EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000018613 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 3022 bases
Position: chr12:19005953-19008974
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000030365	MMR_HSR1	PF01926.23	3.3e-07	1	1
ENSSMAP00000030379	MMR_HSR1	PF01926.23	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000030753	-	657	-	ENSSMAP00000030379	218 (aa)	-	-
ENSSMAT00000030739	-	657	-	ENSSMAP00000030365	218 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000018613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000018613's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000018613	-	76	53.614	ENSSMAG00000009201	rab1ba	83	53.614
ENSSMAG00000018613	-	74	31.792	ENSSMAG00000002148	rasl11a	67	31.792
ENSSMAG00000018613	-	78	38.068	ENSSMAG00000013733	rab33a	64	38.068
ENSSMAG00000018613	-	73	31.875	ENSSMAG00000013303	rheb	86	31.875
ENSSMAG00000018613	-	93	34.146	ENSSMAG00000017205	-	94	34.146
ENSSMAG00000018613	-	68	34.667	ENSSMAG00000008745	hrasb	85	35.802
ENSSMAG00000018613	-	74	36.646	ENSSMAG00000015774	rab41	76	36.646
ENSSMAG00000018613	-	53	30.000	ENSSMAG00000008394	arl4d	59	30.000
ENSSMAG00000018613	-	79	40.678	ENSSMAG00000006709	rab9b	84	40.678
ENSSMAG00000018613	-	83	40.437	ENSSMAG00000020311	rab42a	84	40.437
ENSSMAG00000018613	-	76	53.012	ENSSMAG00000017528	rab1ab	83	52.381
ENSSMAG00000018613	-	72	40.491	ENSSMAG00000011579	RAB7A	78	40.491
ENSSMAG00000018613	-	74	38.323	ENSSMAG00000017426	rab9a	78	38.323
ENSSMAG00000018613	-	76	35.503	ENSSMAG00000013945	si:dkey-13a21.4	82	35.503
ENSSMAG00000018613	-	77	52.381	ENSSMAG00000021049	-	83	52.381
ENSSMAG00000018613	-	79	32.558	ENSSMAG00000006341	rab23	80	32.461
ENSSMAG00000018613	-	75	42.424	ENSSMAG00000012678	rab12	84	37.963
ENSSMAG00000018613	-	72	39.877	ENSSMAG00000001414	-	69	39.877
ENSSMAG00000018613	-	74	35.404	ENSSMAG00000000335	rab6bb	77	35.404
ENSSMAG00000018613	-	53	40.171	ENSSMAG00000019926	rab34b	50	40.171
ENSSMAG00000018613	-	77	35.882	ENSSMAG00000004606	rabl2	72	35.882
ENSSMAG00000018613	-	96	42.180	ENSSMAG00000004416	-	99	42.180
ENSSMAG00000018613	-	77	51.497	ENSSMAG00000003166	rab14	78	51.497
ENSSMAG00000018613	-	78	45.029	ENSSMAG00000011814	rab18b	83	45.029
ENSSMAG00000018613	-	62	40.146	ENSSMAG00000020045	rab36	50	40.146
ENSSMAG00000018613	-	78	53.216	ENSSMAG00000001002	rab2a	99	46.226
ENSSMAG00000018613	-	81	35.028	ENSSMAG00000014984	rras	89	35.028
ENSSMAG00000018613	-	77	50.299	ENSSMAG00000018454	-	78	50.299
ENSSMAG00000018613	-	79	47.674	ENSSMAG00000002569	-	83	47.674
ENSSMAG00000018613	-	66	40.000	ENSSMAG00000012178	-	62	40.000
ENSSMAG00000018613	-	77	42.857	ENSSMAG00000010140	rab22a	88	42.857
ENSSMAG00000018613	-	100	84.862	ENSSMAG00000004133	rab11a	100	84.862
ENSSMAG00000018613	-	77	44.379	ENSSMAG00000002969	rab18a	82	44.379
ENSSMAG00000018613	-	76	43.373	ENSSMAG00000019773	rab15	78	43.373
ENSSMAG00000018613	-	86	38.542	ENSSMAG00000014078	RAB9A	92	38.542
ENSSMAG00000018613	-	99	82.028	ENSSMAG00000016206	rab11al	99	82.028
