EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000018659 (Gene tree)
Gene ID: -
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 12027 bases
Position: chr1:19931496-19943522
Accession: ZDB-GENE-060810-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000030518	ResIII	PF04851.15	2.4e-09	1	1
ENSSMAP00000030771	ResIII	PF04851.15	5.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000031163	-	1892	-	ENSSMAP00000030785	320 (aa)	-	-
ENSSMAT00000030929	-	2345	-	ENSSMAP00000030560	303 (aa)	-	-
ENSSMAT00000030894	-	3288	-	ENSSMAP00000030518	945 (aa)	-	A0A2U9AY71
ENSSMAT00000031149	-	2568	-	ENSSMAP00000030771	855 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000018659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000018659's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000018659	rad54b	59	33.190	ENSSMAG00000017423	hells	57	33.772
ENSSMAG00000018659	rad54b	58	33.267	ENSSMAG00000019377	chd1l	50	32.465

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000018659	rad54b	99	54.176	ENSG00000197275	RAD54B	99	53.128	Homo_sapiens
ENSSMAG00000018659	rad54b	83	57.713	ENSG00000265817	FSBP	99	58.104	Homo_sapiens
ENSSMAG00000018659	rad54b	99	54.386	ENSAMEG00000005834	-	99	54.057	Ailuropoda_melanoleuca
ENSSMAG00000018659	rad54b	99	83.124	ENSACIG00000013005	rad54b	95	87.105	Amphilophus_citrinellus
ENSSMAG00000018659	rad54b	99	83.245	ENSAOCG00000008523	rad54b	99	82.821	Amphiprion_ocellaris
ENSSMAG00000018659	rad54b	99	76.844	ENSAPEG00000001673	rad54b	99	76.844	Amphiprion_percula
ENSSMAG00000018659	rad54b	99	85.381	ENSATEG00000001527	rad54b	99	86.909	Anabas_testudineus
ENSSMAG00000018659	rad54b	99	57.429	ENSAPLG00000014366	-	99	57.038	Anas_platyrhynchos
ENSSMAG00000018659	rad54b	90	60.714	ENSACAG00000003671	-	97	61.529	Anolis_carolinensis
ENSSMAG00000018659	rad54b	74	59.813	ENSANAG00000019528	-	99	60.310	Aotus_nancymaae
ENSSMAG00000018659	rad54b	99	83.702	ENSACLG00000007826	rad54b	97	87.374	Astatotilapia_calliptera
ENSSMAG00000018659	rad54b	90	68.000	ENSAMXG00000039985	rad54b	94	67.591	Astyanax_mexicanus
ENSSMAG00000018659	rad54b	99	54.198	ENSBTAG00000000632	RAD54B	86	59.422	Bos_taurus
ENSSMAG00000018659	rad54b	82	35.705	WBGene00013792	Y116A8C.13	97	33.642	Caenorhabditis_elegans
ENSSMAG00000018659	rad54b	99	54.286	ENSCJAG00000000080	-	99	58.379	Callithrix_jacchus
ENSSMAG00000018659	rad54b	99	54.317	ENSCAFG00000009179	RAD54B	99	53.010	Canis_familiaris
ENSSMAG00000018659	rad54b	99	54.426	ENSCAFG00020012084	-	99	53.115	Canis_lupus_dingo
ENSSMAG00000018659	rad54b	99	54.298	ENSCHIG00000008230	-	86	59.398	Capra_hircus
