EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000018718 (Gene tree)
Gene ID: -
Gene Symbol: sfswap
Alias: sfrs8|srsf8|zgc:56184
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 47237 bases
Position: chr16:6131653-6178889
Accession: ZDB-GENE-040426-931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000030535	DRY_EERY	PF09750.9	1.1e-30	1	1
ENSSMAP00000030535	Surp	PF01805.20	6.7e-29	1	2
ENSSMAP00000030535	Surp	PF01805.20	6.7e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000030911	-	6620	-	ENSSMAP00000030535	962 (aa)	-	A0A2U9CGD4

Gene Model

Click here to download ENSSMAG00000018718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000018718's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000018718	sfswap	97	51.796	ENSG00000061936	SFSWAP	94	59.649	Homo_sapiens
ENSSMAG00000018718	sfswap	81	97.826	ENSAPOG00000005784	sfswap	75	97.826	Acanthochromis_polyacanthus
ENSSMAG00000018718	sfswap	68	58.215	ENSAMEG00000013818	SFSWAP	71	59.149	Ailuropoda_melanoleuca
ENSSMAG00000018718	sfswap	76	81.259	ENSAOCG00000016469	sfswap	75	81.122	Amphiprion_ocellaris
ENSSMAG00000018718	sfswap	76	81.532	ENSAPEG00000004965	sfswap	76	81.259	Amphiprion_percula
ENSSMAG00000018718	sfswap	76	82.923	ENSATEG00000021053	sfswap	79	82.650	Anabas_testudineus
ENSSMAG00000018718	sfswap	64	57.014	ENSACAG00000007220	SFSWAP	72	57.250	Anolis_carolinensis
ENSSMAG00000018718	sfswap	97	51.748	ENSANAG00000001518	SFSWAP	71	59.800	Aotus_nancymaae
ENSSMAG00000018718	sfswap	76	79.235	ENSACLG00000020159	sfswap	79	79.098	Astatotilapia_calliptera
ENSSMAG00000018718	sfswap	70	65.503	ENSAMXG00000008657	sfswap	72	67.278	Astyanax_mexicanus
ENSSMAG00000018718	sfswap	83	59.486	ENSBTAG00000000439	SFSWAP	78	60.000	Bos_taurus
ENSSMAG00000018718	sfswap	97	52.096	ENSCJAG00000003613	SFSWAP	74	59.659	Callithrix_jacchus
ENSSMAG00000018718	sfswap	67	60.029	ENSCAFG00000006625	SFSWAP	78	60.492	Canis_familiaris
ENSSMAG00000018718	sfswap	87	46.358	ENSCAFG00020011254	SFSWAP	66	56.272	Canis_lupus_dingo
ENSSMAG00000018718	sfswap	68	58.773	ENSCHIG00000008838	SFSWAP	78	59.371	Capra_hircus
ENSSMAG00000018718	sfswap	60	65.963	ENSTSYG00000010303	SFSWAP	78	60.086	Carlito_syrichta
ENSSMAG00000018718	sfswap	97	51.394	ENSCPOG00000005280	SFSWAP	78	60.057	Cavia_porcellus
ENSSMAG00000018718	sfswap	52	46.223	ENSCCAG00000037255	SFSWAP	71	59.716	Cebus_capucinus
ENSSMAG00000018718	sfswap	52	45.863	ENSCATG00000031094	SFSWAP	71	59.517	Cercocebus_atys
ENSSMAG00000018718	sfswap	52	45.504	ENSCSAG00000001884	SFSWAP	71	59.602	Chlorocebus_sabaeus
ENSSMAG00000018718	sfswap	63	63.393	ENSCHOG00000003578	SFSWAP	64	61.111	Choloepus_hoffmanni
ENSSMAG00000018718	sfswap	70	55.911	ENSCPBG00000024757	SFSWAP	69	58.567	Chrysemys_picta_bellii
ENSSMAG00000018718	sfswap	97	51.545	ENSCANG00000036501	SFSWAP	71	59.375	Colobus_angolensis_palliatus
