EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000018865 (Gene tree)
Gene ID: -
Gene Symbol: polr1c
Alias: zgc:65973
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 3302 bases
Position: chr15:16697984-16701285
Accession: ZDB-GENE-040426-1495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000030780	RNA_pol_A_bac	PF01000.26	2.3e-29	1	1
ENSSMAP00000030780	RNA_pol_L	PF01193.24	1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000031159	-	1035	-	ENSSMAP00000030780	344 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000018865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000018865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000018865	polr1c	99	72.754	ENSG00000171453	POLR1C	100	74.194	Homo_sapiens
ENSSMAG00000018865	polr1c	100	87.179	ENSAPOG00000024356	polr1c	100	88.319	Acanthochromis_polyacanthus
ENSSMAG00000018865	polr1c	99	73.043	ENSAMEG00000012205	POLR1C	99	73.043	Ailuropoda_melanoleuca
ENSSMAG00000018865	polr1c	94	75.529	ENSACIG00000016268	polr1c	91	76.737	Amphilophus_citrinellus
ENSSMAG00000018865	polr1c	100	86.325	ENSAOCG00000011687	polr1c	97	87.464	Amphiprion_ocellaris
ENSSMAG00000018865	polr1c	100	87.179	ENSAPEG00000002433	polr1c	100	88.319	Amphiprion_percula
ENSSMAG00000018865	polr1c	99	90.258	ENSATEG00000005985	polr1c	99	90.258	Anabas_testudineus
ENSSMAG00000018865	polr1c	86	72.667	ENSAPLG00000002908	POLR1C	100	72.667	Anas_platyrhynchos
ENSSMAG00000018865	polr1c	89	73.701	ENSACAG00000009764	POLR1C	88	73.701	Anolis_carolinensis
ENSSMAG00000018865	polr1c	99	73.043	ENSANAG00000025805	POLR1C	99	73.043	Aotus_nancymaae
ENSSMAG00000018865	polr1c	100	88.604	ENSACLG00000006573	polr1c	100	89.744	Astatotilapia_calliptera
ENSSMAG00000018865	polr1c	100	83.285	ENSAMXG00000012062	polr1c	99	83.285	Astyanax_mexicanus
ENSSMAG00000018865	polr1c	99	73.333	ENSBTAG00000018969	POLR1C	99	73.333	Bos_taurus
ENSSMAG00000018865	polr1c	92	46.450	WBGene00019275	rpac-40	92	46.450	Caenorhabditis_elegans
ENSSMAG00000018865	polr1c	99	72.464	ENSCJAG00000005594	POLR1C	99	72.464	Callithrix_jacchus
ENSSMAG00000018865	polr1c	99	73.043	ENSCAFG00000001872	POLR1C	99	73.043	Canis_familiaris
ENSSMAG00000018865	polr1c	99	73.043	ENSCAFG00020012018	POLR1C	99	73.043	Canis_lupus_dingo
ENSSMAG00000018865	polr1c	99	72.832	ENSCHIG00000004352	POLR1C	99	72.832	Capra_hircus
ENSSMAG00000018865	polr1c	99	73.043	ENSTSYG00000011921	POLR1C	99	73.043	Carlito_syrichta
ENSSMAG00000018865	polr1c	86	73.913	ENSCAPG00000015364	POLR1C	88	73.913	Cavia_aperea
ENSSMAG00000018865	polr1c	99	73.623	ENSCPOG00000038098	POLR1C	99	73.623	Cavia_porcellus
ENSSMAG00000018865	polr1c	99	72.754	ENSCCAG00000020169	POLR1C	99	72.754	Cebus_capucinus
ENSSMAG00000018865	polr1c	99	72.754	ENSCATG00000044045	POLR1C	99	72.754	Cercocebus_atys
ENSSMAG00000018865	polr1c	60	30.093	ENSCLAG00000013676	POLR2C	52	30.093	Chinchilla_lanigera
ENSSMAG00000018865	polr1c	99	73.913	ENSCLAG00000009266	POLR1C	99	73.913	Chinchilla_lanigera