ENSSMAG00000018659	rad54b	99	54.874	ENSTSYG00000013234	-	99	54.651	Carlito_syrichta
ENSSMAG00000018659	rad54b	99	54.707	ENSCPOG00000011643	-	99	53.594	Cavia_porcellus
ENSSMAG00000018659	rad54b	99	54.785	ENSCCAG00000011754	-	99	58.516	Cebus_capucinus
ENSSMAG00000018659	rad54b	99	53.399	ENSCATG00000030661	-	99	57.729	Cercocebus_atys
ENSSMAG00000018659	rad54b	99	54.904	ENSCLAG00000010476	-	99	54.343	Chinchilla_lanigera
ENSSMAG00000018659	rad54b	99	53.474	ENSCSAG00000012712	-	99	53.165	Chlorocebus_sabaeus
ENSSMAG00000018659	rad54b	99	56.725	ENSCPBG00000003204	-	98	57.865	Chrysemys_picta_bellii
ENSSMAG00000018659	rad54b	99	54.083	ENSCANG00000017939	-	99	58.459	Colobus_angolensis_palliatus
ENSSMAG00000018659	rad54b	99	55.079	ENSCGRG00001020184	Rad54b	99	54.740	Cricetulus_griseus_chok1gshd
ENSSMAG00000018659	rad54b	99	53.639	ENSCGRG00000016752	Rad54b	99	53.363	Cricetulus_griseus_crigri
ENSSMAG00000018659	rad54b	99	81.998	ENSCSEG00000001601	rad54b	99	85.264	Cynoglossus_semilaevis
ENSSMAG00000018659	rad54b	99	78.833	ENSCVAG00000009200	rad54b	99	78.833	Cyprinodon_variegatus
ENSSMAG00000018659	rad54b	99	63.146	ENSDARG00000092134	rad54b	99	69.207	Danio_rerio
ENSSMAG00000018659	rad54b	99	54.526	ENSDNOG00000015535	-	99	54.526	Dasypus_novemcinctus
ENSSMAG00000018659	rad54b	99	56.384	ENSDORG00000002492	Rad54b	99	56.257	Dipodomys_ordii
ENSSMAG00000018659	rad54b	87	56.901	ENSETEG00000010605	-	100	56.780	Echinops_telfairi
ENSSMAG00000018659	rad54b	99	46.509	ENSEBUG00000009104	rad54b	98	45.585	Eptatretus_burgeri
ENSSMAG00000018659	rad54b	95	56.695	ENSEASG00005004021	-	89	58.396	Equus_asinus_asinus
ENSSMAG00000018659	rad54b	99	54.048	ENSECAG00000021949	-	99	53.417	Equus_caballus
ENSSMAG00000018659	rad54b	76	51.235	ENSEEUG00000008056	-	72	51.235	Erinaceus_europaeus
ENSSMAG00000018659	rad54b	97	78.608	ENSELUG00000009287	rad54b	99	72.936	Esox_lucius
ENSSMAG00000018659	rad54b	100	53.788	ENSFCAG00000015513	-	99	58.607	Felis_catus
ENSSMAG00000018659	rad54b	99	56.555	ENSFALG00000005467	-	99	54.855	Ficedula_albicollis
ENSSMAG00000018659	rad54b	99	54.545	ENSFDAG00000020541	-	99	53.263	Fukomys_damarensis
ENSSMAG00000018659	rad54b	94	79.777	ENSFHEG00000014382	rad54b	90	79.017	Fundulus_heteroclitus
ENSSMAG00000018659	rad54b	91	79.293	ENSGMOG00000014774	rad54b	98	81.139	Gadus_morhua
ENSSMAG00000018659	rad54b	99	57.313	ENSGALG00000043597	RAD54B	99	56.289	Gallus_gallus
ENSSMAG00000018659	rad54b	99	83.081	ENSGAFG00000007901	rad54b	98	83.965	Gambusia_affinis