ENSSMAG00000018718	sfswap	77	64.267	ENSCGRG00001011284	Sfswap	82	56.739	Cricetulus_griseus_chok1gshd
ENSSMAG00000018718	sfswap	77	64.267	ENSCGRG00000017417	Sfswap	75	56.662	Cricetulus_griseus_crigri
ENSSMAG00000018718	sfswap	77	79.759	ENSCSEG00000003773	sfswap	76	79.783	Cynoglossus_semilaevis
ENSSMAG00000018718	sfswap	71	60.901	ENSCVAG00000001205	-	70	69.231	Cyprinodon_variegatus
ENSSMAG00000018718	sfswap	71	68.118	ENSDARG00000005980	sfswap	73	67.511	Danio_rerio
ENSSMAG00000018718	sfswap	68	59.344	ENSDNOG00000018742	SFSWAP	81	58.711	Dasypus_novemcinctus
ENSSMAG00000018718	sfswap	97	46.054	ENSDORG00000010352	Sfswap	71	54.257	Dipodomys_ordii
ENSSMAG00000018718	sfswap	59	97.778	ENSETEG00000016657	-	59	97.778	Echinops_telfairi
ENSSMAG00000018718	sfswap	55	38.720	ENSEBUG00000016748	SFSWAP	72	38.905	Eptatretus_burgeri
ENSSMAG00000018718	sfswap	97	51.305	ENSEASG00005016502	SFSWAP	71	60.399	Equus_asinus_asinus
ENSSMAG00000018718	sfswap	97	49.615	ENSECAG00000007657	SFSWAP	72	60.399	Equus_caballus
ENSSMAG00000018718	sfswap	76	65.946	ENSEEUG00000001713	SFSWAP	55	66.120	Erinaceus_europaeus
ENSSMAG00000018718	sfswap	90	66.492	ENSELUG00000010942	sfswap	94	64.317	Esox_lucius
ENSSMAG00000018718	sfswap	97	52.309	ENSFCAG00000010778	SFSWAP	70	61.063	Felis_catus
ENSSMAG00000018718	sfswap	67	58.250	ENSFALG00000009577	SFSWAP	73	57.182	Ficedula_albicollis
ENSSMAG00000018718	sfswap	97	50.749	ENSFDAG00000017235	SFSWAP	71	59.091	Fukomys_damarensis
ENSSMAG00000018718	sfswap	51	46.266	ENSGALG00000002487	SFSWAP	79	58.956	Gallus_gallus
ENSSMAG00000018718	sfswap	77	76.423	ENSGAFG00000006272	sfswap	79	77.217	Gambusia_affinis
ENSSMAG00000018718	sfswap	82	69.041	ENSGACG00000017647	sfswap	83	67.397	Gasterosteus_aculeatus
ENSSMAG00000018718	sfswap	70	57.024	ENSGAGG00000002611	SFSWAP	69	58.956	Gopherus_agassizii
ENSSMAG00000018718	sfswap	76	78.962	ENSHBUG00000005629	sfswap	78	78.825	Haplochromis_burtoni
ENSSMAG00000018718	sfswap	89	64.211	ENSHGLG00000019216	SFSWAP	70	60.173	Heterocephalus_glaber_female
ENSSMAG00000018718	sfswap	89	64.380	ENSHGLG00100019350	SFSWAP	70	59.798	Heterocephalus_glaber_male
ENSSMAG00000018718	sfswap	100	70.558	ENSHCOG00000009475	sfswap	77	74.595	Hippocampus_comes
ENSSMAG00000018718	sfswap	69	65.205	ENSIPUG00000010598	sfswap	85	62.219	Ictalurus_punctatus
ENSSMAG00000018718	sfswap	68	57.746	ENSJJAG00000006609	Sfswap	72	58.310	Jaculus_jaculus
ENSSMAG00000018718	sfswap	76	78.290	ENSKMAG00000013168	sfswap	75	78.562	Kryptolebias_marmoratus
ENSSMAG00000018718	sfswap	73	81.728	ENSLBEG00000010239	sfswap	78	81.445	Labrus_bergylta
ENSSMAG00000018718	sfswap	68	56.534	ENSLACG00000018678	SFSWAP	70	57.386	Latimeria_chalumnae
ENSSMAG00000018718	sfswap	51	46.801	ENSLAFG00000014462	SFSWAP	76	57.709	Loxodonta_africana