ENSSMAG00000018613	-	94	40.686	ENSSMAG00000009229	rab5aa	91	40.686
ENSSMAG00000018613	-	74	47.205	ENSSMAG00000007323	rab5c	73	47.205
ENSSMAG00000018613	-	80	43.103	ENSSMAG00000011769	si:dkey-16l2.16	92	38.756
ENSSMAG00000018613	-	78	36.416	ENSSMAG00000015955	rab33ba	72	36.416
ENSSMAG00000018613	-	79	47.399	ENSSMAG00000016376	-	87	47.399
ENSSMAG00000018613	-	78	45.029	ENSSMAG00000001953	rab39bb	80	45.029
ENSSMAG00000018613	-	96	39.048	ENSSMAG00000002500	rab30	94	42.105
ENSSMAG00000018613	-	70	33.548	ENSSMAG00000007370	kras	89	34.731
ENSSMAG00000018613	-	77	41.667	ENSSMAG00000005651	-	80	41.667
ENSSMAG00000018613	-	74	31.707	ENSSMAG00000004806	si:ch73-116o1.2	82	33.523
ENSSMAG00000018613	-	100	94.495	ENSSMAG00000004922	rab11bb	100	94.495
ENSSMAG00000018613	-	99	63.014	ENSSMAG00000009722	rab25a	99	63.014
ENSSMAG00000018613	-	100	58.257	ENSSMAG00000016183	rab25b	99	58.257
ENSSMAG00000018613	-	61	34.848	ENSSMAG00000018818	rab20	50	34.848
ENSSMAG00000018613	-	77	47.024	ENSSMAG00000000660	rab35b	99	42.105
ENSSMAG00000018613	-	78	33.880	ENSSMAG00000004343	rab34a	68	33.880
ENSSMAG00000018613	-	74	32.335	ENSSMAG00000014329	si:cabz01085950.1	82	32.335
ENSSMAG00000018613	-	83	39.130	ENSSMAG00000002229	zgc:101559	78	39.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000018613	-	100	94.954	ENSAPOG00000023455	rab11bb	100	94.954	Acanthochromis_polyacanthus
ENSSMAG00000018613	-	100	84.404	ENSACIG00000019631	rab11bb	100	84.404	Amphilophus_citrinellus
ENSSMAG00000018613	-	100	96.330	ENSACIG00000024376	-	100	96.330	Amphilophus_citrinellus
ENSSMAG00000018613	-	100	94.954	ENSAOCG00000018239	rab11bb	100	94.954	Amphiprion_ocellaris
ENSSMAG00000018613	-	100	96.330	ENSAOCG00000018849	-	100	96.330	Amphiprion_ocellaris
ENSSMAG00000018613	-	100	94.954	ENSAPEG00000016590	rab11bb	100	94.954	Amphiprion_percula
ENSSMAG00000018613	-	100	96.789	ENSATEG00000023725	-	100	96.789	Anabas_testudineus
ENSSMAG00000018613	-	100	94.954	ENSATEG00000017696	rab11bb	100	94.954	Anabas_testudineus
ENSSMAG00000018613	-	94	94.660	ENSAPLG00000011046	-	94	94.660	Anas_platyrhynchos
ENSSMAG00000018613	-	100	96.330	ENSACLG00000005446	-	100	96.330	Astatotilapia_calliptera
ENSSMAG00000018613	-	100	94.954	ENSACLG00000007076	rab11bb	100	94.954	Astatotilapia_calliptera
ENSSMAG00000018613	-	100	95.413	ENSAMXG00000042655	rab11bb	100	95.413	Astyanax_mexicanus
ENSSMAG00000018613	-	100	93.119	ENSAMXG00000037623	-	100	93.119	Astyanax_mexicanus
ENSSMAG00000018613	-	100	93.119	ENSBTAG00000002475	RAB11B	100	93.119	Bos_taurus
ENSSMAG00000018613	-	96	91.388	ENSCHIG00000022426	-	93	91.388	Capra_hircus
ENSSMAG00000018613	-	100	93.119	ENSCATG00000029188	-	100	93.119	Cercocebus_atys
ENSSMAG00000018613	-	100	94.037	ENSCPBG00000017056	-	100	94.037	Chrysemys_picta_bellii
ENSSMAG00000018613	-	100	94.954	ENSCSEG00000012149	rab11bb	100	94.954	Cynoglossus_semilaevis
ENSSMAG00000018613	-	100	95.872	ENSCSEG00000007239	-	100	95.872	Cynoglossus_semilaevis
ENSSMAG00000018613	-	100	95.413	ENSCVAG00000019718	-	100	95.413	Cyprinodon_variegatus