ENSSMAG00000018659	rad54b	99	78.436	ENSGACG00000009128	rad54b	99	78.436	Gasterosteus_aculeatus
ENSSMAG00000018659	rad54b	99	56.865	ENSGAGG00000018747	-	99	56.649	Gopherus_agassizii
ENSSMAG00000018659	rad54b	99	53.968	ENSGGOG00000023516	-	99	53.968	Gorilla_gorilla
ENSSMAG00000018659	rad54b	98	85.106	ENSHBUG00000016017	rad54b	99	82.803	Haplochromis_burtoni
ENSSMAG00000018659	rad54b	99	53.813	ENSHGLG00000008263	RAD54B	98	52.731	Heterocephalus_glaber_female
ENSSMAG00000018659	rad54b	99	53.139	ENSHGLG00100008108	-	98	52.242	Heterocephalus_glaber_male
ENSSMAG00000018659	rad54b	99	74.270	ENSHCOG00000004764	rad54b	98	75.896	Hippocampus_comes
ENSSMAG00000018659	rad54b	99	60.515	ENSIPUG00000018531	rad54b	99	60.494	Ictalurus_punctatus
ENSSMAG00000018659	rad54b	99	53.142	ENSSTOG00000010791	-	99	53.032	Ictidomys_tridecemlineatus
ENSSMAG00000018659	rad54b	99	53.787	ENSJJAG00000010314	Rad54b	99	53.795	Jaculus_jaculus
ENSSMAG00000018659	rad54b	99	77.326	ENSKMAG00000004744	rad54b	99	77.146	Kryptolebias_marmoratus
ENSSMAG00000018659	rad54b	86	62.665	ENSLACG00000000859	-	100	62.714	Latimeria_chalumnae
ENSSMAG00000018659	rad54b	99	62.109	ENSLOCG00000010100	rad54b	94	68.120	Lepisosteus_oculatus
ENSSMAG00000018659	rad54b	91	56.599	ENSLAFG00000015315	-	97	56.835	Loxodonta_africana
ENSSMAG00000018659	rad54b	99	53.432	ENSMFAG00000031629	-	99	57.729	Macaca_fascicularis
ENSSMAG00000018659	rad54b	99	53.432	ENSMMUG00000005659	-	99	53.010	Macaca_mulatta
ENSSMAG00000018659	rad54b	99	53.432	ENSMNEG00000016408	-	99	53.128	Macaca_nemestrina
ENSSMAG00000018659	rad54b	99	53.560	ENSMLEG00000006946	-	99	53.010	Mandrillus_leucophaeus
ENSSMAG00000018659	rad54b	99	82.159	ENSMAMG00000012269	rad54b	99	82.273	Mastacembelus_armatus
ENSSMAG00000018659	rad54b	98	85.106	ENSMZEG00005005281	rad54b	95	87.247	Maylandia_zebra
ENSSMAG00000018659	rad54b	99	57.267	ENSMGAG00000012024	-	99	56.316	Meleagris_gallopavo
ENSSMAG00000018659	rad54b	99	54.791	ENSMAUG00000013586	Rad54b	99	54.791	Mesocricetus_auratus
ENSSMAG00000018659	rad54b	99	55.798	ENSMICG00000000754	-	99	55.798	Microcebus_murinus
ENSSMAG00000018659	rad54b	99	54.545	ENSMOCG00000020035	Rad54b	99	54.433	Microtus_ochrogaster
ENSSMAG00000018659	rad54b	100	79.279	ENSMMOG00000003394	rad54b	100	78.716	Mola_mola
ENSSMAG00000018659	rad54b	91	58.428	ENSMODG00000007343	-	97	58.913	Monodelphis_domestica
ENSSMAG00000018659	rad54b	74	85.871	ENSMALG00000001520	rad54b	99	86.916	Monopterus_albus
ENSSMAG00000018659	rad54b	99	55.269	MGP_CAROLIEiJ_G0025810	Rad54b	99	55.331	Mus_caroli
ENSSMAG00000018659	rad54b	99	55.107	ENSMUSG00000078773	Rad54b	99	54.994	Mus_musculus