ENSSMAG00000018865	polr1c	99	71.884	ENSCSAG00000011913	POLR1C	99	71.884	Chlorocebus_sabaeus
ENSSMAG00000018865	polr1c	62	68.868	ENSCHOG00000006601	POLR1C	100	68.868	Choloepus_hoffmanni
ENSSMAG00000018865	polr1c	99	75.942	ENSCPBG00000025203	POLR1C	99	75.942	Chrysemys_picta_bellii
ENSSMAG00000018865	polr1c	98	56.891	ENSCING00000003563	-	98	56.891	Ciona_intestinalis
ENSSMAG00000018865	polr1c	99	72.754	ENSCANG00000043167	POLR1C	99	72.754	Colobus_angolensis_palliatus
ENSSMAG00000018865	polr1c	99	71.884	ENSCGRG00001017533	Polr1c	99	71.884	Cricetulus_griseus_chok1gshd
ENSSMAG00000018865	polr1c	86	72.575	ENSCGRG00000013225	Polr1c	100	72.575	Cricetulus_griseus_crigri
ENSSMAG00000018865	polr1c	100	88.439	ENSCSEG00000018097	polr1c	100	88.439	Cynoglossus_semilaevis
ENSSMAG00000018865	polr1c	62	89.623	ENSCVAG00000005684	polr1c	88	87.783	Cyprinodon_variegatus
ENSSMAG00000018865	polr1c	100	83.285	ENSDARG00000039400	polr1c	96	83.285	Danio_rerio
ENSSMAG00000018865	polr1c	99	74.203	ENSDNOG00000042693	POLR1C	99	74.203	Dasypus_novemcinctus
ENSSMAG00000018865	polr1c	99	73.623	ENSDORG00000000429	Polr1c	99	73.623	Dipodomys_ordii
ENSSMAG00000018865	polr1c	90	52.866	FBgn0031657	CG3756	93	52.866	Drosophila_melanogaster
ENSSMAG00000018865	polr1c	99	69.855	ENSETEG00000010807	POLR1C	99	69.855	Echinops_telfairi
ENSSMAG00000018865	polr1c	99	68.696	ENSEBUG00000013725	polr1c	99	68.696	Eptatretus_burgeri
ENSSMAG00000018865	polr1c	99	72.754	ENSEASG00005003338	POLR1C	99	72.754	Equus_asinus_asinus
ENSSMAG00000018865	polr1c	99	72.754	ENSECAG00000023516	POLR1C	98	72.754	Equus_caballus
ENSSMAG00000018865	polr1c	99	74.203	ENSEEUG00000005471	POLR1C	99	74.203	Erinaceus_europaeus
ENSSMAG00000018865	polr1c	100	83.862	ENSELUG00000013027	polr1c	100	83.862	Esox_lucius
ENSSMAG00000018865	polr1c	99	73.333	ENSFCAG00000009735	POLR1C	99	73.333	Felis_catus
ENSSMAG00000018865	polr1c	93	73.065	ENSFALG00000012111	POLR1C	100	73.065	Ficedula_albicollis
ENSSMAG00000018865	polr1c	99	73.043	ENSFDAG00000008428	POLR1C	99	73.043	Fukomys_damarensis
ENSSMAG00000018865	polr1c	100	74.566	ENSFHEG00000000262	polr1c	100	75.145	Fundulus_heteroclitus
ENSSMAG00000018865	polr1c	93	83.282	ENSGMOG00000013878	polr1c	100	83.282	Gadus_morhua
ENSSMAG00000018865	polr1c	99	73.043	ENSGALG00000010349	POLR1C	99	73.043	Gallus_gallus
ENSSMAG00000018865	polr1c	100	86.610	ENSGAFG00000010153	polr1c	100	86.610	Gambusia_affinis
ENSSMAG00000018865	polr1c	100	84.330	ENSGACG00000002453	polr1c	100	85.470	Gasterosteus_aculeatus
ENSSMAG00000018865	polr1c	98	75.660	ENSGAGG00000010640	POLR1C	99	75.660	Gopherus_agassizii
ENSSMAG00000018865	polr1c	99	72.754	ENSGGOG00000010903	POLR1C	99	72.754	Gorilla_gorilla
ENSSMAG00000018865	polr1c	100	81.844	ENSHBUG00000017816	polr1c	100	81.844	Haplochromis_burtoni
ENSSMAG00000018865	polr1c	99	72.754	ENSHGLG00000019441	POLR1C	99	72.754	Heterocephalus_glaber_female
