000	ENSPMEG00000013247	msi2a	75	100.000	Poecilia_mexicana
ENSSMAG00000018484	msi2a	100	100.000	ENSPREG00000000881	msi2a	100	99.509	Poecilia_reticulata
ENSSMAG00000018484	msi2a	93	89.916	ENSPPYG00000008244	-	100	89.916	Pongo_abelii
ENSSMAG00000018484	msi2a	90	64.286	ENSPCAG00000010552	MSI2	95	89.231	Procavia_capensis
ENSSMAG00000018484	msi2a	55	95.420	ENSPCOG00000019195	-	93	96.154	Propithecus_coquereli
ENSSMAG00000018484	msi2a	93	85.274	ENSPVAG00000017053	MSI2	99	85.274	Pteropus_vampyrus
ENSSMAG00000018484	msi2a	100	99.754	ENSPNYG00000018393	msi2a	100	99.754	Pundamilia_nyererei
ENSSMAG00000018484	msi2a	100	95.885	ENSPNAG00000014957	msi2a	100	94.268	Pygocentrus_nattereri
ENSSMAG00000018484	msi2a	100	96.296	ENSPNAG00000000844	msi2b	100	93.949	Pygocentrus_nattereri
ENSSMAG00000018484	msi2a	93	92.806	ENSRNOG00000025338	Msi2	100	92.806	Rattus_norvegicus
ENSSMAG00000018484	msi2a	51	73.626	ENSRBIG00000032064	-	84	88.158	Rhinopithecus_bieti
ENSSMAG00000018484	msi2a	55	96.491	ENSRROG00000034421	-	92	96.491	Rhinopithecus_roxellana
ENSSMAG00000018484	msi2a	93	92.857	ENSSBOG00000026425	MSI2	100	88.615	Saimiri_boliviensis_boliviensis
ENSSMAG00000018484	msi2a	97	85.358	ENSSHAG00000008672	MSI2	100	88.615	Sarcophilus_harrisii
ENSSMAG00000018484	msi2a	100	83.673	ENSSFOG00015012168	msi2b	100	68.765	Scleropages_formosus
ENSSMAG00000018484	msi2a	97	87.129	ENSSFOG00015021687	-	97	93.243	Scleropages_formosus
ENSSMAG00000018484	msi2a	100	84.179	ENSSDUG00000021968	-	99	94.040	Seriola_dumerili
ENSSMAG00000018484	msi2a	100	100.000	ENSSDUG00000014507	msi2a	100	100.000	Seriola_dumerili
ENSSMAG00000018484	msi2a	100	100.000	ENSSLDG00000017172	msi2a	100	100.000	Seriola_lalandi_dorsalis
ENSSMAG00000018484	msi2a	62	92.405	ENSSPUG00000000913	-	94	92.405	Sphenodon_punctatus
ENSSMAG00000018484	msi2a	100	100.000	ENSSPAG00000017793	msi2a	100	100.000	Stegastes_partitus
ENSSMAG00000018484	msi2a	96	92.177	ENSSSCG00000038505	MSI2	100	93.416	Sus_scrofa
ENSSMAG00000018484	msi2a	78	84.058	ENSTGUG00000008452	MSI2	100	84.615	Taeniopygia_guttata
ENSSMAG00000018484	msi2a	97	98.731	ENSTRUG00000021248	msi2a	96	98.237	Takifugu_rubripes
ENSSMAG00000018484	msi2a	79	77.686	ENSTBEG00000001241	MSI2	73	77.686	Tupaia_belangeri
ENSSMAG00000018484	msi2a	93	84.454	ENSTTRG00000002189	MSI2	91	94.737	Tursiops_truncatus
ENSSMAG00000018484	msi2a	98	89.286	ENSUAMG00000000700	MSI2	96	94.595	Ursus_americanus
ENSSMAG00000018484	msi2a	89	92.213	ENSUMAG00000000505	MSI2	100	93.782	Ursus_maritimus
ENSSMAG00000018484	msi2a	59	81.868	ENSVPAG00000006837	-	62	81.868	Vicugna_pacos
ENSSMAG00000018484	msi2a	100	87.749	ENSVVUG00000011783	MSI2	98	92.411	Vulpes_vulpes
ENSSMAG00000018484	msi2a	99	98.438	ENSXCOG00000006113	msi2a	100	93.857	Xiphophorus_couchianus
ENSSMAG00000018484	msi2a	100	100.000	ENSXMAG00000000608	msi2a	100	99.754	Xiphophorus_maculatus