ENSSMAG00000018659	rad54b	99	54.994	MGP_PahariEiJ_G0023933	Rad54b	99	54.770	Mus_pahari
ENSSMAG00000018659	rad54b	99	55.668	MGP_SPRETEiJ_G0026758	Rad54b	99	55.556	Mus_spretus
ENSSMAG00000018659	rad54b	91	59.114	ENSMPUG00000008878	-	96	59.114	Mustela_putorius_furo
ENSSMAG00000018659	rad54b	99	53.980	ENSMLUG00000008953	-	99	52.954	Myotis_lucifugus
ENSSMAG00000018659	rad54b	99	54.102	ENSNGAG00000017537	Rad54b	99	54.102	Nannospalax_galili
ENSSMAG00000018659	rad54b	99	83.702	ENSNBRG00000013394	rad54b	97	87.374	Neolamprologus_brichardi
ENSSMAG00000018659	rad54b	99	53.651	ENSNLEG00000003062	-	99	57.830	Nomascus_leucogenys
ENSSMAG00000018659	rad54b	73	63.077	ENSMEUG00000012426	-	69	63.077	Notamacropus_eugenii
ENSSMAG00000018659	rad54b	73	76.087	ENSODEG00000002650	-	92	76.087	Octodon_degus
ENSSMAG00000018659	rad54b	99	54.254	ENSODEG00000019564	-	99	54.065	Octodon_degus
ENSSMAG00000018659	rad54b	99	85.500	ENSONIG00000006067	rad54b	99	83.351	Oreochromis_niloticus
ENSSMAG00000018659	rad54b	86	59.814	ENSOANG00000011348	-	99	60.185	Ornithorhynchus_anatinus
ENSSMAG00000018659	rad54b	99	54.426	ENSOCUG00000016478	-	99	53.712	Oryctolagus_cuniculus
ENSSMAG00000018659	rad54b	99	80.593	ENSORLG00000008918	rad54b	99	85.381	Oryzias_latipes
ENSSMAG00000018659	rad54b	74	84.137	ENSORLG00020012171	rad54b	99	85.226	Oryzias_latipes_hni
ENSSMAG00000018659	rad54b	99	80.123	ENSORLG00015018536	rad54b	99	78.178	Oryzias_latipes_hsok
ENSSMAG00000018659	rad54b	89	82.597	ENSOMEG00000004345	rad54b	99	83.658	Oryzias_melastigma
ENSSMAG00000018659	rad54b	99	53.348	ENSOGAG00000007854	-	99	51.852	Otolemur_garnettii
ENSSMAG00000018659	rad54b	91	59.000	ENSOARG00000007691	-	97	59.000	Ovis_aries
ENSSMAG00000018659	rad54b	99	52.793	ENSPPAG00000029572	-	99	52.169	Pan_paniscus
ENSSMAG00000018659	rad54b	100	53.680	ENSPPRG00000007571	-	99	58.333	Panthera_pardus
ENSSMAG00000018659	rad54b	83	58.333	ENSPTIG00000012670	-	99	58.333	Panthera_tigris_altaica
ENSSMAG00000018659	rad54b	99	53.787	ENSPTRG00000020427	-	99	57.967	Pan_troglodytes
ENSSMAG00000018659	rad54b	99	53.432	ENSPANG00000019566	-	99	53.010	Papio_anubis
ENSSMAG00000018659	rad54b	99	62.618	ENSPKIG00000014974	rad54b	99	62.513	Paramormyrops_kingsleyae
ENSSMAG00000018659	rad54b	99	56.059	ENSPSIG00000002383	-	95	61.461	Pelodiscus_sinensis
ENSSMAG00000018659	rad54b	99	54.821	ENSPEMG00000012133	Rad54b	99	54.709	Peromyscus_maniculatus_bairdii
ENSSMAG00000018659	rad54b	90	57.975	ENSPMAG00000002916	rad54b	98	58.333	Petromyzon_marinus