ENSSMAG00000018865	polr1c	99	73.043	ENSHGLG00100005970	POLR1C	99	73.043	Heterocephalus_glaber_male
ENSSMAG00000018865	polr1c	98	82.319	ENSHCOG00000002179	polr1c	99	82.319	Hippocampus_comes
ENSSMAG00000018865	polr1c	100	83.046	ENSIPUG00000024464	polr1c	100	83.046	Ictalurus_punctatus
ENSSMAG00000018865	polr1c	99	73.043	ENSSTOG00000010631	POLR1C	99	73.043	Ictidomys_tridecemlineatus
ENSSMAG00000018865	polr1c	60	30.093	ENSSTOG00000015150	-	50	30.093	Ictidomys_tridecemlineatus
ENSSMAG00000018865	polr1c	99	73.043	ENSJJAG00000023110	Polr1c	99	73.043	Jaculus_jaculus
ENSSMAG00000018865	polr1c	100	86.610	ENSKMAG00000014305	polr1c	97	86.610	Kryptolebias_marmoratus
ENSSMAG00000018865	polr1c	100	87.464	ENSLBEG00000014925	polr1c	100	88.604	Labrus_bergylta
ENSSMAG00000018865	polr1c	94	58.735	ENSLACG00000012567	POLR1C	98	58.735	Latimeria_chalumnae
ENSSMAG00000018865	polr1c	100	79.827	ENSLOCG00000016710	polr1c	96	79.827	Lepisosteus_oculatus
ENSSMAG00000018865	polr1c	86	74.086	ENSLAFG00000026248	POLR1C	100	74.086	Loxodonta_africana
ENSSMAG00000018865	polr1c	99	72.464	ENSMFAG00000046295	POLR1C	99	72.464	Macaca_fascicularis
ENSSMAG00000018865	polr1c	99	72.464	ENSMMUG00000015192	POLR1C	99	72.464	Macaca_mulatta
ENSSMAG00000018865	polr1c	99	72.464	ENSMNEG00000028073	POLR1C	99	72.464	Macaca_nemestrina
ENSSMAG00000018865	polr1c	99	72.464	ENSMLEG00000034818	POLR1C	99	72.464	Mandrillus_leucophaeus
ENSSMAG00000018865	polr1c	100	88.889	ENSMAMG00000008700	polr1c	100	88.889	Mastacembelus_armatus
ENSSMAG00000018865	polr1c	100	88.319	ENSMZEG00005018545	polr1c	100	89.459	Maylandia_zebra
ENSSMAG00000018865	polr1c	84	69.759	ENSMGAG00000011020	POLR1C	100	69.759	Meleagris_gallopavo
ENSSMAG00000018865	polr1c	99	71.884	ENSMAUG00000014329	Polr1c	99	71.884	Mesocricetus_auratus
ENSSMAG00000018865	polr1c	99	71.304	ENSMICG00000005027	POLR1C	99	71.661	Microcebus_murinus
ENSSMAG00000018865	polr1c	99	72.464	ENSMOCG00000017549	Polr1c	99	72.464	Microtus_ochrogaster
ENSSMAG00000018865	polr1c	100	73.121	ENSMMOG00000005380	polr1c	100	73.699	Mola_mola
ENSSMAG00000018865	polr1c	84	74.227	ENSMODG00000018964	POLR1C	100	74.227	Monodelphis_domestica
ENSSMAG00000018865	polr1c	100	76.081	ENSMALG00000011711	polr1c	100	76.657	Monopterus_albus
ENSSMAG00000018865	polr1c	99	64.058	MGP_CAROLIEiJ_G0021662	Polr1c	100	71.923	Mus_caroli
ENSSMAG00000018865	polr1c	99	73.043	ENSMUSG00000067148	Polr1c	98	75.248	Mus_musculus
ENSSMAG00000018865	polr1c	99	73.333	MGP_PahariEiJ_G0020654	Polr1c	98	75.248	Mus_pahari
ENSSMAG00000018865	polr1c	99	73.043	MGP_SPRETEiJ_G0022574	Polr1c	98	75.248	Mus_spretus
ENSSMAG00000018865	polr1c	99	72.754	ENSMPUG00000012916	POLR1C	91	72.754	Mustela_putorius_furo
ENSSMAG00000018865	polr1c	99	73.043	ENSMLUG00000017751	POLR1C	99	73.043	Myotis_lucifugus
ENSSMAG00000018865	polr1c	99	72.754	ENSNGAG00000023487	Polr1c	100	73.540	Nannospalax_galili
ENSSMAG00000018865	polr1c	100	88.319	ENSNBRG00000018742	polr1c	100	89.459	Neolamprologus_brichardi