ENSSMAG00000018613	-	100	97.248	ENSCVAG00000019751	-	100	97.248	Cyprinodon_variegatus
ENSSMAG00000018613	-	100	94.954	ENSCVAG00000017021	-	100	94.954	Cyprinodon_variegatus
ENSSMAG00000018613	-	100	94.037	ENSDARG00000090086	rab11bb	100	94.037	Danio_rerio
ENSSMAG00000018613	-	99	90.783	ENSETEG00000000905	-	99	90.783	Echinops_telfairi
ENSSMAG00000018613	-	99	90.698	ENSEASG00005003708	-	99	90.698	Equus_asinus_asinus
ENSSMAG00000018613	-	99	90.698	ENSECAG00000000716	RAB11B	99	90.698	Equus_caballus
ENSSMAG00000018613	-	100	95.872	ENSELUG00000020948	-	98	100.000	Esox_lucius
ENSSMAG00000018613	-	100	94.954	ENSELUG00000000916	-	100	94.954	Esox_lucius
ENSSMAG00000018613	-	100	94.954	ENSELUG00000021148	rab11bb	100	94.954	Esox_lucius
ENSSMAG00000018613	-	100	94.037	ENSFALG00000011828	-	100	94.037	Ficedula_albicollis
ENSSMAG00000018613	-	100	94.954	ENSFHEG00000018353	rab11bb	100	94.954	Fundulus_heteroclitus
ENSSMAG00000018613	-	100	96.789	ENSFHEG00000022676	-	100	96.789	Fundulus_heteroclitus
ENSSMAG00000018613	-	99	94.907	ENSGMOG00000009668	-	99	94.907	Gadus_morhua
ENSSMAG00000018613	-	100	94.954	ENSGMOG00000009211	rab11bb	100	94.954	Gadus_morhua
ENSSMAG00000018613	-	100	94.037	ENSGALG00000000613	RAB11B	100	94.037	Gallus_gallus
ENSSMAG00000018613	-	100	94.954	ENSGAFG00000007102	rab11bb	100	94.954	Gambusia_affinis
ENSSMAG00000018613	-	100	94.495	ENSGACG00000015479	rab11bb	100	94.495	Gasterosteus_aculeatus
ENSSMAG00000018613	-	100	94.954	ENSGACG00000013297	-	99	94.954	Gasterosteus_aculeatus
ENSSMAG00000018613	-	100	93.119	ENSGGOG00000014516	RAB11B	100	93.119	Gorilla_gorilla
ENSSMAG00000018613	-	100	96.330	ENSHBUG00000009947	-	100	96.330	Haplochromis_burtoni
ENSSMAG00000018613	-	100	94.954	ENSHBUG00000014777	rab11bb	100	94.954	Haplochromis_burtoni
ENSSMAG00000018613	-	100	90.367	ENSHCOG00000000985	-	100	90.367	Hippocampus_comes
ENSSMAG00000018613	-	100	96.330	ENSHCOG00000000954	-	100	96.330	Hippocampus_comes
ENSSMAG00000018613	-	100	94.495	ENSHCOG00000002423	rab11bb	100	94.495	Hippocampus_comes
ENSSMAG00000018613	-	100	93.119	ENSIPUG00000025100	rab11b	100	93.119	Ictalurus_punctatus
ENSSMAG00000018613	-	100	94.954	ENSIPUG00000019927	rab11bb	100	94.954	Ictalurus_punctatus
ENSSMAG00000018613	-	100	96.330	ENSKMAG00000006170	-	100	96.330	Kryptolebias_marmoratus
ENSSMAG00000018613	-	100	94.954	ENSKMAG00000009033	rab11bb	100	94.954	Kryptolebias_marmoratus
ENSSMAG00000018613	-	100	95.413	ENSLBEG00000004172	-	100	95.413	Labrus_bergylta
ENSSMAG00000018613	-	100	88.073	ENSLBEG00000005981	-	100	88.073	Labrus_bergylta
ENSSMAG00000018613	-	100	94.954	ENSLBEG00000015248	rab11bb	100	94.954	Labrus_bergylta
ENSSMAG00000018613	-	100	94.037	ENSLACG00000016857	-	100	94.037	Latimeria_chalumnae
ENSSMAG00000018613	-	100	93.119	ENSMFAG00000003654	RAB11B	100	93.119	Macaca_fascicularis
ENSSMAG00000018613	-	100	93.119	ENSMLEG00000030601	-	100	93.119	Mandrillus_leucophaeus
ENSSMAG00000018613	-	100	95.413	ENSMAMG00000006378	rab11bb	100	95.413	Mastacembelus_armatus