ENSSMAG00000018659	rad54b	93	57.811	ENSPCIG00000020151	-	91	58.906	Phascolarctos_cinereus
ENSSMAG00000018659	rad54b	99	83.270	ENSPFOG00000023411	rad54b	99	79.427	Poecilia_formosa
ENSSMAG00000018659	rad54b	99	83.019	ENSPLAG00000010430	rad54b	99	79.109	Poecilia_latipinna
ENSSMAG00000018659	rad54b	99	83.270	ENSPMEG00000016873	rad54b	99	82.000	Poecilia_mexicana
ENSSMAG00000018659	rad54b	99	83.019	ENSPREG00000018443	rad54b	99	82.509	Poecilia_reticulata
ENSSMAG00000018659	rad54b	99	54.066	ENSPPYG00000018750	-	99	53.284	Pongo_abelii
ENSSMAG00000018659	rad54b	99	53.779	ENSPCOG00000026845	-	99	57.418	Propithecus_coquereli
ENSSMAG00000018659	rad54b	86	56.441	ENSPVAG00000000261	-	86	56.707	Pteropus_vampyrus
ENSSMAG00000018659	rad54b	91	83.965	ENSPNYG00000018303	rad54b	96	85.120	Pundamilia_nyererei
ENSSMAG00000018659	rad54b	99	64.576	ENSPNAG00000000295	rad54b	99	64.576	Pygocentrus_nattereri
ENSSMAG00000018659	rad54b	99	54.871	ENSRNOG00000039949	Rad54b	99	54.770	Rattus_norvegicus
ENSSMAG00000018659	rad54b	99	53.432	ENSRBIG00000020419	-	99	53.450	Rhinopithecus_bieti
ENSSMAG00000018659	rad54b	99	53.432	ENSRROG00000039897	-	99	53.450	Rhinopithecus_roxellana
ENSSMAG00000018659	rad54b	89	36.374	YBR073W	RDH54	80	37.624	Saccharomyces_cerevisiae
ENSSMAG00000018659	rad54b	99	54.396	ENSSBOG00000028501	-	99	53.814	Saimiri_boliviensis_boliviensis
ENSSMAG00000018659	rad54b	99	54.705	ENSSHAG00000017038	-	99	54.705	Sarcophilus_harrisii
ENSSMAG00000018659	rad54b	66	71.655	ENSSFOG00015008483	rad54b	90	71.655	Scleropages_formosus
ENSSMAG00000018659	rad54b	97	88.743	ENSSDUG00000001122	rad54b	96	88.743	Seriola_dumerili
ENSSMAG00000018659	rad54b	99	88.771	ENSSLDG00000013787	rad54b	99	88.771	Seriola_lalandi_dorsalis
ENSSMAG00000018659	rad54b	99	58.212	ENSSPUG00000016497	-	99	58.184	Sphenodon_punctatus
ENSSMAG00000018659	rad54b	99	83.732	ENSSPAG00000012800	rad54b	98	86.358	Stegastes_partitus
ENSSMAG00000018659	rad54b	99	54.696	ENSSSCG00000006101	-	98	58.742	Sus_scrofa
ENSSMAG00000018659	rad54b	99	56.725	ENSTGUG00000011880	-	99	55.556	Taeniopygia_guttata
ENSSMAG00000018659	rad54b	98	81.398	ENSTRUG00000010015	rad54b	99	78.730	Takifugu_rubripes
ENSSMAG00000018659	rad54b	99	50.437	ENSTTRG00000006312	-	99	49.526	Tursiops_truncatus
ENSSMAG00000018659	rad54b	99	54.167	ENSUMAG00000016401	-	99	53.838	Ursus_maritimus
ENSSMAG00000018659	rad54b	99	54.684	ENSVPAG00000003157	-	87	59.598	Vicugna_pacos
ENSSMAG00000018659	rad54b	99	49.279	ENSXETG00000025924	rad54b	98	52.956	Xenopus_tropicalis
ENSSMAG00000018659	rad54b	99	79.953	ENSXMAG00000013141	rad54b	98	86.486	Xiphophorus_maculatus