ENSSMAG00000018718	sfswap	95	51.116	ENSMFAG00000037352	SFSWAP	62	59.772	Macaca_fascicularis
ENSSMAG00000018718	sfswap	97	51.645	ENSMMUG00000020343	SFSWAP	71	59.659	Macaca_mulatta
ENSSMAG00000018718	sfswap	97	51.645	ENSMNEG00000041002	SFSWAP	71	59.659	Macaca_nemestrina
ENSSMAG00000018718	sfswap	97	50.500	ENSMLEG00000035728	SFSWAP	71	57.917	Mandrillus_leucophaeus
ENSSMAG00000018718	sfswap	76	84.082	ENSMAMG00000006631	sfswap	77	83.810	Mastacembelus_armatus
ENSSMAG00000018718	sfswap	76	79.235	ENSMZEG00005017834	SFSWAP	76	79.098	Maylandia_zebra
ENSSMAG00000018718	sfswap	51	42.809	ENSMGAG00000002191	SFSWAP	79	57.746	Meleagris_gallopavo
ENSSMAG00000018718	sfswap	77	65.172	ENSMOCG00000014390	Sfswap	71	58.956	Microtus_ochrogaster
ENSSMAG00000018718	sfswap	56	60.241	ENSMODG00000015581	SFSWAP	68	53.343	Monodelphis_domestica
ENSSMAG00000018718	sfswap	86	93.182	ENSMALG00000012603	sfswap	82	81.421	Monopterus_albus
ENSSMAG00000018718	sfswap	89	65.172	MGP_CAROLIEiJ_G0027780	Sfswap	67	75.309	Mus_caroli
ENSSMAG00000018718	sfswap	89	65.699	ENSMUSG00000029439	Sfswap	67	75.309	Mus_musculus
ENSSMAG00000018718	sfswap	89	65.172	MGP_PahariEiJ_G0024360	Sfswap	67	75.309	Mus_pahari
ENSSMAG00000018718	sfswap	54	65.699	MGP_SPRETEiJ_G0028779	Sfswap	67	75.309	Mus_spretus
ENSSMAG00000018718	sfswap	97	51.205	ENSMPUG00000002218	SFSWAP	70	60.029	Mustela_putorius_furo
ENSSMAG00000018718	sfswap	72	56.486	ENSMLUG00000011296	SFSWAP	78	58.546	Myotis_lucifugus
ENSSMAG00000018718	sfswap	70	78.519	ENSNBRG00000020857	sfswap	73	78.806	Neolamprologus_brichardi
ENSSMAG00000018718	sfswap	95	51.371	ENSNLEG00000008386	SFSWAP	72	60.658	Nomascus_leucogenys
ENSSMAG00000018718	sfswap	61	64.456	ENSOPRG00000006983	-	71	60.236	Ochotona_princeps
ENSSMAG00000018718	sfswap	88	70.794	ENSONIG00000003757	sfswap	86	73.600	Oreochromis_niloticus
ENSSMAG00000018718	sfswap	61	64.644	ENSOCUG00000002165	SFSWAP	72	59.275	Oryctolagus_cuniculus
ENSSMAG00000018718	sfswap	76	76.463	ENSORLG00000010983	sfswap	77	77.038	Oryzias_latipes
ENSSMAG00000018718	sfswap	76	76.871	ENSORLG00020010779	sfswap	77	77.446	Oryzias_latipes_hni
ENSSMAG00000018718	sfswap	76	77.038	ENSORLG00015023093	sfswap	77	77.612	Oryzias_latipes_hsok
ENSSMAG00000018718	sfswap	74	78.691	ENSOMEG00000022065	sfswap	77	77.839	Oryzias_melastigma
ENSSMAG00000018718	sfswap	76	65.172	ENSOGAG00000016724	SFSWAP	79	60.173	Otolemur_garnettii
ENSSMAG00000018718	sfswap	61	65.969	ENSOARG00000014314	SFSWAP	78	59.514	Ovis_aries
ENSSMAG00000018718	sfswap	52	45.863	ENSPPAG00000036706	SFSWAP	73	59.547	Pan_paniscus
ENSSMAG00000018718	sfswap	97	50.677	ENSPPRG00000017318	SFSWAP	84	57.294	Panthera_pardus
ENSSMAG00000018718	sfswap	96	48.361	ENSPTIG00000004304	SFSWAP	77	65.344	Panthera_tigris_altaica
ENSSMAG00000018718	sfswap	52	45.863	ENSPANG00000019737	SFSWAP	71	59.517	Papio_anubis