ENSSMAG00000018865	polr1c	99	72.754	ENSNLEG00000004035	POLR1C	99	72.754	Nomascus_leucogenys
ENSSMAG00000018865	polr1c	99	62.319	ENSMEUG00000006778	POLR1C	99	62.319	Notamacropus_eugenii
ENSSMAG00000018865	polr1c	77	72.659	ENSOPRG00000000145	POLR1C	99	72.659	Ochotona_princeps
ENSSMAG00000018865	polr1c	63	69.725	ENSODEG00000017109	-	99	69.725	Octodon_degus
ENSSMAG00000018865	polr1c	99	73.623	ENSODEG00000015831	-	99	73.623	Octodon_degus
ENSSMAG00000018865	polr1c	100	89.174	ENSONIG00000013133	polr1c	98	90.313	Oreochromis_niloticus
ENSSMAG00000018865	polr1c	99	71.014	ENSOANG00000003043	POLR1C	99	71.014	Ornithorhynchus_anatinus
ENSSMAG00000018865	polr1c	99	71.884	ENSOCUG00000005504	POLR1C	99	71.884	Oryctolagus_cuniculus
ENSSMAG00000018865	polr1c	99	82.471	ENSORLG00000019743	polr1c	99	82.471	Oryzias_latipes
ENSSMAG00000018865	polr1c	76	64.855	ENSORLG00020005555	polr1c	81	64.855	Oryzias_latipes_hni
ENSSMAG00000018865	polr1c	99	83.333	ENSORLG00020006489	POLR1C	99	83.333	Oryzias_latipes_hni
ENSSMAG00000018865	polr1c	99	82.471	ENSORLG00015013322	polr1c	99	82.471	Oryzias_latipes_hsok
ENSSMAG00000018865	polr1c	99	83.333	ENSOMEG00000016527	polr1c	99	83.333	Oryzias_melastigma
ENSSMAG00000018865	polr1c	100	71.920	ENSOGAG00000016318	POLR1C	100	71.920	Otolemur_garnettii
ENSSMAG00000018865	polr1c	99	73.043	ENSOARG00000007503	POLR1C	99	73.043	Ovis_aries
ENSSMAG00000018865	polr1c	99	72.754	ENSPPAG00000043678	POLR1C	99	72.754	Pan_paniscus
ENSSMAG00000018865	polr1c	99	73.333	ENSPPRG00000009760	POLR1C	99	73.333	Panthera_pardus
ENSSMAG00000018865	polr1c	99	73.333	ENSPTIG00000014813	POLR1C	99	73.333	Panthera_tigris_altaica
ENSSMAG00000018865	polr1c	99	72.754	ENSPTRG00000018202	POLR1C	99	72.754	Pan_troglodytes
ENSSMAG00000018865	polr1c	99	72.754	ENSPANG00000009025	POLR1C	99	72.754	Papio_anubis
ENSSMAG00000018865	polr1c	100	81.556	ENSPKIG00000009858	polr1c	100	81.556	Paramormyrops_kingsleyae
ENSSMAG00000018865	polr1c	99	75.072	ENSPSIG00000012580	POLR1C	94	75.072	Pelodiscus_sinensis
ENSSMAG00000018865	polr1c	56	31.527	ENSPMGG00000021249	polr2c	77	31.527	Periophthalmus_magnuspinnatus
ENSSMAG00000018865	polr1c	100	73.775	ENSPMGG00000012121	polr1c	100	74.352	Periophthalmus_magnuspinnatus
ENSSMAG00000018865	polr1c	99	71.884	ENSPEMG00000006970	Polr1c	99	71.884	Peromyscus_maniculatus_bairdii
ENSSMAG00000018865	polr1c	55	32.663	ENSPMAG00000004827	polr2c	81	32.663	Petromyzon_marinus
ENSSMAG00000018865	polr1c	99	70.115	ENSPMAG00000005560	polr1c	99	70.115	Petromyzon_marinus
ENSSMAG00000018865	polr1c	99	73.623	ENSPCIG00000028137	POLR1C	98	73.623	Phascolarctos_cinereus
ENSSMAG00000018865	polr1c	100	87.749	ENSPFOG00000014357	polr1c	98	87.749	Poecilia_formosa
ENSSMAG00000018865	polr1c	100	87.749	ENSPFOG00000014342	POLR1C	100	87.749	Poecilia_formosa
ENSSMAG00000018865	polr1c	62	90.094	ENSPLAG00000004111	polr1c	92	88.235	Poecilia_latipinna
