EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000018818 (Gene tree)
Gene ID: -
Gene Symbol: rab20
Alias: fb01f02|wu:fb01f02|wu:fj82g08|zgc:64047
Full Name: RAB20%2C member RAS oncogene family
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 3450 bases
Position: chr14:14823290-14826739
Accession: ZDB-GENE-030131-9143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000030693	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000031070	-	768	-	ENSSMAP00000030693	255 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000018818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000018818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000018818	rab20	50	36.842	ENSSMAG00000007323	rab5c	60	36.842
ENSSMAG00000018818	rab20	50	33.088	ENSSMAG00000019926	rab34b	58	33.088
ENSSMAG00000018818	rab20	50	33.333	ENSSMAG00000000660	rab35b	65	33.333
ENSSMAG00000018818	rab20	50	35.338	ENSSMAG00000016183	rab25b	61	37.795
ENSSMAG00000018818	rab20	50	34.848	ENSSMAG00000018613	-	61	34.848
ENSSMAG00000018818	rab20	50	36.842	ENSSMAG00000010140	rab22a	71	36.842
ENSSMAG00000018818	rab20	64	31.148	ENSSMAG00000009722	rab25a	87	31.148
ENSSMAG00000018818	rab20	50	34.091	ENSSMAG00000016206	rab11al	61	34.091
ENSSMAG00000018818	rab20	50	34.091	ENSSMAG00000004922	rab11bb	61	34.091
ENSSMAG00000018818	rab20	50	39.098	ENSSMAG00000009229	rab5aa	63	39.098
ENSSMAG00000018818	rab20	51	35.821	ENSSMAG00000002500	rab30	67	35.821
ENSSMAG00000018818	rab20	73	31.937	ENSSMAG00000004343	rab34a	66	31.937

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000018818	rab20	100	86.770	ENSATEG00000011117	rab20	100	86.770	Anabas_testudineus
ENSSMAG00000018818	rab20	100	61.569	ENSAPLG00000011744	RAB20	99	61.569	Anas_platyrhynchos
ENSSMAG00000018818	rab20	99	59.055	ENSACAG00000014045	RAB20	99	59.055	Anolis_carolinensis
ENSSMAG00000018818	rab20	100	66.409	ENSAMXG00000003504	rab20	99	67.188	Astyanax_mexicanus
ENSSMAG00000018818	rab20	99	63.386	ENSCPBG00000005866	RAB20	99	63.386	Chrysemys_picta_bellii
ENSSMAG00000018818	rab20	100	80.000	ENSCSEG00000011160	rab20	100	80.000	Cynoglossus_semilaevis
ENSSMAG00000018818	rab20	99	72.047	ENSDARG00000005049	rab20	97	72.047	Danio_rerio
ENSSMAG00000018818	rab20	99	78.599	ENSELUG00000004092	rab20	98	78.599	Esox_lucius
ENSSMAG00000018818	rab20	100	60.769	ENSFALG00000004409	RAB20	99	60.769	Ficedula_albicollis
ENSSMAG00000018818	rab20	100	84.436	ENSGACG00000003527	rab20	100	84.436	Gasterosteus_aculeatus
ENSSMAG00000018818	rab20	100	81.569	ENSHCOG00000013468	rab20	98	81.569	Hippocampus_comes
ENSSMAG00000018818	rab20	100	68.627	ENSIPUG00000018288	RAB20	97	69.767	Ictalurus_punctatus
ENSSMAG00000018818	rab20	100	68.627	ENSIPUG00000000432	RAB20	97	69.767	Ictalurus_punctatus
ENSSMAG00000018818	rab20	99	62.205	ENSLACG00000011001	RAB20	99	62.205	Latimeria_chalumnae
ENSSMAG00000018818	rab20	100	87.938	ENSMAMG00000015214	rab20	98	87.938	Mastacembelus_armatus
ENSSMAG00000018818	rab20	100	78.599	ENSMMOG00000020022	rab20	100	78.599	Mola_mola
ENSSMAG00000018818	rab20	100	59.216	ENSMEUG00000009442	RAB20	99	59.216	Notamacropus_eugenii
ENSSMAG00000018818	rab20	86	49.345	ENSPMAG00000004439	rab20	98	49.345	Petromyzon_marinus
ENSSMAG00000018818	rab20	100	68.235	ENSPNAG00000008867	rab20	99	69.020	Pygocentrus_nattereri
ENSSMAG00000018818	rab20	100	89.883	ENSSDUG00000005148	rab20	98	89.883	Seriola_dumerili
ENSSMAG00000018818	rab20	100	61.569	ENSTGUG00000008797	RAB20	99	61.569	Taeniopygia_guttata
ENSSMAG00000018818	rab20	100	80.545	ENSTRUG00000022951	rab20	98	80.545	Takifugu_rubripes
ENSSMAG00000018818	rab20	95	74.380	ENSTNIG00000013920	rab20	100	73.725	Tetraodon_nigroviridis