ENSSMAG00000018613	-	100	95.872	ENSMAMG00000018533	-	100	95.872	Mastacembelus_armatus
ENSSMAG00000018613	-	100	96.330	ENSMZEG00005010975	-	100	96.330	Maylandia_zebra
ENSSMAG00000018613	-	100	94.954	ENSMZEG00005003352	rab11bb	100	94.954	Maylandia_zebra
ENSSMAG00000018613	-	100	93.119	ENSMICG00000034065	-	100	93.119	Microcebus_murinus
ENSSMAG00000018613	-	100	96.330	ENSMMOG00000001250	-	100	96.330	Mola_mola
ENSSMAG00000018613	-	99	94.931	ENSMMOG00000001238	-	99	94.931	Mola_mola
ENSSMAG00000018613	-	94	94.634	ENSMMOG00000007917	rab11bb	100	94.634	Mola_mola
ENSSMAG00000018613	-	100	94.037	ENSMODG00000003841	-	100	94.037	Monodelphis_domestica
ENSSMAG00000018613	-	100	94.954	ENSMALG00000022187	rab11bb	100	94.954	Monopterus_albus
ENSSMAG00000018613	-	94	85.507	ENSMLUG00000006677	-	100	85.507	Myotis_lucifugus
ENSSMAG00000018613	-	100	94.954	ENSNBRG00000000372	rab11bb	100	94.954	Neolamprologus_brichardi
ENSSMAG00000018613	-	100	96.330	ENSNBRG00000023885	-	100	96.330	Neolamprologus_brichardi
ENSSMAG00000018613	-	100	94.037	ENSMEUG00000003686	-	100	94.037	Notamacropus_eugenii
ENSSMAG00000018613	-	100	94.954	ENSONIG00000010435	rab11bb	100	94.954	Oreochromis_niloticus
ENSSMAG00000018613	-	100	96.330	ENSONIG00000002544	-	100	96.330	Oreochromis_niloticus
ENSSMAG00000018613	-	52	94.737	ENSOANG00000031567	-	82	94.737	Ornithorhynchus_anatinus
ENSSMAG00000018613	-	100	94.495	ENSORLG00000013938	rab11bb	100	94.495	Oryzias_latipes
ENSSMAG00000018613	-	99	94.931	ENSORLG00000015284	-	72	94.931	Oryzias_latipes
ENSSMAG00000018613	-	100	94.495	ENSORLG00020019393	rab11bb	100	94.495	Oryzias_latipes_hni
ENSSMAG00000018613	-	99	94.931	ENSORLG00020020844	RAB11B	99	94.931	Oryzias_latipes_hni
ENSSMAG00000018613	-	99	94.931	ENSORLG00015016999	RAB11B	99	94.931	Oryzias_latipes_hsok
ENSSMAG00000018613	-	100	94.495	ENSORLG00015020173	rab11bb	100	94.495	Oryzias_latipes_hsok
ENSSMAG00000018613	-	100	94.954	ENSOMEG00000017806	-	100	94.954	Oryzias_melastigma
ENSSMAG00000018613	-	100	95.872	ENSOMEG00000002562	-	100	95.872	Oryzias_melastigma
ENSSMAG00000018613	-	100	93.119	ENSPPAG00000028589	-	100	93.119	Pan_paniscus
ENSSMAG00000018613	-	100	93.119	ENSPTRG00000010422	RAB11B	100	93.119	Pan_troglodytes
ENSSMAG00000018613	-	100	93.119	ENSPANG00000007765	-	100	93.119	Papio_anubis
ENSSMAG00000018613	-	100	94.495	ENSPKIG00000011703	-	100	94.495	Paramormyrops_kingsleyae
ENSSMAG00000018613	-	100	94.954	ENSPKIG00000011640	rab11bb	100	94.954	Paramormyrops_kingsleyae
ENSSMAG00000018613	-	98	94.860	ENSPKIG00000001389	-	69	94.860	Paramormyrops_kingsleyae
ENSSMAG00000018613	-	98	90.411	ENSPSIG00000010242	-	85	90.411	Pelodiscus_sinensis
ENSSMAG00000018613	-	100	94.495	ENSPMGG00000014333	-	100	94.495	Periophthalmus_magnuspinnatus
ENSSMAG00000018613	-	100	94.954	ENSPMGG00000009435	rab11bb	100	94.954	Periophthalmus_magnuspinnatus
ENSSMAG00000018613	-	99	95.392	ENSPMGG00000014336	-	99	95.392	Periophthalmus_magnuspinnatus
ENSSMAG00000018613	-	97	93.396	ENSPCIG00000020371	-	99	93.396	Phascolarctos_cinereus