ENSSMAG00000018865	polr1c	100	87.749	ENSPMEG00000008420	polr1c	100	87.749	Poecilia_mexicana
ENSSMAG00000018865	polr1c	100	87.749	ENSPMEG00000011877	-	100	87.749	Poecilia_mexicana
ENSSMAG00000018865	polr1c	100	89.017	ENSPREG00000007985	polr1c	100	89.017	Poecilia_reticulata
ENSSMAG00000018865	polr1c	99	72.464	ENSPPYG00000016645	POLR1C	99	72.464	Pongo_abelii
ENSSMAG00000018865	polr1c	99	71.594	ENSPCOG00000024628	POLR1C	99	71.594	Propithecus_coquereli
ENSSMAG00000018865	polr1c	99	67.826	ENSPVAG00000005689	POLR1C	99	67.826	Pteropus_vampyrus
ENSSMAG00000018865	polr1c	100	89.235	ENSPNYG00000003620	polr1c	100	89.744	Pundamilia_nyererei
ENSSMAG00000018865	polr1c	100	83.285	ENSPNAG00000008443	polr1c	100	83.285	Pygocentrus_nattereri
ENSSMAG00000018865	polr1c	99	72.464	ENSRNOG00000019079	Polr1c	99	72.464	Rattus_norvegicus
ENSSMAG00000018865	polr1c	99	72.754	ENSRBIG00000007155	POLR1C	99	72.754	Rhinopithecus_bieti
ENSSMAG00000018865	polr1c	99	72.754	ENSRROG00000000257	POLR1C	99	72.754	Rhinopithecus_roxellana
ENSSMAG00000018865	polr1c	90	47.950	YPR110C	RPC40	94	47.950	Saccharomyces_cerevisiae
ENSSMAG00000018865	polr1c	51	33.152	YIL021W	RPB3	52	33.152	Saccharomyces_cerevisiae
ENSSMAG00000018865	polr1c	99	72.754	ENSSBOG00000025735	POLR1C	99	72.876	Saimiri_boliviensis_boliviensis
ENSSMAG00000018865	polr1c	99	66.087	ENSSHAG00000014456	POLR1C	99	66.087	Sarcophilus_harrisii
ENSSMAG00000018865	polr1c	100	84.150	ENSSFOG00015019860	polr1c	100	84.150	Scleropages_formosus
ENSSMAG00000018865	polr1c	100	90.883	ENSSDUG00000015745	polr1c	91	92.023	Seriola_dumerili
ENSSMAG00000018865	polr1c	100	90.313	ENSSLDG00000018285	polr1c	91	91.453	Seriola_lalandi_dorsalis
ENSSMAG00000018865	polr1c	99	73.392	ENSSPUG00000011822	POLR1C	99	73.392	Sphenodon_punctatus
ENSSMAG00000018865	polr1c	100	86.325	ENSSPAG00000022369	polr1c	100	87.464	Stegastes_partitus
ENSSMAG00000018865	polr1c	99	72.754	ENSSSCG00000028007	POLR1C	98	72.754	Sus_scrofa
ENSSMAG00000018865	polr1c	96	73.795	ENSTGUG00000009159	POLR1C	99	73.795	Taeniopygia_guttata
ENSSMAG00000018865	polr1c	100	84.900	ENSTRUG00000006264	polr1c	100	84.900	Takifugu_rubripes
ENSSMAG00000018865	polr1c	52	71.910	ENSTBEG00000002254	POLR1C	100	71.910	Tupaia_belangeri
ENSSMAG00000018865	polr1c	76	70.722	ENSTTRG00000006344	POLR1C	76	70.722	Tursiops_truncatus
ENSSMAG00000018865	polr1c	99	73.333	ENSUAMG00000025602	POLR1C	99	73.333	Ursus_americanus
ENSSMAG00000018865	polr1c	99	73.333	ENSUMAG00000005938	POLR1C	99	73.333	Ursus_maritimus
ENSSMAG00000018865	polr1c	99	70.725	ENSVVUG00000028922	POLR1C	99	70.725	Vulpes_vulpes
ENSSMAG00000018865	polr1c	99	68.786	ENSXETG00000010882	polr1c	99	68.786	Xenopus_tropicalis
ENSSMAG00000018865	polr1c	60	30.303	ENSXETG00000013784	polr2c	73	30.303	Xenopus_tropicalis
ENSSMAG00000018865	polr1c	100	87.644	ENSXCOG00000014185	polr1c	100	87.644	Xiphophorus_couchianus
ENSSMAG00000018865	polr1c	100	86.895	ENSXMAG00000015076	polr1c	100	86.895	Xiphophorus_maculatus