ENSSMAG00000018718	sfswap	70	64.235	ENSPKIG00000008327	sfswap	73	65.149	Paramormyrops_kingsleyae
ENSSMAG00000018718	sfswap	77	65.172	ENSPEMG00000001237	Sfswap	71	58.228	Peromyscus_maniculatus_bairdii
ENSSMAG00000018718	sfswap	56	66.667	ENSPCIG00000006062	SFSWAP	76	57.819	Phascolarctos_cinereus
ENSSMAG00000018718	sfswap	76	77.415	ENSPFOG00000019657	sfswap	77	78.202	Poecilia_formosa
ENSSMAG00000018718	sfswap	76	77.415	ENSPLAG00000008513	sfswap	77	78.202	Poecilia_latipinna
ENSSMAG00000018718	sfswap	76	77.657	ENSPMEG00000008716	sfswap	78	78.338	Poecilia_mexicana
ENSSMAG00000018718	sfswap	76	77.279	ENSPREG00000006692	sfswap	77	78.065	Poecilia_reticulata
ENSSMAG00000018718	sfswap	51	45.290	ENSPPYG00000005129	SFSWAP	72	59.744	Pongo_abelii
ENSSMAG00000018718	sfswap	51	58.964	ENSPCAG00000004977	-	57	62.227	Procavia_capensis
ENSSMAG00000018718	sfswap	51	45.273	ENSPCOG00000023786	SFSWAP	71	58.956	Propithecus_coquereli
ENSSMAG00000018718	sfswap	58	77.778	ENSPVAG00000014918	SFSWAP	57	95.745	Pteropus_vampyrus
ENSSMAG00000018718	sfswap	76	79.127	ENSPNYG00000012660	sfswap	74	78.718	Pundamilia_nyererei
ENSSMAG00000018718	sfswap	71	65.272	ENSPNAG00000007073	sfswap	73	67.556	Pygocentrus_nattereri
ENSSMAG00000018718	sfswap	60	65.172	ENSRNOG00000000931	Sfswap	98	46.311	Rattus_norvegicus
ENSSMAG00000018718	sfswap	97	50.309	ENSRBIG00000036330	SFSWAP	69	59.520	Rhinopithecus_bieti
ENSSMAG00000018718	sfswap	52	46.390	ENSRROG00000032001	SFSWAP	79	59.659	Rhinopithecus_roxellana
ENSSMAG00000018718	sfswap	90	66.491	ENSSBOG00000026217	SFSWAP	79	59.803	Saimiri_boliviensis_boliviensis
ENSSMAG00000018718	sfswap	66	67.727	ENSSFOG00015000766	sfswap	70	67.576	Scleropages_formosus
ENSSMAG00000018718	sfswap	77	86.721	ENSSDUG00000021680	sfswap	75	86.450	Seriola_dumerili
ENSSMAG00000018718	sfswap	77	86.450	ENSSLDG00000010835	sfswap	74	86.179	Seriola_lalandi_dorsalis
ENSSMAG00000018718	sfswap	69	71.429	ENSSARG00000000424	SFSWAP	81	59.366	Sorex_araneus
ENSSMAG00000018718	sfswap	57	53.500	ENSSPUG00000010272	SFSWAP	69	55.241	Sphenodon_punctatus
ENSSMAG00000018718	sfswap	75	80.933	ENSSPAG00000014310	sfswap	74	80.816	Stegastes_partitus
ENSSMAG00000018718	sfswap	76	56.235	ENSSSCG00000009744	SFSWAP	72	60.226	Sus_scrofa
ENSSMAG00000018718	sfswap	97	52.248	ENSTGUG00000004623	SFSWAP	73	58.699	Taeniopygia_guttata
ENSSMAG00000018718	sfswap	72	80.488	ENSTTRG00000013478	SFSWAP	64	64.160	Tursiops_truncatus
ENSSMAG00000018718	sfswap	97	49.439	ENSUAMG00000016807	SFSWAP	71	58.890	Ursus_americanus
ENSSMAG00000018718	sfswap	64	67.723	ENSUMAG00000002957	SFSWAP	73	56.268	Ursus_maritimus
ENSSMAG00000018718	sfswap	67	60.029	ENSVVUG00000010753	SFSWAP	70	60.580	Vulpes_vulpes
ENSSMAG00000018718	sfswap	83	54.261	ENSXETG00000009350	sfswap	88	57.245	Xenopus_tropicalis
ENSSMAG00000018718	sfswap	76	77.899	ENSXMAG00000009020	sfswap	77	78.581	Xiphophorus_maculatus