ENSSMAG00000018613	-	100	94.954	ENSPFOG00000024114	-	100	94.954	Poecilia_formosa
ENSSMAG00000018613	-	100	96.330	ENSPFOG00000006224	-	100	96.330	Poecilia_formosa
ENSSMAG00000018613	-	100	96.330	ENSPLAG00000014207	-	100	96.330	Poecilia_latipinna
ENSSMAG00000018613	-	100	94.954	ENSPLAG00000001598	rab11bb	100	94.954	Poecilia_latipinna
ENSSMAG00000018613	-	100	94.954	ENSPMEG00000012389	rab11bb	100	94.954	Poecilia_mexicana
ENSSMAG00000018613	-	100	96.330	ENSPMEG00000007842	-	100	96.330	Poecilia_mexicana
ENSSMAG00000018613	-	100	94.954	ENSPREG00000014269	rab11bb	100	94.954	Poecilia_reticulata
ENSSMAG00000018613	-	100	95.872	ENSPREG00000006336	-	100	95.872	Poecilia_reticulata
ENSSMAG00000018613	-	100	96.330	ENSPNYG00000019611	-	100	96.330	Pundamilia_nyererei
ENSSMAG00000018613	-	100	94.954	ENSPNYG00000004098	rab11bb	100	94.954	Pundamilia_nyererei
ENSSMAG00000018613	-	100	93.119	ENSRROG00000037812	-	100	93.119	Rhinopithecus_roxellana
ENSSMAG00000018613	-	97	92.925	ENSSHAG00000006816	-	97	92.925	Sarcophilus_harrisii
ENSSMAG00000018613	-	100	94.495	ENSSFOG00015009042	rab11bb	100	94.495	Scleropages_formosus
ENSSMAG00000018613	-	100	71.560	ENSSFOG00015006245	-	100	71.560	Scleropages_formosus
ENSSMAG00000018613	-	100	96.330	ENSSDUG00000002934	-	100	96.330	Seriola_dumerili
ENSSMAG00000018613	-	100	94.954	ENSSDUG00000013558	rab11bb	100	94.954	Seriola_dumerili
ENSSMAG00000018613	-	100	96.330	ENSSLDG00000005275	-	100	96.330	Seriola_lalandi_dorsalis
ENSSMAG00000018613	-	100	94.954	ENSSLDG00000020676	rab11bb	100	94.954	Seriola_lalandi_dorsalis
ENSSMAG00000018613	-	100	94.037	ENSSPUG00000002243	-	100	94.037	Sphenodon_punctatus
ENSSMAG00000018613	-	100	94.954	ENSSPAG00000011419	rab11bb	100	94.954	Stegastes_partitus
ENSSMAG00000018613	-	100	96.330	ENSSPAG00000014559	-	100	96.330	Stegastes_partitus
ENSSMAG00000018613	-	100	94.037	ENSTGUG00000000084	-	100	94.037	Taeniopygia_guttata
ENSSMAG00000018613	-	100	94.954	ENSTRUG00000022029	rab11bb	100	94.954	Takifugu_rubripes
ENSSMAG00000018613	-	99	95.833	ENSTRUG00000021619	-	100	95.833	Takifugu_rubripes
ENSSMAG00000018613	-	99	94.931	ENSTRUG00000021614	-	99	94.931	Takifugu_rubripes
ENSSMAG00000018613	-	93	95.074	ENSTNIG00000002003	-	100	95.074	Tetraodon_nigroviridis
ENSSMAG00000018613	-	99	95.833	ENSTNIG00000013182	-	100	95.833	Tetraodon_nigroviridis
ENSSMAG00000018613	-	99	94.470	ENSTNIG00000013184	-	99	94.470	Tetraodon_nigroviridis
ENSSMAG00000018613	-	100	94.037	ENSTNIG00000011081	rab11bb	100	94.037	Tetraodon_nigroviridis
ENSSMAG00000018613	-	94	93.659	ENSUAMG00000006639	-	99	93.659	Ursus_americanus
ENSSMAG00000018613	-	100	93.151	ENSXETG00000025484	rab11b.1	99	93.151	Xenopus_tropicalis
ENSSMAG00000018613	-	100	94.954	ENSXCOG00000008042	-	100	94.954	Xiphophorus_couchianus
ENSSMAG00000018613	-	100	96.330	ENSXCOG00000009190	-	100	96.330	Xiphophorus_couchianus
ENSSMAG00000018613	-	100	94.954	ENSXMAG00000011926	rab11bb	100	94.954	Xiphophorus_maculatus
ENSSMAG00000018613	-	100	95.872	ENSXMAG00000024840	-	100	95.872	Xiphophorus_maculatus